Cow genome map

Conread name: rsag020_g9.y1

Conread position: 36-275
Cow position: chr1:75988082-75987850 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 173
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 109, 21

Conread position: 51-275
Cow position: chr1:66380764-66380983 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 162
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 38, 27

Conread position: 63-289
Cow position: chr1:82500898-82501118 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 166
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 43, 17

Conread position: 43-285
Cow position: chr10:51184834-51185084 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 173
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 65, 35

Conread position: 44-275
Cow position: chr10:54624313-54624538 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 159
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 189, 36

Conread position: 57-268
Cow position: chr10:32991590-32991367 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 163
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 51, 23

Conread position: 79-288
Cow position: chr10:37424842-37425057 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 150
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 37, 24

Conread position: 137-292
Cow position: chr10:36502012-36502162 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 116
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 59, 0

Conread position: 37-275
Cow position: chr11:15187291-15187530 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 165
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 28, 45

Conread position: 43-272
Cow position: chr11:15782689-15782929 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 171
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 21, 41

Conread position: 43-276
Cow position: chr11:59987033-59986793 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 176
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 102, 37

Conread position: 43-296
Cow position: chr11:80159425-80159186 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 184
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 22, 38

Conread position: 65-351
Cow position: chr11:8588032-8588319 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 201
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 43, 17

Conread position: 34-265
Cow position: chr12:25963717-25963946 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 160
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 141, 46

Conread position: 47-290
Cow position: chr12:34100309-34100064 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 166
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 42, 34

Conread position: 57-333
Cow position: chr12:3764630-3764347 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 192
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 41, 23

Conread position: 59-270
Cow position: chr12:3484009-3483809 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 157
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 151, 21

Conread position: 64-276
Cow position: chr12:38464119-38464332 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 147
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 65, 16

Conread position: 38-265
Cow position: chr13:40324149-40323921 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 155
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 70, 25

Conread position: 39-270
Cow position: chr13:49001366-49001607 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 178
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 70, 28

Conread position: 48-275
Cow position: chr13:55178950-55178717 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 171
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 71, 23

Conread position: 53-248
Cow position: chr13:47742061-47741874 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 140
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 55, 27

Conread position: 56-302
Cow position: chr13:9339080-9338832 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 176
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 34, 23

Conread position: 35-266
Cow position: chr14:3814950-3815178 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 160
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 73, 43

Conread position: 42-292
Cow position: chr14:49901188-49901429 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 176
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 66, 38

Conread position: 145-331
Cow position: chr14:19116361-19116554 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 140
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 60, 47

Conread position: 34-275
Cow position: chr15:13085776-13085529 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 167
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 6, 45

Conread position: 38-271
Cow position: chr15:23741714-23741947 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 163
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 70, 44

Conread position: 63-298
Cow position: chr15:12645196-12645422 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 161
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 151, 17

Conread position: 37-285
Cow position: chr16:18547415-18547169 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 168
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 29, 24

Conread position: 42-271
Cow position: chr17:33439343-33439113 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 161
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 61, 40

Conread position: 43-341
Cow position: chr17:26618636-26618339 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 199
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 103, 37

Conread position: 43-363
Cow position: chr17:11176498-11176188 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 214
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 169, 37

Conread position: 74-296
Cow position: chr17:38407223-38406998 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 158
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 34, 120

Conread position: 3-411
Cow position: chr18:28281941-28282339 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 128

Conread position: 39-270
Cow position: chr18:46889226-46889457 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 164
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 168, 41

Conread position: 42-271
Cow position: chr18:11239926-11239695 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 164
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 54, 36

Conread position: 43-341
Cow position: chr18:24302324-24302019 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 205
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 65, 37

Conread position: 59-265
Cow position: chr18:15198031-15198235 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 148
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 22, 60

Conread position: 37-290
Cow position: chr19:52443090-52443349 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 190
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 69, 43

Conread position: 43-275
Cow position: chr19:4299046-4299271 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 162
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 82, 37

Conread position: 43-275
Cow position: chr19:14354504-14354744 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 163
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 83, 37

Conread position: 51-265
Cow position: chr19:34420861-34420644 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 158
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 79, 31

Conread position: 43-265
Cow position: chr2:84200721-84200930 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 162
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 51, 24

Conread position: 43-275
Cow position: chr2:78356116-78355892 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 166
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 86, 11

Conread position: 43-293
Cow position: chr2:79141169-79141427 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 181
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 63, 37

Conread position: 48-275
Cow position: chr2:78971829-78972061 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 165
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 67, 32

Conread position: 50-296
Cow position: chr2:29540740-29540982 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 176
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 37, 32

Conread position: 120-398
Cow position: chr2:62121089-62120806 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 188
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 143, 54

Conread position: 27-300
Cow position: chr20:7861291-7861021 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 191
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 31, 54

Conread position: 63-271
Cow position: chr20:12779697-12779910 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 148
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 50, 17

Conread position: 59-296
Cow position: chr21:15919147-15919382 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 172
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 5, 22

Conread position: 64-275
Cow position: chr21:36275831-36275617 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 146
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 66, 16

Conread position: 43-289
Cow position: chr22:8712416-8712170 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 179
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 82, 21

Conread position: 80-300
Cow position: chr22:25510548-25510769 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 154
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 50, 67

Conread position: 43-289
Cow position: chr23:18829193-18828953 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 169
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 162, 37

Conread position: 43-340
Cow position: chr23:17394209-17394510 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 203
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 47, 37

Conread position: 53-249
Cow position: chr23:11270107-11270310 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 141
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 27, 146

Conread position: 65-275
Cow position: chr23:14371926-14371712 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 157
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 43, 15

Conread position: 36-285
Cow position: chr24:41013359-41013110 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 179
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 28, 39

Conread position: 64-286
Cow position: chr24:36103854-36103640 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 162
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 116, 16

Conread position: 43-272
Cow position: chr26:5966195-5965968 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 164
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 101, 36

Conread position: 47-282
Cow position: chr26:18730809-18731048 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 175
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 61, 15

Conread position: 53-296
Cow position: chr26:6140134-6139904 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 166
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 28, 0

Conread position: 43-295
Cow position: chr27:25661131-25661398 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 181
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 37, 128

Conread position: 43-290
Cow position: chr28:22119284-22119533 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 175
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 66, 21

Conread position: 44-290
Cow position: chr28:29427191-29426945 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 168
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 92, 36

Conread position: 19-322
Cow position: chr29:30434354-30434650 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 198
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 59, 66

Conread position: 39-275
Cow position: chr29:17931107-17930876 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 165
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 111, 41

Conread position: 47-292
Cow position: chr3:11616567-11616327 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 169
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 88, 33

Conread position: 51-290
Cow position: chr3:59453090-59453330 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 171
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 57, 28

Conread position: 51-346
Cow position: chr3:62608492-62608197 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 201
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 104, 13

Conread position: 38-265
Cow position: chr4:51276071-51276305 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 162
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 70, 41

Conread position: 45-271
Cow position: chr4:56227243-56227018 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 154
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 183, 35

Conread position: 47-271
Cow position: chr4:55092434-55092659 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 160
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 83, 27

Conread position: 71-353
Cow position: chr4:26929445-26929729 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 205
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 59, 9

Conread position: 80-273
Cow position: chr4:1783103-1783292 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 137
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 6, 100

Conread position: 33-280
Cow position: chr5:15637768-15637510 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 184
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 73, 47

Conread position: 64-296
Cow position: chr5:15542343-15542114 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 168
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 62, 17

Conread position: 81-273
Cow position: chr5:40825478-40825677 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 142
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 27, 45

Conread position: 36-242
Cow position: chr6:55897436-55897643 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 146
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 93, 44

Conread position: 53-290
Cow position: chr6:59096302-59096528 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 167
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 55, 28

Conread position: 35-275
Cow position: chr7:42925507-42925750 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 166
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 73, 46

Conread position: 39-272
Cow position: chr7:6054028-6053788 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 176
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 69, 41

Conread position: 38-271
Cow position: chr8:38333682-38333451 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 171
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 80, 59

Conread position: 39-275
Cow position: chr9:19655833-19656070 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 168
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 89, 41

Conread position: 54-275
Cow position: chr9:31155977-31155751 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 158
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 54, 26

Conread position: 65-289
Cow position: chr9:7809667-7809439 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 155
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 43, 16

Conread position: 84-265
Cow position: chr9:12027259-12027077 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 136
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 63, 72

Conread position: 31-228
Cow position: chrX:10930578-10930771 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 144
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 99, 49

Conread position: 42-290
Cow position: chrX:42521316-42521565 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 170
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 85, 74

Conread position: 47-290
Cow position: chrX:37731705-37731465 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 175
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 61, 20

Conread position: 83-290
Cow position: chrX:23886044-23886248 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 150
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 20, 70