Cow genome map

Conread name: rret17_p16.y1

Conread position: 57-436
Cow position: chr1:37864229-37864609 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 246
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 17, 45

Conread position: 59-429
Cow position: chr1:40521959-40521587 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 248
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 10, 16

Conread position: 72-415
Cow position: chr1:13270917-13271262 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 224
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 115, 12

Conread position: 77-379
Cow position: chr1:78727586-78727899 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 205
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 68, 17

Conread position: 78-413
Cow position: chr1:30535083-30535421 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 216
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 80, 101

Conread position: 86-457
Cow position: chr1:97912397-97912765 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 237
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 59, 53

Conread position: 90-387
Cow position: chr1:69351052-69351355 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 196
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 93, 73

Conread position: 178-384
Cow position: chr1:81868110-81868317 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 146
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 63, 174

Conread position: 78-385
Cow position: chr10:37103485-37103184 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 196
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 257, 155

Conread position: 79-389
Cow position: chr10:57750079-57750384 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 196
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 306, 21

Conread position: 82-435
Cow position: chr10:8491937-8491594 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 230
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 139, 115

Conread position: 84-379
Cow position: chr10:18823555-18823855 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 194
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 105, 146

Conread position: 84-426
Cow position: chr10:30548473-30548808 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 236
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 78, 20

Conread position: 89-391
Cow position: chr10:3895297-3895601 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 204
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 42, 91

Conread position: 77-407
Cow position: chr11:61485688-61486020 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 218
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 105, 5

Conread position: 78-388
Cow position: chr11:40502346-40502654 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 200
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 88, 60

Conread position: 81-378
Cow position: chr11:59036814-59037097 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 204
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 156, 55

Conread position: 86-372
Cow position: chr11:3367881-3368169 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 184
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 149, 206

Conread position: 138-385
Cow position: chr11:66422016-66421772 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 167
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 30, 41

Conread position: 117-609
Cow position: chr12:33823474-33822996 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 249, 0

Conread position: 56-390
Cow position: chr13:37544367-37544030 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 232
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 129, 23

Conread position: 81-389
Cow position: chr13:41362803-41362497 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 220
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 25, 30

Conread position: 170-372
Cow position: chr13:22266352-22266143 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 147
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 26, 17

Conread position: 172-382
Cow position: chr13:11660363-11660151 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 146
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 7, 178

Conread position: 81-384
Cow position: chr15:12158462-12158766 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 195
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 60, 259

Conread position: 83-372
Cow position: chr15:47663717-47664007 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 195
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 43, 67

Conread position: 86-375
Cow position: chr15:27759481-27759773 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 196
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 91, 78

Conread position: 188-390
Cow position: chr15:25575669-25575869 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 145
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 36, 96

Conread position: 56-413
Cow position: chr16:31504670-31504312 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 235
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 76, 124

Conread position: 76-389
Cow position: chr16:12100803-12100484 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 210
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 19, 65

Conread position: 81-371
Cow position: chr17:18892951-18892664 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 189
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 113, 82

Conread position: 242-389
Cow position: chr17:597708-597857 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 112
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 128, 0

Conread position: 76-414
Cow position: chr18:4540515-4540844 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 215
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 149, 28

Conread position: 84-376
Cow position: chr18:13812966-13812666 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 205
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 45, 136

Conread position: 86-391
Cow position: chr18:51247172-51246856 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 209
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 91, 74

Conread position: 86-412
Cow position: chr18:51300759-51300433 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 219
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 93, 20

Conread position: 118-430
Cow position: chr18:30906026-30905705 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 213
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 82, 33

Conread position: 91-389
Cow position: chr19:9371330-9371041 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 199
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 121, 33

Conread position: 138-377
Cow position: chr19:17659543-17659306 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 166
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 39, 26

Conread position: 74-413
Cow position: chr2:77067512-77067169 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 217
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 16, 61

Conread position: 86-379
Cow position: chr2:83248703-83249000 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 193
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 78, 11

Conread position: 176-406
Cow position: chr20:9389672-9389908 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 162
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 34, 21

Conread position: 56-428
Cow position: chr21:21478422-21478790 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 237
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 174, 25

Conread position: 78-372
Cow position: chr21:27685786-27685489 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 191
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 101, 86

Conread position: 81-357
Cow position: chr21:30848072-30847785 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 191
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 103, 52

Conread position: 82-337
Cow position: chr21:17378500-17378760 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 177
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 6, 53

Conread position: 135-435
Cow position: chr21:2288003-2287701 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 201
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 29, 42

Conread position: 57-383
Cow position: chr22:20963034-20962705 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 214
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 17, 9

Conread position: 210-372
Cow position: chr22:12876752-12876910 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 119
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 65, 28

Conread position: 197-412
Cow position: chr23:30850435-30850657 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 154
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 27, 91

Conread position: 86-364
Cow position: chr24:42385931-42386213 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 183
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 78, 93

Conread position: 74-368
Cow position: chr25:25480401-25480691 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 192
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 170, 102

Conread position: 76-480
Cow position: chr25:14742086-14742479 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 258
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 143, 58

Conread position: 105-393
Cow position: chr25:5278544-5278268 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 198
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 9, 28

Conread position: 70-390
Cow position: chr26:12992325-12992003 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 208
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 7, 110

Conread position: 60-385
Cow position: chr28:24735014-24734684 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 207
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 19, 88

Conread position: 80-335
Cow position: chr28:23278794-23279052 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 181
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 95, 23

Conread position: 81-372
Cow position: chr28:32198863-32198573 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 188
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 161, 93

Conread position: 86-389
Cow position: chr28:21362958-21362654 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 197
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 126, 153

Conread position: 90-430
Cow position: chr28:23916529-23916177 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 227
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 41, 24

Conread position: 243-383
Cow position: chr29:23405036-23405178 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 108
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 57, 112

Conread position: 76-383
Cow position: chr3:18852290-18851992 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 205
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 129, 6

Conread position: 78-378
Cow position: chr3:74874545-74874835 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 194
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 258, 34

Conread position: 78-382
Cow position: chr3:29802150-29801842 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 198
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 163, 7

Conread position: 78-415
Cow position: chr3:41582732-41582393 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 221
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 72, 35

Conread position: 81-353
Cow position: chr3:19830818-19831088 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 178
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 37, 33

Conread position: 81-398
Cow position: chr3:56699312-56699628 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 210
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 111, 83

Conread position: 82-437
Cow position: chr3:57968478-57968121 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 236
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 61, 51

Conread position: 86-382
Cow position: chr3:4794146-4794438 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 200
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 26, 31

Conread position: 87-346
Cow position: chr3:4748280-4748533 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 179
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 137, 24

Conread position: 89-345
Cow position: chr3:13471424-13471675 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 173
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 13, 7

Conread position: 78-352
Cow position: chr4:3082762-3082488 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 184
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 58, 79

Conread position: 82-357
Cow position: chr4:49907187-49906913 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 192
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 30, 34

Conread position: 57-405
Cow position: chr5:16960168-16960507 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 227
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 20, 92

Conread position: 77-388
Cow position: chr5:19738972-19738661 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 201
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 160, 142

Conread position: 86-427
Cow position: chr5:51069443-51069102 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 222
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 26, 30

Conread position: 90-372
Cow position: chr5:15462064-15461779 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 183
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 61, 0

Conread position: 178-416
Cow position: chr5:15414071-15413830 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 163
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 46, 77

Conread position: 78-371
Cow position: chr6:23529333-23529034 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 197
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 32, 38

Conread position: 86-430
Cow position: chr7:40126091-40125749 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 217
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 78, 186

Conread position: 135-377
Cow position: chr7:662774-663015 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 164
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 77, 129

Conread position: 142-472
Cow position: chr7:38136706-38136377 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 226
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 77, 46

Conread position: 75-372
Cow position: chr8:3221614-3221915 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 194
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 130, 85

Conread position: 78-368
Cow position: chr8:29273217-29273508 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 196
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 91, 101

Conread position: 78-389
Cow position: chr8:39048661-39048977 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 206
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 35, 100

Conread position: 78-397
Cow position: chr8:13970609-13970283 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 210
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 12, 7

Conread position: 78-413
Cow position: chr8:56278631-56278299 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 218
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 142, 58

Conread position: 90-415
Cow position: chr9:13117285-13117607 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 209
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 277, 37

Conread position: 56-384
Cow position: chrX:26436977-26436645 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 213
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 20, 122

Conread position: 78-411
Cow position: chrX:13654714-13654379 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 221
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 101, 70

Conread position: 78-413
Cow position: chrX:8807311-8807654 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 218
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 101, 60

Conread position: 78-413
Cow position: chrX:25051698-25052039 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 214
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 130, 98

Conread position: 78-479
Cow position: chrX:23974216-23974622 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 253
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 143, 49

Conread position: 86-440
Cow position: chrX:25456191-25455836 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 224
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 83, 112

Conread position: 88-427
Cow position: chrX:37416378-37416715 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 215
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 136, 191

Conread position: 125-376
Cow position: chrX:24225437-24225693 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 176
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 18, 53