Cow genome map

Conread name: rsag032_k21.y1

Conread position: 1-168
Cow position: chr1:94659468-94659634 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 120
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 56, 37

Conread position: 1-218
Cow position: chr1:3934562-3934348 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 152
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 56, 37

Conread position: 1-241
Cow position: chr1:73071426-73071178 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 178
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 56, 37

Conread position: 1-279
Cow position: chr1:52172880-52172589 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 204
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 56, 37

Conread position: 1-332
Cow position: chr1:68607957-68607613 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 41

Conread position: 1-359
Cow position: chr1:55276888-55276521 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-359
Cow position: chr1:85881342-85881707 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-360
Cow position: chr1:58335427-58335802 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 37

Conread position: 1-360
Cow position: chr1:85781189-85780812 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-361
Cow position: chr1:5501569-5501942 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 37

Conread position: 1-361
Cow position: chr1:28872668-28873044 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-361
Cow position: chr1:69922872-69922498 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 24

Conread position: 1-361
Cow position: chr1:76753058-76752686 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-361
Cow position: chr1:100597791-100597415 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chr1:3386415-3386037 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 41

Conread position: 1-364
Cow position: chr1:13253840-13253468 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chr1:18244784-18244410 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 37

Conread position: 1-364
Cow position: chr1:25180440-25180061 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chr1:25549654-25550033 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chr1:33550514-33550888 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chr1:42736048-42736426 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chr1:49974597-49974221 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chr1:56194340-56193962 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chr1:57367541-57367163 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chr1:57567541-57567920 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 26

Conread position: 1-364
Cow position: chr1:63606192-63605812 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 37

Conread position: 1-364
Cow position: chr1:72980873-72981237 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chr1:76545948-76545573 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chr1:76623354-76622988 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chr1:79457376-79456998 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 25

Conread position: 1-364
Cow position: chr1:86699629-86699248 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chr1:88130352-88130728 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chr1:93854112-93854490 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 19

Conread position: 4-364
Cow position: chr1:55775752-55776123 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 23

Conread position: 4-364
Cow position: chr1:62245056-62244678 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 34

Conread position: 4-364
Cow position: chr1:62806207-62805836 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 34

Conread position: 4-364
Cow position: chr1:72187277-72186903 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 34

Conread position: 5-188
Cow position: chr1:72080073-72080265 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 141
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 52, 33

Conread position: 5-234
Cow position: chr1:13449786-13450024 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 168
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 52, 33

Conread position: 5-252
Cow position: chr1:58223896-58224147 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 177
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 55, 33

Conread position: 5-329
Cow position: chr1:56162926-56163258 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 233
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 62, 33

Conread position: 5-358
Cow position: chr1:82652239-82652600 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 33

Conread position: 5-359
Cow position: chr1:40685090-40684726 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 252
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 52, 33

Conread position: 5-361
Cow position: chr1:79637336-79636963 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 260
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 56, 34

Conread position: 5-364
Cow position: chr1:17942217-17941841 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 33

Conread position: 5-364
Cow position: chr1:31366483-31366107 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 33

Conread position: 5-364
Cow position: chr1:40513892-40513531 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 20

Conread position: 5-364
Cow position: chr1:57656154-57656518 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 33

Conread position: 5-364
Cow position: chr1:97227108-97226736 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 33

Conread position: 6-361
Cow position: chr1:102435432-102435060 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 32

Conread position: 6-363
Cow position: chr1:76703770-76703410 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 251
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 52, 32

Conread position: 6-364
Cow position: chr1:79336205-79335835 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 17

Conread position: 13-308
Cow position: chr1:20988372-20988671 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 205
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 44, 25

Conread position: 13-343
Cow position: chr1:8824665-8825006 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 25

Conread position: 15-240
Cow position: chr1:8027537-8027303 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 168
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 42, 23

Conread position: 15-308
Cow position: chr1:53198397-53198704 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 219
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 42, 23

Conread position: 15-359
Cow position: chr1:80359560-80359205 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 23

Conread position: 15-364
Cow position: chr1:85791301-85791657 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 23

Conread position: 15-364
Cow position: chr1:86548517-86548164 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 23

Conread position: 16-241
Cow position: chr1:37420365-37420134 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 178
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 41, 22

Conread position: 16-299
Cow position: chr1:42176773-42176498 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 196
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 150, 22

Conread position: 16-330
Cow position: chr1:102555698-102556018 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 220
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 41, 22

Conread position: 16-356
Cow position: chr1:69287950-69287602 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 231
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 23, 29

Conread position: 16-361
Cow position: chr1:55323913-55323555 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 22

Conread position: 18-311
Cow position: chr1:67902818-67902508 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 219
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 14, 21

Conread position: 18-359
Cow position: chr1:62925219-62925578 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 25

Conread position: 18-364
Cow position: chr1:33711669-33712033 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 24

Conread position: 18-364
Cow position: chr1:82919041-82918692 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 22

Conread position: 18-364
Cow position: chr1:87244407-87244763 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 22

Conread position: 20-364
Cow position: chr1:89740618-89740275 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 18

Conread position: 22-332
Cow position: chr1:67286122-67286424 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 230
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 35, 16

Conread position: 23-332
Cow position: chr1:30027916-30027608 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 10

Conread position: 23-364
Cow position: chr1:101858369-101858014 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 200

Conread position: 25-210
Cow position: chr1:30283981-30283794 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 135
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 42, 13

Conread position: 25-212
Cow position: chr1:97560333-97560528 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 140
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 42, 13

Conread position: 25-249
Cow position: chr1:99995478-99995245 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 165
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 35, 13

Conread position: 25-328
Cow position: chr1:87449568-87449884 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 13

Conread position: 25-358
Cow position: chr1:8553943-8554292 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 245
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 35, 13

Conread position: 25-358
Cow position: chr1:11292489-11292140 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 13

Conread position: 25-358
Cow position: chr1:18880770-18880429 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 244
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 32, 14

Conread position: 25-359
Cow position: chr1:31396038-31396378 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 14

Conread position: 25-359
Cow position: chr1:39543386-39543736 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 13

Conread position: 25-359
Cow position: chr1:40052974-40053320 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 13

Conread position: 25-359
Cow position: chr1:56489462-56489805 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 13

Conread position: 25-359
Cow position: chr1:61308626-61308967 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 13

Conread position: 25-359
Cow position: chr1:71562952-71562613 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 13

Conread position: 25-359
Cow position: chr1:82564120-82564468 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 13

Conread position: 25-359
Cow position: chr1:89425205-89425552 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 13

Conread position: 25-364
Cow position: chr1:43019743-43020093 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 13

Conread position: 25-364
Cow position: chr1:59210519-59210169 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 249
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 32, 13

Conread position: 27-364
Cow position: chr1:45097339-45097672 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 73

Conread position: 29-364
Cow position: chr1:101149461-101149802 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 218

Conread position: 30-359
Cow position: chr1:17013119-17012771 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 30-359
Cow position: chr1:67835514-67835174 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 282

Conread position: 30-364
Cow position: chr1:40953328-40953672 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 259
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 11, 182

Conread position: 30-364
Cow position: chr1:42290021-42290363 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 94

Conread position: 30-364
Cow position: chr1:62854206-62853874 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 26

Conread position: 30-364
Cow position: chr1:89810009-89809652 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 250

Conread position: 31-359
Cow position: chr1:91898628-91898963 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 7

Conread position: 31-364
Cow position: chr1:52233476-52233142 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 9

Conread position: 31-364
Cow position: chr1:72656604-72656951 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 9

Conread position: 35-364
Cow position: chr1:89900077-89899732 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 172

Conread position: 35-364
Cow position: chr1:97123457-97123802 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 172

Conread position: 38-271
Cow position: chr1:88759193-88759441 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 182
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 22, 0

Conread position: 38-359
Cow position: chr1:69766099-69766427 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 170

Conread position: 38-364
Cow position: chr1:22000330-21999986 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 38-364
Cow position: chr1:89771049-89770713 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 20

Conread position: 40-360
Cow position: chr1:69536532-69536868 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 214

Conread position: 40-364
Cow position: chr1:28801797-28801450 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 0

Conread position: 44-363
Cow position: chr1:25887498-25887189 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 228
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 17, 46

Conread position: 45-331
Cow position: chr1:98661657-98661362 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 203
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 12, 238

Conread position: 47-364
Cow position: chr1:38387983-38387679 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 221
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 287, 10

Conread position: 47-364
Cow position: chr1:38414448-38414770 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 37

Conread position: 50-280
Cow position: chr1:28722431-28722675 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 187
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 7, 0

Conread position: 50-364
Cow position: chr1:88635017-88635341 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 0

Conread position: 57-364
Cow position: chr1:1461681-1461358 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 299

Conread position: 61-363
Cow position: chr1:54366161-54365855 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 212
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 21, 150

Conread position: 77-364
Cow position: chr1:20828564-20828859 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 207
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 89, 58

Conread position: 88-364
Cow position: chr1:56144652-56144368 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 205
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 40, 238

Conread position: 90-364
Cow position: chr1:40307751-40308034 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 130-330
Cow position: chr1:89478774-89478969 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 153
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 18, 36

Conread position: 141-364
Cow position: chr1:102548971-102549200 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 168
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 17, 58

Conread position: 143-331
Cow position: chr1:87969091-87969281 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 134
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 24, 0

Conread position: 143-364
Cow position: chr1:87207670-87207447 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 172
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 14, 104

Conread position: 175-364
Cow position: chr1:56722929-56723125 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 146
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 68, 139

Conread position: 176-364
Cow position: chr1:72136418-72136609 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 141
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 64, 0

Conread position: 178-361
Cow position: chr1:28276418-28276604 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 133
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 152, 0

Conread position: 198-364
Cow position: chr1:78289678-78289851 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 130
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 53, 0

Conread position: 230-364
Cow position: chr1:37419916-37419782 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 111
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 18, 53

Conread position: 230-364
Cow position: chr1:79884997-79884860 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 106
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 104, 0

Conread position: 1-235
Cow position: chr10:19715429-19715188 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 178
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 56, 37

Conread position: 1-315
Cow position: chr10:22100858-22101183 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 236
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 56, 19

Conread position: 1-361
Cow position: chr10:123933-124300 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 41

Conread position: 1-364
Cow position: chr10:1375152-1375528 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 37

Conread position: 1-364
Cow position: chr10:7283064-7282692 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 26

Conread position: 1-364
Cow position: chr10:8289584-8289976 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 275
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 56, 326

Conread position: 1-364
Cow position: chr10:19143723-19143345 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chr10:21486531-21486908 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chr10:29846996-29846616 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 38

Conread position: 1-364
Cow position: chr10:32650356-32650726 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chr10:37060545-37060917 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chr10:37769441-37769816 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 26

Conread position: 1-364
Cow position: chr10:38345748-38345369 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chr10:38538875-38538504 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chr10:57990348-57989970 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 19

Conread position: 1-364
Cow position: chr10:62409237-62408862 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 2-263
Cow position: chr10:4499333-4499592 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 184
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 156, 36

Conread position: 2-364
Cow position: chr10:39041688-39041312 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 14

Conread position: 2-365
Cow position: chr10:60489287-60489654 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 36

Conread position: 3-364
Cow position: chr10:19511223-19511599 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 20

Conread position: 5-358
Cow position: chr10:41157075-41157435 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 33

Conread position: 5-364
Cow position: chr10:4192594-4192224 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 33

Conread position: 5-364
Cow position: chr10:14859603-14859969 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 33

Conread position: 6-363
Cow position: chr10:3543948-3543585 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 241
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 51, 27

Conread position: 10-364
Cow position: chr10:11686037-11685674 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 29

Conread position: 11-364
Cow position: chr10:29633221-29632869 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 16

Conread position: 13-308
Cow position: chr10:34318630-34318334 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 208
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 44, 24

Conread position: 13-362
Cow position: chr10:38847004-38847358 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 25

Conread position: 13-362
Cow position: chr10:41352126-41351762 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 244
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 44, 26

Conread position: 13-364
Cow position: chr10:62216234-62216600 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 27

Conread position: 14-364
Cow position: chr10:41876551-41876912 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 261
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 43, 24

Conread position: 15-359
Cow position: chr10:39179422-39179772 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 23

Conread position: 15-364
Cow position: chr10:14803464-14803828 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 23

Conread position: 15-364
Cow position: chr10:39817716-39817357 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 23

Conread position: 18-364
Cow position: chr10:276225-276587 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 22

Conread position: 18-364
Cow position: chr10:29695879-29696230 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 22

Conread position: 20-329
Cow position: chr10:54967500-54967189 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 202
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 68, 18

Conread position: 25-359
Cow position: chr10:280981-280631 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 13

Conread position: 25-360
Cow position: chr10:25565600-25565256 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 13

Conread position: 25-364
Cow position: chr10:21401028-21400678 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 13

Conread position: 25-364
Cow position: chr10:38546579-38546231 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 31

Conread position: 25-364
Cow position: chr10:51952963-51952612 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 13

Conread position: 25-364
Cow position: chr10:57559908-57559555 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 249
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 32, 13

Conread position: 29-364
Cow position: chr10:54059704-54059361 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 30-364
Cow position: chr10:25359045-25359392 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 64

Conread position: 30-364
Cow position: chr10:34685537-34685887 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 0

Conread position: 30-364
Cow position: chr10:62777983-62778339 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 0

Conread position: 31-359
Cow position: chr10:55092753-55093099 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 246
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 8, 13

Conread position: 31-362
Cow position: chr10:25498000-25498343 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 9

Conread position: 38-364
Cow position: chr10:32577952-32578296 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 0

Conread position: 41-364
Cow position: chr10:10478476-10478155 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 84

Conread position: 57-363
Cow position: chr10:61297005-61297319 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 230
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 81, 19

Conread position: 60-364
Cow position: chr10:42628349-42628654 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 220
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 91, 62

Conread position: 148-286
Cow position: chr10:50018286-50018147 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 109
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 93, 0

Conread position: 180-363
Cow position: chr10:13366050-13365858 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 143
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 68, 0

Conread position: 1-189
Cow position: chr11:81853336-81853138 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 144
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 56, 37

Conread position: 1-278
Cow position: chr11:53432516-53432230 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 171
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 56, 41

Conread position: 1-356
Cow position: chr11:11987372-11987744 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chr11:10846698-10847076 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chr11:12359166-12358790 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chr11:19103233-19102855 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chr11:23876557-23876936 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chr11:24392579-24392957 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chr11:26125675-26125301 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chr11:28055341-28054964 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chr11:29669372-29668997 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 26

Conread position: 1-364
Cow position: chr11:37093809-37093430 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chr11:41171434-41171061 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 37

Conread position: 1-364
Cow position: chr11:43515380-43514999 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chr11:44157987-44157604 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 1-364
Cow position: chr11:71328899-71329275 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chr11:72110706-72110329 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 2-363
Cow position: chr11:11126180-11126545 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 244
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 32, 68

Conread position: 2-364
Cow position: chr11:7687169-7687550 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 23

Conread position: 4-364
Cow position: chr11:38836161-38835785 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 34

Conread position: 5-320
Cow position: chr11:52462353-52462692 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 241
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 52, 33

Conread position: 5-352
Cow position: chr11:4028294-4027931 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 251
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 52, 0

Conread position: 5-359
Cow position: chr11:63660327-63659955 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 253
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 52, 33

Conread position: 5-364
Cow position: chr11:4041803-4041440 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 33

Conread position: 5-364
Cow position: chr11:28230485-28230117 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 33

Conread position: 7-364
Cow position: chr11:44496322-44495966 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 31

Conread position: 9-241
Cow position: chr11:45110398-45110635 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 165
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 48, 29

Conread position: 9-360
Cow position: chr11:77729265-77728900 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 0

Conread position: 9-364
Cow position: chr11:8262432-8262068 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 30

Conread position: 10-364
Cow position: chr11:3492285-3492642 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 15

Conread position: 12-364
Cow position: chr11:19064985-19064618 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 5

Conread position: 15-359
Cow position: chr11:67449762-67450124 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 23

Conread position: 15-364
Cow position: chr11:52418660-52419019 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 23

Conread position: 16-239
Cow position: chr11:44507441-44507669 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 168
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 41, 22

Conread position: 16-263
Cow position: chr11:66725779-66726024 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 190
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 41, 12

Conread position: 16-286
Cow position: chr11:9220746-9220466 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 208
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 41, 22

Conread position: 16-364
Cow position: chr11:28062958-28063322 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 23

Conread position: 17-361
Cow position: chr11:29234372-29234020 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 22

Conread position: 17-364
Cow position: chr11:9158145-9157794 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 21

Conread position: 20-361
Cow position: chr11:43731698-43732039 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 234
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 38, 18

Conread position: 20-362
Cow position: chr11:13581703-13581348 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 241
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 7, 18

Conread position: 21-326
Cow position: chr11:49076388-49076086 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 215
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 137, 17

Conread position: 21-364
Cow position: chr11:8887877-8887521 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 19

Conread position: 25-295
Cow position: chr11:33195335-33195059 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 202
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 32, 13

Conread position: 25-359
Cow position: chr11:15982923-15983250 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 243
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 32, 13

Conread position: 25-359
Cow position: chr11:36744900-36744554 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 13

Conread position: 25-359
Cow position: chr11:57628770-57628420 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 13

Conread position: 25-361
Cow position: chr11:54208901-54209247 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 238

Conread position: 25-364
Cow position: chr11:1496783-1496441 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 13

Conread position: 25-364
Cow position: chr11:9736668-9736321 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 241
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 32, 13

Conread position: 25-364
Cow position: chr11:32450145-32450499 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 13

Conread position: 29-325
Cow position: chr11:10210677-10210381 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 9

Conread position: 30-358
Cow position: chr11:30304548-30304867 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 131

Conread position: 30-359
Cow position: chr11:67847288-67846942 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 188

Conread position: 30-364
Cow position: chr11:9660115-9659768 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 223

Conread position: 30-364
Cow position: chr11:21466364-21466708 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 30-364
Cow position: chr11:25526856-25527204 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 251
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 11, 209

Conread position: 30-364
Cow position: chr11:31414952-31414605 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 8

Conread position: 31-237
Cow position: chr11:24677341-24677555 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 158
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 109, 7

Conread position: 31-364
Cow position: chr11:37492361-37492017 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 9

Conread position: 33-364
Cow position: chr11:15998177-15998526 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 253
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 25, 7

Conread position: 34-304
Cow position: chr11:31925486-31925769 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 201
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 24, 0

Conread position: 35-361
Cow position: chr11:33044829-33044492 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 222
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 121, 0

Conread position: 35-364
Cow position: chr11:34020195-34020533 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 215

Conread position: 38-358
Cow position: chr11:28050472-28050163 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 209
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 32, 70

Conread position: 38-363
Cow position: chr11:30125945-30125616 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 79

Conread position: 38-364
Cow position: chr11:76375178-76374848 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 52

Conread position: 39-311
Cow position: chr11:12093051-12093329 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 217

Conread position: 45-240
Cow position: chr11:32682991-32683187 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 133
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 113, 76

Conread position: 50-331
Cow position: chr11:7073162-7072877 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 208
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 7, 50

Conread position: 50-364
Cow position: chr11:44861226-44860893 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 0

Conread position: 60-311
Cow position: chr11:17220893-17220632 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 190
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 98, 0

Conread position: 70-357
Cow position: chr11:10218231-10217937 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 197
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 69, 145

Conread position: 75-364
Cow position: chr11:77235107-77235397 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 210
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 168, 73

Conread position: 85-364
Cow position: chr11:53288118-53287823 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 200
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 55, 0

Conread position: 98-364
Cow position: chr11:17280883-17280613 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 206
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 54, 92

Conread position: 100-359
Cow position: chr11:17108334-17108059 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 203
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 39, 228

Conread position: 110-364
Cow position: chr11:12351701-12351438 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 205
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 25, 168

Conread position: 146-363
Cow position: chr11:75919829-75920045 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 136
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 107, 15

Conread position: 154-364
Cow position: chr11:4271449-4271238 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 162
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 87, 18

Conread position: 177-364
Cow position: chr11:7113039-7113227 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 149
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 64, 97

Conread position: 187-364
Cow position: chr11:9607127-9606943 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 132
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 65, 0

Conread position: 231-361
Cow position: chr11:45110855-45110992 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 107
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 12, 0

Conread position: 1-360
Cow position: chr12:11097781-11098156 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chr12:1402033-1402409 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chr12:8678579-8678204 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chr12:22206201-22205828 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 26

Conread position: 1-364
Cow position: chr12:25101524-25101143 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 2-307
Cow position: chr12:2840044-2839737 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 217
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 128, 25

Conread position: 4-360
Cow position: chr12:6407099-6406733 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 33

Conread position: 4-364
Cow position: chr12:27933399-27933027 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 23

Conread position: 4-364
Cow position: chr12:42860272-42859900 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 34

Conread position: 5-358
Cow position: chr12:21255105-21254743 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 256
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 62, 33

Conread position: 5-359
Cow position: chr12:32653091-32653458 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 33

Conread position: 5-364
Cow position: chr12:21197376-21197745 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 33

Conread position: 6-364
Cow position: chr12:15951707-15951346 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 14

Conread position: 13-329
Cow position: chr12:21207249-21207575 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 230
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 54, 25

Conread position: 16-361
Cow position: chr12:2282102-2282462 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 249
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 44, 22

Conread position: 18-364
Cow position: chr12:22332176-22332538 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 250
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 39, 22

Conread position: 20-308
Cow position: chr12:21941338-21941635 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 210
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 37, 18

Conread position: 25-356
Cow position: chr12:43031809-43031473 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 237
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 32, 13

Conread position: 25-359
Cow position: chr12:21426267-21426607 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 13

Conread position: 25-364
Cow position: chr12:3360477-3360822 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 246
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 32, 13

Conread position: 30-364
Cow position: chr12:21901520-21901858 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 139

Conread position: 31-364
Cow position: chr12:8310754-8311104 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 9

Conread position: 38-364
Cow position: chr12:20998545-20998203 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 40-364
Cow position: chr12:2376-2717 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 0

Conread position: 45-364
Cow position: chr12:22026341-22026670 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 221
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 16, 214

Conread position: 47-362
Cow position: chr12:45261224-45261531 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 230
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 10, 56

Conread position: 48-364
Cow position: chr12:14663023-14662693 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 228

Conread position: 50-364
Cow position: chr12:48404638-48404962 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 0

Conread position: 231-364
Cow position: chr12:26947198-26947061 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 107
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 98, 0

Conread position: 1-329
Cow position: chr13:15542784-15543125 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 210
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 56, 41

Conread position: 1-359
Cow position: chr13:4940405-4940779 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chr13:1593836-1593456 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chr13:3654987-3654613 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chr13:15521195-15520816 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 41

Conread position: 1-364
Cow position: chr13:15925064-15924687 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 37

Conread position: 1-364
Cow position: chr13:30302391-30302763 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chr13:31613016-31612638 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 37

Conread position: 1-364
Cow position: chr13:32738489-32738123 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chr13:33337003-33336630 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 26

Conread position: 1-364
Cow position: chr13:35756554-35756938 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 26

Conread position: 2-241
Cow position: chr13:33279022-33278795 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 164
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 55, 37

Conread position: 3-364
Cow position: chr13:54283917-54284278 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 17

Conread position: 5-357
Cow position: chr13:31734749-31734390 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 33

Conread position: 5-357
Cow position: chr13:34326336-34325987 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 34

Conread position: 5-359
Cow position: chr13:32986721-32986357 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 33

Conread position: 5-364
Cow position: chr13:6668801-6668426 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 33

Conread position: 6-358
Cow position: chr13:30237503-30237865 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 14

Conread position: 6-358
Cow position: chr13:35029847-35030199 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 210
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 51, 32

Conread position: 6-364
Cow position: chr13:32544271-32544638 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 19

Conread position: 13-360
Cow position: chr13:15080838-15080510 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 231
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 44, 27

Conread position: 15-364
Cow position: chr13:2297463-2297101 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 23

Conread position: 15-364
Cow position: chr13:21840863-21840497 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 23

Conread position: 15-364
Cow position: chr13:30245401-30245036 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 23

Conread position: 15-364
Cow position: chr13:50108800-50109159 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 23

Conread position: 18-364
Cow position: chr13:2232009-2232357 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 22

Conread position: 18-364
Cow position: chr13:30657625-30657271 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 22

Conread position: 18-364
Cow position: chr13:62328243-62327886 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 22

Conread position: 23-364
Cow position: chr13:34936480-34936842 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 16

Conread position: 25-324
Cow position: chr13:2389453-2389150 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 212
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 32, 13

Conread position: 25-359
Cow position: chr13:4872422-4872769 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 13

Conread position: 30-340
Cow position: chr13:13046469-13046151 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 24

Conread position: 30-364
Cow position: chr13:20543013-20542670 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 8

Conread position: 30-364
Cow position: chr13:34143314-34142960 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 0

Conread position: 30-364
Cow position: chr13:34692516-34692860 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 55

Conread position: 31-364
Cow position: chr13:2909095-2908753 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 9

Conread position: 31-364
Cow position: chr13:33825388-33825032 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 9

Conread position: 38-364
Cow position: chr13:17307840-17308172 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 18

Conread position: 38-364
Cow position: chr13:34912009-34911675 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 231

Conread position: 40-364
Cow position: chr13:3276516-3276855 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 0

Conread position: 40-364
Cow position: chr13:33928189-33927865 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 31

Conread position: 42-364
Cow position: chr13:4481835-4482168 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 285

Conread position: 45-362
Cow position: chr13:34187325-34186992 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 22

Conread position: 47-364
Cow position: chr13:31831973-31832297 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 69

Conread position: 61-359
Cow position: chr13:3058614-3058300 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 0

Conread position: 149-332
Cow position: chr13:47859929-47860111 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 134
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 66, 0

Conread position: 159-295
Cow position: chr13:32606688-32606548 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 105
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 92, 0

Conread position: 178-359
Cow position: chr13:13324262-13324443 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 134
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 153, 68

Conread position: 209-364
Cow position: chr13:56730743-56730586 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 125
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 44, 0

Conread position: 1-364
Cow position: chr14:5528262-5528635 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chr14:7471571-7471948 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 263
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chr14:16274102-16273722 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chr14:17684598-17684969 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 26

Conread position: 1-364
Cow position: chr14:19329071-19328695 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chr14:20781654-20782030 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 37

Conread position: 1-364
Cow position: chr14:22032487-22032112 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chr14:28994661-28994281 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 37

Conread position: 1-364
Cow position: chr14:37223097-37223476 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chr14:40338909-40339280 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chr14:44376634-44377009 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chr14:48255117-48254738 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 266
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 56, 37

Conread position: 2-362
Cow position: chr14:35928373-35928747 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 36

Conread position: 4-332
Cow position: chr14:23529794-23529471 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 225
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 53, 34

Conread position: 4-361
Cow position: chr14:11154955-11154584 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 34

Conread position: 5-364
Cow position: chr14:13272462-13272832 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 33

Conread position: 5-364
Cow position: chr14:44685246-44685622 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 37

Conread position: 6-357
Cow position: chr14:40170479-40170119 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 252
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 55, 32

Conread position: 6-359
Cow position: chr14:45160065-45160433 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 14

Conread position: 6-364
Cow position: chr14:41755075-41755435 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 255
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 51, 32

Conread position: 9-241
Cow position: chr14:15277654-15277407 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 178
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 12, 21

Conread position: 13-330
Cow position: chr14:14422800-14422489 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 230
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 48, 25

Conread position: 13-358
Cow position: chr14:47921228-47921574 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 238
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 44, 25

Conread position: 13-365
Cow position: chr14:38533087-38532720 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 257
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 54, 7

Conread position: 15-233
Cow position: chr14:2283197-2283424 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 163
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 52, 23

Conread position: 15-358
Cow position: chr14:23256566-23256927 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 247
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 42, 23

Conread position: 16-242
Cow position: chr14:44551265-44551500 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 184
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 41, 22

Conread position: 16-364
Cow position: chr14:44225628-44225981 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 11

Conread position: 17-315
Cow position: chr14:45079748-45080056 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 224
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 44, 12

Conread position: 17-361
Cow position: chr14:31607708-31607355 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 22

Conread position: 20-364
Cow position: chr14:46083848-46084198 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 18

Conread position: 21-364
Cow position: chr14:13302244-13302604 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 258

Conread position: 25-215
Cow position: chr14:17241460-17241653 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 140
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 35, 13

Conread position: 25-359
Cow position: chr14:9044784-9045134 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 13

Conread position: 25-364
Cow position: chr14:45672824-45672471 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 13

Conread position: 29-269
Cow position: chr14:44580169-44580412 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 170
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 29, 55

Conread position: 29-364
Cow position: chr14:13660767-13660415 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 251
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 41, 11

Conread position: 30-236
Cow position: chr14:1499975-1500193 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 160
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 7, 60

Conread position: 30-364
Cow position: chr14:44130149-44130492 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 78

Conread position: 30-364
Cow position: chr14:45767227-45767580 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 0

Conread position: 30-364
Cow position: chr14:47623796-47624143 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 10

Conread position: 31-277
Cow position: chr14:41085582-41085328 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 9

Conread position: 31-364
Cow position: chr14:29048669-29048328 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 7

Conread position: 35-363
Cow position: chr14:36967487-36967827 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 5

Conread position: 37-359
Cow position: chr14:749806-750138 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 37-360
Cow position: chr14:48703837-48704168 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 220
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 20, 158

Conread position: 38-332
Cow position: chr14:44780674-44780378 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 201
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 19, 58

Conread position: 38-352
Cow position: chr14:44783014-44782697 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 213
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 19, 58

Conread position: 38-364
Cow position: chr14:17492220-17491883 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 40-308
Cow position: chr14:34774835-34775109 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 187
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 108, 17

Conread position: 40-361
Cow position: chr14:45833391-45833731 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 240
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 17, 268

Conread position: 40-362
Cow position: chr14:35387897-35387560 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 0

Conread position: 41-364
Cow position: chr14:30597141-30596807 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 234
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 16, 178

Conread position: 41-364
Cow position: chr14:45712745-45712403 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 41-364
Cow position: chr14:45850462-45850799 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 47-364
Cow position: chr14:44856185-44855853 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 0

Conread position: 59-364
Cow position: chr14:7831281-7830966 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 47

Conread position: 60-308
Cow position: chr14:45916655-45916913 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 191
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 48, 58

Conread position: 61-286
Cow position: chr14:13778119-13778357 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 170
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 66, 0

Conread position: 61-364
Cow position: chr14:16920427-16920115 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 217
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 66, 228

Conread position: 95-329
Cow position: chr14:33394476-33394240 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 177
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 21, 47

Conread position: 100-364
Cow position: chr14:44421852-44422129 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 209
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 59, 132

Conread position: 167-364
Cow position: chr14:42151694-42151896 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 159
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 81, 0

Conread position: 236-364
Cow position: chr14:48824060-48824187 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 100
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 47, 6

Conread position: 237-364
Cow position: chr14:1500476-1500605 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 103
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 94, 5

Conread position: 1-170
Cow position: chr15:8673350-8673181 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 122
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 56, 37

Conread position: 1-332
Cow position: chr15:7259824-7260168 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 236
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 55, 37

Conread position: 1-347
Cow position: chr15:4764411-4764769 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 41

Conread position: 1-360
Cow position: chr15:15347924-15347549 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chr15:2075856-2076222 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chr15:4384471-4384850 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chr15:6156762-6156379 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 270
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 134, 37

Conread position: 1-364
Cow position: chr15:6554656-6554279 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chr15:7544078-7544455 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 24

Conread position: 1-364
Cow position: chr15:7836438-7836819 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 36

Conread position: 1-364
Cow position: chr15:12421967-12421591 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chr15:17040052-17039678 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 36

Conread position: 1-364
Cow position: chr15:18575921-18576295 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 26

Conread position: 1-364
Cow position: chr15:19738851-19738478 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 26

Conread position: 1-364
Cow position: chr15:24294292-24294666 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 26

Conread position: 1-364
Cow position: chr15:35754624-35754252 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 37

Conread position: 2-160
Cow position: chr15:52635364-52635521 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 122
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 55, 37

Conread position: 2-332
Cow position: chr15:51215791-51216134 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 36

Conread position: 2-334
Cow position: chr15:12614267-12614609 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 235
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 55, 36

Conread position: 2-364
Cow position: chr15:7233518-7233887 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 14

Conread position: 2-364
Cow position: chr15:18333624-18333252 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 14

Conread position: 2-364
Cow position: chr15:21816543-21816171 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 36

Conread position: 4-286
Cow position: chr15:317130-316835 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 201
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 53, 24

Conread position: 4-364
Cow position: chr15:31358103-31358478 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 34

Conread position: 4-364
Cow position: chr15:32495186-32494811 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 34

Conread position: 5-225
Cow position: chr15:6456490-6456719 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 158
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 56, 33

Conread position: 5-261
Cow position: chr15:14583398-14583129 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 193
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 52, 33

Conread position: 5-308
Cow position: chr15:32722970-32722668 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 219
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 56, 34

Conread position: 5-319
Cow position: chr15:49676244-49676553 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 16

Conread position: 5-358
Cow position: chr15:32709748-32710114 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 247
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 35, 0

Conread position: 5-359
Cow position: chr15:443815-444179 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 33

Conread position: 5-364
Cow position: chr15:55409-55776 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 33

Conread position: 5-364
Cow position: chr15:690019-690367 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 255
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 52, 33

Conread position: 5-364
Cow position: chr15:1781463-1781829 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 33

Conread position: 5-364
Cow position: chr15:7933181-7933544 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 24

Conread position: 5-364
Cow position: chr15:8098686-8099063 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 33

Conread position: 5-364
Cow position: chr15:28490932-28490566 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 33

Conread position: 5-364
Cow position: chr15:44828015-44828390 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 33

Conread position: 5-364
Cow position: chr15:53338263-53338614 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 33

Conread position: 5-365
Cow position: chr15:2011291-2011658 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 33

Conread position: 6-332
Cow position: chr15:685366-685712 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 238
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 56, 34

Conread position: 6-361
Cow position: chr15:37391709-37392073 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 32

Conread position: 6-364
Cow position: chr15:3262202-3261833 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 32

Conread position: 6-364
Cow position: chr15:36641834-36642200 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 14

Conread position: 6-364
Cow position: chr15:44068993-44069368 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 17

Conread position: 9-358
Cow position: chr15:327618-327977 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 29

Conread position: 10-329
Cow position: chr15:21448285-21448598 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 28

Conread position: 13-330
Cow position: chr15:51799955-51800277 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 222
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 37, 25

Conread position: 13-361
Cow position: chr15:2006753-2007112 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 239
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 148, 25

Conread position: 15-364
Cow position: chr15:22920345-22920700 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 23

Conread position: 16-332
Cow position: chr15:10479479-10479163 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 233
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 34, 9

Conread position: 16-364
Cow position: chr15:1763301-1763667 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 256
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 42, 22

Conread position: 17-275
Cow position: chr15:1236616-1236889 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 194
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 40, 21

Conread position: 17-283
Cow position: chr15:6387081-6386802 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 201
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 41, 21

Conread position: 17-332
Cow position: chr15:45886024-45886342 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 21

Conread position: 17-364
Cow position: chr15:370458-370080 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 256
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 40, 21

Conread position: 17-364
Cow position: chr15:6594611-6594251 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 21

Conread position: 18-364
Cow position: chr15:6371625-6371272 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 22

Conread position: 18-364
Cow position: chr15:17272165-17271802 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 22

Conread position: 18-364
Cow position: chr15:32692772-32693124 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 100

Conread position: 20-356
Cow position: chr15:7927848-7928192 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 238
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 119, 18

Conread position: 21-364
Cow position: chr15:3038308-3037935 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 252
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 43, 20

Conread position: 21-364
Cow position: chr15:17787928-17787582 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 229
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 36, 17

Conread position: 23-364
Cow position: chr15:4649060-4649412 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 15

Conread position: 24-364
Cow position: chr15:38979137-38979494 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 240
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 33, 14

Conread position: 25-308
Cow position: chr15:7186816-7186522 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 212
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 42, 14

Conread position: 25-357
Cow position: chr15:20748633-20748984 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 13

Conread position: 25-359
Cow position: chr15:1771722-1772069 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 13

Conread position: 25-359
Cow position: chr15:11598891-11598544 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 246
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 35, 13

Conread position: 25-359
Cow position: chr15:13428269-13428609 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 13

Conread position: 25-359
Cow position: chr15:18268754-18268417 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 13

Conread position: 25-364
Cow position: chr15:1519925-1519574 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 247
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 32, 13

Conread position: 25-364
Cow position: chr15:2648435-2648081 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 13

Conread position: 25-364
Cow position: chr15:22204893-22204538 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 14

Conread position: 25-364
Cow position: chr15:42321195-42320841 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 13

Conread position: 25-364
Cow position: chr15:50124714-50124364 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 244
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 114, 13

Conread position: 26-292
Cow position: chr15:14374171-14373891 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 188
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 30, 179

Conread position: 27-364
Cow position: chr15:32680322-32679974 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 31

Conread position: 29-286
Cow position: chr15:17291677-17291950 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 204
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 11, 0

Conread position: 29-330
Cow position: chr15:3843594-3843285 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 224
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 28, 9

Conread position: 29-364
Cow position: chr15:8001024-8000669 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 246

Conread position: 29-364
Cow position: chr15:36970146-36970499 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 0

Conread position: 29-365
Cow position: chr15:6077960-6078308 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 248
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 12, 43

Conread position: 30-280
Cow position: chr15:6650824-6650570 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 187
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 11, 200

Conread position: 30-329
Cow position: chr15:17080957-17080651 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 30-364
Cow position: chr15:41365408-41365755 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 10

Conread position: 31-364
Cow position: chr15:35747520-35747877 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 9

Conread position: 33-364
Cow position: chr15:6278030-6277678 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 0

Conread position: 34-331
Cow position: chr15:20080277-20079966 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 202
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 23, 0

Conread position: 34-364
Cow position: chr15:36648141-36648487 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 0

Conread position: 36-364
Cow position: chr15:10787860-10787519 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 38-359
Cow position: chr15:2593565-2593242 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 38-360
Cow position: chr15:35734697-35735026 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 304

Conread position: 38-364
Cow position: chr15:35648974-35648642 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 233
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 19, 33

Conread position: 39-359
Cow position: chr15:21878120-21877787 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 17

Conread position: 39-364
Cow position: chr15:6472662-6472335 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 17

Conread position: 40-362
Cow position: chr15:21960747-21961080 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 284

Conread position: 40-363
Cow position: chr15:4794916-4795257 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 240
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 17, 171

Conread position: 42-329
Cow position: chr15:8407808-8408100 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 199
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 15, 57

Conread position: 50-235
Cow position: chr15:25789946-25789751 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 142
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 7, 0

Conread position: 50-364
Cow position: chr15:4733125-4733436 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 33

Conread position: 56-360
Cow position: chr15:4670675-4670990 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 147

Conread position: 59-364
Cow position: chr15:4921402-4921719 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 0

Conread position: 60-364
Cow position: chr15:23157574-23157254 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 43

Conread position: 60-365
Cow position: chr15:7894944-7894626 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 0

Conread position: 62-357
Cow position: chr15:32286536-32286834 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 195
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 178, 63

Conread position: 80-356
Cow position: chr15:16506892-16507174 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 187
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 59, 166

Conread position: 85-364
Cow position: chr15:4195750-4196038 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 207
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 73, 0

Conread position: 113-361
Cow position: chr15:5070925-5070684 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 177
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 219, 7

Conread position: 151-363
Cow position: chr15:324301-324520 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 158
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 15, 78

Conread position: 159-365
Cow position: chr15:4170328-4170119 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 165
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 82, 0

Conread position: 1-211
Cow position: chr16:14666938-14666719 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 158
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 56, 37

Conread position: 1-249
Cow position: chr16:15369291-15369540 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 183
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 51, 37

Conread position: 1-353
Cow position: chr16:2728463-2728097 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 41

Conread position: 1-360
Cow position: chr16:24881837-24881467 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 37

Conread position: 1-364
Cow position: chr16:408182-407807 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 41

Conread position: 1-364
Cow position: chr16:1568597-1568227 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chr16:2484287-2483911 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chr16:7676845-7676470 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 37

Conread position: 1-364
Cow position: chr16:8817255-8816877 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 41

Conread position: 1-364
Cow position: chr16:15183657-15184031 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 15

Conread position: 1-364
Cow position: chr16:18688268-18687893 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chr16:25157361-25156992 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 34

Conread position: 1-364
Cow position: chr16:25440464-25440845 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chr16:28472246-28471867 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 42

Conread position: 1-364
Cow position: chr16:40297325-40296947 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chr16:43898418-43898040 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 2-292
Cow position: chr16:29982125-29982422 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 209
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 55, 36

Conread position: 2-330
Cow position: chr16:36232741-36232413 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 37

Conread position: 2-361
Cow position: chr16:2239875-2239509 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 250
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 148, 14

Conread position: 2-364
Cow position: chr16:10204564-10204189 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 40

Conread position: 2-364
Cow position: chr16:16687722-16688098 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 37

Conread position: 2-364
Cow position: chr16:29045883-29046249 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 14

Conread position: 2-364
Cow position: chr16:42051487-42051146 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 258
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 55, 18

Conread position: 5-364
Cow position: chr16:31593052-31592677 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 33

Conread position: 6-340
Cow position: chr16:44964905-44965258 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 247
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 39, 32

Conread position: 6-356
Cow position: chr16:5660722-5661081 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 33

Conread position: 6-364
Cow position: chr16:1430083-1430453 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 10

Conread position: 7-333
Cow position: chr16:54647190-54647521 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 32

Conread position: 10-337
Cow position: chr16:32935013-32935334 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 29

Conread position: 11-364
Cow position: chr16:6549664-6549295 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 188

Conread position: 13-364
Cow position: chr16:5888364-5888710 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 252
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 44, 25

Conread position: 13-364
Cow position: chr16:25152641-25153003 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 263
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 58, 27

Conread position: 13-364
Cow position: chr16:29676443-29676077 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 27

Conread position: 15-249
Cow position: chr16:21185145-21185388 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 175
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 42, 23

Conread position: 15-301
Cow position: chr16:10376399-10376111 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 208
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 42, 23

Conread position: 15-359
Cow position: chr16:28171495-28171137 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 23

Conread position: 16-364
Cow position: chr16:25084490-25084849 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 22

Conread position: 17-364
Cow position: chr16:15565614-15565977 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 309

Conread position: 17-364
Cow position: chr16:25340837-25341196 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 21

Conread position: 17-364
Cow position: chr16:40887402-40887030 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 263
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 40, 21

Conread position: 18-361
Cow position: chr16:47562561-47562911 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 241
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 24, 85

Conread position: 20-360
Cow position: chr16:55111976-55111623 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 232
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 16, 80

Conread position: 20-364
Cow position: chr16:12539056-12538696 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 18

Conread position: 21-311
Cow position: chr16:27004249-27004540 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 203
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 45, 17

Conread position: 23-362
Cow position: chr16:49236237-49235888 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 15

Conread position: 25-359
Cow position: chr16:32605701-32606051 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 13

Conread position: 25-364
Cow position: chr16:4303596-4303243 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 243
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 32, 13

Conread position: 25-364
Cow position: chr16:6942496-6942851 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 13

Conread position: 29-364
Cow position: chr16:20255429-20255082 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 11

Conread position: 29-364
Cow position: chr16:26662630-26662976 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 29

Conread position: 30-364
Cow position: chr16:36282274-36282628 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 254
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 27, 66

Conread position: 31-332
Cow position: chr16:19713968-19713655 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 9

Conread position: 31-364
Cow position: chr16:7905523-7905872 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 9

Conread position: 31-364
Cow position: chr16:11052053-11052391 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 9

Conread position: 40-295
Cow position: chr16:16029653-16029916 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 177
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 18, 0

Conread position: 41-315
Cow position: chr16:10437146-10437431 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 41-364
Cow position: chr16:42740527-42740191 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 0

Conread position: 43-359
Cow position: chr16:31650-31971 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 122

Conread position: 44-353
Cow position: chr16:9777023-9777343 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 305

Conread position: 55-364
Cow position: chr16:27734901-27734576 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 0

Conread position: 56-206
Cow position: chr16:39818529-39818690 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 121
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 82, 0

Conread position: 60-364
Cow position: chr16:23982220-23982540 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 0

Conread position: 127-364
Cow position: chr16:10808157-10808384 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 175
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 179, 35

Conread position: 159-364
Cow position: chr16:11111917-11111711 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 141
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 89, 35

Conread position: 169-364
Cow position: chr16:25187669-25187870 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 149
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 82, 5

Conread position: 170-364
Cow position: chr16:16276477-16276278 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 150
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 71, 170

Conread position: 172-337
Cow position: chr16:36362318-36362152 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 132
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 87, 164

Conread position: 184-364
Cow position: chr16:56551170-56551354 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 142
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 64, 152

Conread position: 198-364
Cow position: chr16:39820694-39820863 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 130
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 136, 0

Conread position: 199-364
Cow position: chr16:56320894-56321066 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 125
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 47, 0

Conread position: 1-364
Cow position: chr17:2578991-2579363 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 26

Conread position: 1-364
Cow position: chr17:3643409-3643031 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 37

Conread position: 1-364
Cow position: chr17:15322257-15322618 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chr17:18104254-18103875 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chr17:40803819-40804202 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 2-340
Cow position: chr17:4294824-4295146 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 237
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 55, 36

Conread position: 2-364
Cow position: chr17:4081078-4081451 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 36

Conread position: 4-364
Cow position: chr17:13929103-13929473 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 34

Conread position: 5-329
Cow position: chr17:15157522-15157194 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 33

Conread position: 5-354
Cow position: chr17:249359-249710 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 32

Conread position: 5-364
Cow position: chr17:25737094-25737468 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 33

Conread position: 6-359
Cow position: chr17:20666296-20665926 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 33

Conread position: 6-364
Cow position: chr17:11088290-11087919 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 0

Conread position: 9-364
Cow position: chr17:4059541-4059908 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 29

Conread position: 15-357
Cow position: chr17:8208550-8208905 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 23

Conread position: 15-357
Cow position: chr17:15143920-15143571 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 244
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 42, 23

Conread position: 15-359
Cow position: chr17:228855-228502 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 243
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 34, 23

Conread position: 15-359
Cow position: chr17:2249141-2248781 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 23

Conread position: 15-364
Cow position: chr17:2261557-2261914 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 23

Conread position: 15-364
Cow position: chr17:14217584-14217219 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 23

Conread position: 18-247
Cow position: chr17:22131384-22131623 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 172
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 39, 22

Conread position: 18-333
Cow position: chr17:1284313-1283992 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 22

Conread position: 21-359
Cow position: chr17:15435241-15435591 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 17

Conread position: 21-362
Cow position: chr17:14326051-14325693 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 17

Conread position: 21-364
Cow position: chr17:27345249-27345610 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 188

Conread position: 25-359
Cow position: chr17:1383361-1383014 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 13

Conread position: 25-359
Cow position: chr17:11782821-11783171 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 13

Conread position: 25-359
Cow position: chr17:22160366-22160716 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 13

Conread position: 25-359
Cow position: chr17:24780498-24780848 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 13

Conread position: 25-364
Cow position: chr17:9653999-9653651 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 13

Conread position: 28-364
Cow position: chr17:28109549-28109889 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 10

Conread position: 29-361
Cow position: chr17:15370536-15370879 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 11

Conread position: 30-363
Cow position: chr17:2286829-2287191 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 258
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 11, 357

Conread position: 30-364
Cow position: chr17:16889583-16889928 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 75

Conread position: 31-358
Cow position: chr17:14308849-14308503 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 230
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 27, 7

Conread position: 38-247
Cow position: chr17:6259166-6259383 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 159
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 23, 181

Conread position: 40-332
Cow position: chr17:44853459-44853164 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 219
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 17, 44

Conread position: 40-334
Cow position: chr17:20401140-20401455 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 219
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 17, 44

Conread position: 40-364
Cow position: chr17:22430013-22429677 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 54

Conread position: 45-364
Cow position: chr17:35591695-35592020 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 41

Conread position: 47-279
Cow position: chr17:32024724-32024479 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 189
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 10, 0

Conread position: 95-364
Cow position: chr17:2173402-2173685 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 202
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 65, 0

Conread position: 103-361
Cow position: chr17:2737907-2738180 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 106-364
Cow position: chr17:1879623-1879897 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 197
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 23, 158

Conread position: 128-364
Cow position: chr17:23857468-23857231 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 13

Conread position: 131-329
Cow position: chr17:42264090-42264286 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 143
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 27, 115

Conread position: 141-359
Cow position: chr17:43988114-43988335 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 157
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 102, 5

Conread position: 159-364
Cow position: chr17:20183633-20183424 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 163
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 21, 0

Conread position: 177-363
Cow position: chr17:18185913-18185720 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 145
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 66, 0

Conread position: 177-364
Cow position: chr17:1946587-1946783 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 141
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 68, 0

Conread position: 236-364
Cow position: chr17:20088055-20087926 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 102
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 98, 6

Conread position: 236-364
Cow position: chr17:22131909-22132036 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 99
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 7, 0

Conread position: 1-249
Cow position: chr18:14129929-14130185 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 185
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 56, 37

Conread position: 1-315
Cow position: chr18:32293407-32293736 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 19

Conread position: 1-361
Cow position: chr18:16176972-16176603 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chr18:23797285-23797660 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chr18:28974263-28973890 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 28

Conread position: 1-364
Cow position: chr18:36507967-36508346 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chr18:37504700-37505076 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chr18:51480474-51480851 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 2-359
Cow position: chr18:11275453-11275098 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 36

Conread position: 4-359
Cow position: chr18:44621395-44621767 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 9

Conread position: 5-363
Cow position: chr18:54172205-54171833 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 33

Conread position: 5-364
Cow position: chr18:16660359-16659992 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 34

Conread position: 5-364
Cow position: chr18:19352016-19352398 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 263
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 52, 33

Conread position: 5-364
Cow position: chr18:41841187-41840813 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 33

Conread position: 5-364
Cow position: chr18:54024717-54024346 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 257
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 52, 33

Conread position: 9-364
Cow position: chr18:25349682-25350052 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 29

Conread position: 12-328
Cow position: chr18:27838655-27838329 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 8

Conread position: 12-364
Cow position: chr18:14415624-14415989 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 26

Conread position: 13-244
Cow position: chr18:35287900-35288136 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 170
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 40, 25

Conread position: 15-359
Cow position: chr18:16078353-16078707 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 23

Conread position: 15-364
Cow position: chr18:51660072-51660430 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 23

Conread position: 15-364
Cow position: chr18:55089277-55088912 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 253
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 42, 23

Conread position: 16-363
Cow position: chr18:45958352-45958695 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 247
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 41, 22

Conread position: 16-364
Cow position: chr18:33335523-33335881 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 23

Conread position: 18-364
Cow position: chr18:23944720-23944360 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 22

Conread position: 18-364
Cow position: chr18:35335139-35335502 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 22

Conread position: 21-364
Cow position: chr18:33358516-33358880 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 22-307
Cow position: chr18:29899982-29900271 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 203
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 35, 16

Conread position: 25-359
Cow position: chr18:33953909-33953560 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 250
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 32, 13

Conread position: 25-364
Cow position: chr18:47741676-47742031 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 13

Conread position: 30-364
Cow position: chr18:51257647-51257990 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 26

Conread position: 30-364
Cow position: chr18:51310251-51310593 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 10

Conread position: 31-364
Cow position: chr18:2020013-2019673 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 17

Conread position: 31-364
Cow position: chr18:48221543-48221890 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 9

Conread position: 33-364
Cow position: chr18:39748249-39748589 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 51

Conread position: 40-290
Cow position: chr18:47719897-47719633 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 198
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 17, 0

Conread position: 40-364
Cow position: chr18:43147253-43146913 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 0

Conread position: 44-364
Cow position: chr18:1520804-1521144 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 48-360
Cow position: chr18:40345613-40345315 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 219
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 191, 38

Conread position: 49-364
Cow position: chr18:40478066-40478400 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 0

Conread position: 50-364
Cow position: chr18:33268526-33268855 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 48

Conread position: 57-364
Cow position: chr18:17992871-17992550 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 179

Conread position: 58-360
Cow position: chr18:27986720-27987036 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 254

Conread position: 60-364
Cow position: chr18:32651689-32652008 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 232
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 67, 217

Conread position: 136-364
Cow position: chr18:16533765-16533992 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 178
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 197, 11

Conread position: 148-364
Cow position: chr18:6869465-6869244 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 167
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 93, 85

Conread position: 167-364
Cow position: chr18:53785649-53785850 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 161
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 11, 0

Conread position: 217-364
Cow position: chr18:2887164-2887008 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 122
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 11, 0

Conread position: 231-364
Cow position: chr18:54044825-54044690 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 107
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 10, 0

Conread position: 1-232
Cow position: chr19:33872882-33873117 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 172
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 56, 36

Conread position: 1-364
Cow position: chr19:171849-172228 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 37

Conread position: 1-364
Cow position: chr19:203601-203978 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 37

Conread position: 1-364
Cow position: chr19:4385126-4385498 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 37

Conread position: 1-364
Cow position: chr19:10672668-10672290 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chr19:30371916-30372299 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 16

Conread position: 1-364
Cow position: chr19:33941252-33941629 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 19

Conread position: 1-364
Cow position: chr19:40852792-40852413 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 2-364
Cow position: chr19:32223769-32223422 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 23

Conread position: 3-336
Cow position: chr19:261076-261422 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 254
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 54, 13

Conread position: 5-168
Cow position: chr19:544248-544086 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 118
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 52, 33

Conread position: 5-329
Cow position: chr19:37549-37875 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 34

Conread position: 5-362
Cow position: chr19:359850-359489 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 242
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 45, 33

Conread position: 5-364
Cow position: chr19:76588-76236 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 259
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 52, 15

Conread position: 6-351
Cow position: chr19:40888001-40887641 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 10

Conread position: 6-357
Cow position: chr19:28592926-28593287 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 32

Conread position: 6-359
Cow position: chr19:685498-685855 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 32

Conread position: 6-361
Cow position: chr19:30754820-30755192 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 250
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 149, 33

Conread position: 13-267
Cow position: chr19:36477011-36477271 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 180
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 45, 26

Conread position: 13-360
Cow position: chr19:35376216-35376572 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 241
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 42, 27

Conread position: 13-364
Cow position: chr19:439996-439626 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 257
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 44, 25

Conread position: 15-364
Cow position: chr19:7341724-7342085 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 23

Conread position: 16-364
Cow position: chr19:34076-34437 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 22

Conread position: 17-330
Cow position: chr19:42649411-42649096 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 223
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 40, 21

Conread position: 18-363
Cow position: chr19:31341379-31341722 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 239
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 39, 26

Conread position: 21-363
Cow position: chr19:32665192-32665546 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 36

Conread position: 23-363
Cow position: chr19:20125294-20125635 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 246
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 35, 15

Conread position: 24-364
Cow position: chr19:29209227-29209578 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 17

Conread position: 25-329
Cow position: chr19:772272-772578 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 219
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 32, 13

Conread position: 25-359
Cow position: chr19:32244342-32244696 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 248
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 32, 13

Conread position: 25-364
Cow position: chr19:32212398-32212053 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 13

Conread position: 28-364
Cow position: chr19:548061-548404 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 243
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 33, 10

Conread position: 29-331
Cow position: chr19:36036033-36036340 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 204
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 28, 8

Conread position: 29-364
Cow position: chr19:1031780-1032119 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 16

Conread position: 31-364
Cow position: chr19:4252689-4252341 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 9

Conread position: 37-359
Cow position: chr19:43143389-43143728 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 240
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 20, 289

Conread position: 37-364
Cow position: chr19:39390196-39390534 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 63

Conread position: 38-364
Cow position: chr19:52152575-52152244 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 125

Conread position: 38-364
Cow position: chr19:55078420-55078763 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 40-364
Cow position: chr19:416325-416670 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 54

Conread position: 40-364
Cow position: chr19:4533067-4532732 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 150

Conread position: 41-360
Cow position: chr19:536568-536885 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 208
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 26, 69

Conread position: 50-312
Cow position: chr19:39688236-39688505 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 124

Conread position: 60-361
Cow position: chr19:7488010-7488327 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 265

Conread position: 100-364
Cow position: chr19:39546374-39546645 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 204
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 50, 11

Conread position: 128-363
Cow position: chr19:561729-561489 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 166
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 54, 31

Conread position: 143-332
Cow position: chr19:378084-377893 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 150
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 7, 42

Conread position: 174-364
Cow position: chr19:27052943-27052752 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 150
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 67, 138

Conread position: 197-364
Cow position: chr19:28376374-28376539 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 136
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 45, 137

Conread position: 1-225
Cow position: chr2:28792139-28792369 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 166
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 56, 37

Conread position: 1-240
Cow position: chr2:36979183-36979432 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 184
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 56, 41

Conread position: 1-361
Cow position: chr2:24921427-24921802 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chr2:10187141-10186774 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 26

Conread position: 1-364
Cow position: chr2:10269576-10269201 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 41

Conread position: 1-364
Cow position: chr2:11160045-11159667 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 37

Conread position: 1-364
Cow position: chr2:13046597-13046230 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chr2:16899326-16899706 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 41

Conread position: 1-364
Cow position: chr2:19009315-19009693 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 37

Conread position: 1-364
Cow position: chr2:24145361-24145735 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 26

Conread position: 1-364
Cow position: chr2:28651143-28650767 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 15

Conread position: 1-364
Cow position: chr2:45214175-45213796 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chr2:47810105-47810470 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 41

Conread position: 1-364
Cow position: chr2:53328832-53329208 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chr2:81255889-81256277 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 272
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 56, 37

Conread position: 2-331
Cow position: chr2:42334184-42333843 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 21

Conread position: 2-363
Cow position: chr2:3729826-3730188 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 36

Conread position: 5-329
Cow position: chr2:54736715-54737045 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 33

Conread position: 5-360
Cow position: chr2:47604709-47604350 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 246
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 56, 33

Conread position: 5-364
Cow position: chr2:78741235-78741590 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 262
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 146, 33

Conread position: 6-364
Cow position: chr2:283607-283233 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 32

Conread position: 6-364
Cow position: chr2:782639-782281 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 33

Conread position: 6-364
Cow position: chr2:976186-975818 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 17

Conread position: 6-364
Cow position: chr2:1673560-1673198 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 14

Conread position: 6-364
Cow position: chr2:12225062-12224687 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 32

Conread position: 6-364
Cow position: chr2:44935978-44935625 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 14

Conread position: 6-364
Cow position: chr2:65939361-65938988 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 32

Conread position: 9-329
Cow position: chr2:32388657-32388987 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 30

Conread position: 13-183
Cow position: chr2:6879273-6879441 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 126
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 44, 25

Conread position: 13-359
Cow position: chr2:2380221-2380580 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 25

Conread position: 13-364
Cow position: chr2:2185164-2184797 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 222
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 126, 0

Conread position: 13-364
Cow position: chr2:2357359-2356999 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 27

Conread position: 13-364
Cow position: chr2:16288348-16288706 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 25

Conread position: 13-364
Cow position: chr2:44992186-44991820 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 25

Conread position: 14-280
Cow position: chr2:2363248-2363526 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 199
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 43, 26

Conread position: 14-363
Cow position: chr2:20904034-20903679 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 247
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 12, 223

Conread position: 15-329
Cow position: chr2:52615566-52615893 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 23

Conread position: 15-357
Cow position: chr2:213129-212766 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 246
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 42, 23

Conread position: 15-357
Cow position: chr2:2413695-2413344 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 23

Conread position: 15-364
Cow position: chr2:39420689-39421052 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 23

Conread position: 15-364
Cow position: chr2:59414568-59414220 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 250
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 45, 23

Conread position: 16-330
Cow position: chr2:78761584-78761898 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 22

Conread position: 16-364
Cow position: chr2:54649699-54649342 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 13

Conread position: 17-364
Cow position: chr2:36031960-36031611 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 21

Conread position: 17-364
Cow position: chr2:56438617-56438260 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 21

Conread position: 18-364
Cow position: chr2:422168-422530 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 22

Conread position: 20-364
Cow position: chr2:10733722-10733378 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 18

Conread position: 21-364
Cow position: chr2:202550-202193 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 256
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 37, 17

Conread position: 22-269
Cow position: chr2:15578550-15578294 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 190
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 125, 16

Conread position: 22-364
Cow position: chr2:14560302-14560659 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 23-364
Cow position: chr2:32654456-32654806 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 15

Conread position: 25-359
Cow position: chr2:3325462-3325110 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 248
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 35, 13

Conread position: 25-359
Cow position: chr2:26865434-26865088 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 13

Conread position: 25-359
Cow position: chr2:47039299-47038958 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 13

Conread position: 25-359
Cow position: chr2:80956536-80956182 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 250
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 32, 13

Conread position: 25-364
Cow position: chr2:5905745-5905388 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 25-364
Cow position: chr2:25031361-25031016 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 13

Conread position: 25-364
Cow position: chr2:44090411-44090759 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 13

Conread position: 26-364
Cow position: chr2:82166723-82167068 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 14

Conread position: 30-212
Cow position: chr2:44166236-44166044 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 140
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 11, 0

Conread position: 30-354
Cow position: chr2:57334311-57334650 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 30-364
Cow position: chr2:1491318-1490968 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 229

Conread position: 30-364
Cow position: chr2:41171805-41172147 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 241
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 27, 136

Conread position: 30-364
Cow position: chr2:44345826-44346175 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 10

Conread position: 30-364
Cow position: chr2:52152745-52152393 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 0

Conread position: 30-364
Cow position: chr2:85356660-85356310 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 0

Conread position: 31-357
Cow position: chr2:4235298-4235629 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 217
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 130, 13

Conread position: 31-358
Cow position: chr2:67421734-67421391 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 31-364
Cow position: chr2:2102342-2102008 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 236
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 26, 9

Conread position: 38-311
Cow position: chr2:40452637-40452927 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 197
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 19, 239

Conread position: 38-355
Cow position: chr2:27816893-27817227 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 235
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 19, 0

Conread position: 38-359
Cow position: chr2:41685630-41685968 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 239
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 19, 0

Conread position: 38-360
Cow position: chr2:75250890-75251210 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 40

Conread position: 38-364
Cow position: chr2:6877612-6877950 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 282

Conread position: 38-364
Cow position: chr2:22076911-22077253 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 298

Conread position: 38-364
Cow position: chr2:26920813-26921156 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 242
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 19, 0

Conread position: 38-364
Cow position: chr2:51305777-51305448 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 19

Conread position: 40-309
Cow position: chr2:49603851-49604132 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 197
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 20, 161

Conread position: 41-361
Cow position: chr2:53552306-53552628 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 214
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 17, 84

Conread position: 41-364
Cow position: chr2:72922709-72922372 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 47-332
Cow position: chr2:52655600-52655894 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 28

Conread position: 47-364
Cow position: chr2:5481508-5481182 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 212

Conread position: 50-364
Cow position: chr2:11969623-11969302 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 45

Conread position: 53-364
Cow position: chr2:10712276-10711970 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 25

Conread position: 56-364
Cow position: chr2:46945799-46946127 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 0

Conread position: 57-364
Cow position: chr2:10844199-10843879 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 235
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 89, 227

Conread position: 60-363
Cow position: chr2:80516213-80516509 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 222
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 102, 16

Conread position: 60-364
Cow position: chr2:50076744-50077060 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 227
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 67, 276

Conread position: 61-364
Cow position: chr2:49471388-49471706 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 22

Conread position: 62-364
Cow position: chr2:6773022-6772712 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 234
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 15, 138

Conread position: 145-325
Cow position: chr2:28621589-28621410 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 131
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 31, 0

Conread position: 149-360
Cow position: chr2:37790909-37790697 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 153
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 186, 90

Conread position: 171-332
Cow position: chr2:34565666-34565502 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 131
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 77, 6

Conread position: 184-364
Cow position: chr2:26868549-26868733 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 146
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 111, 89

Conread position: 185-364
Cow position: chr2:7901557-7901745 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 142
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 71, 44

Conread position: 202-330
Cow position: chr2:61130995-61130868 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 106
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 61, 39

Conread position: 206-364
Cow position: chr2:7211000-7211164 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 123
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 42, 0

Conread position: 214-364
Cow position: chr2:40245362-40245518 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 120
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 25, 70

Conread position: 1-190
Cow position: chr20:15291643-15291841 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 143
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 56, 37

Conread position: 1-227
Cow position: chr20:29947781-29948016 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 171
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 56, 37

Conread position: 1-247
Cow position: chr20:8004917-8004662 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 181
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 126, 37

Conread position: 1-364
Cow position: chr20:10102945-10102575 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 38

Conread position: 1-364
Cow position: chr20:13762505-13762876 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 26

Conread position: 1-364
Cow position: chr20:23470065-23469685 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chr20:23798478-23798856 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chr20:27868793-27869171 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chr20:30683934-30684309 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 2-351
Cow position: chr20:22206132-22206504 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 254
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 55, 19

Conread position: 5-359
Cow position: chr20:19437564-19437927 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 33

Conread position: 5-364
Cow position: chr20:7116871-7116495 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 33

Conread position: 6-364
Cow position: chr20:5534541-5534913 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 17

Conread position: 6-364
Cow position: chr20:18315978-18315610 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 14

Conread position: 6-364
Cow position: chr20:21393173-21393537 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 32

Conread position: 6-364
Cow position: chr20:25851392-25851016 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 17

Conread position: 13-364
Cow position: chr20:12439155-12438787 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 46

Conread position: 15-242
Cow position: chr20:822367-822596 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 163
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 42, 23

Conread position: 16-303
Cow position: chr20:11276665-11276386 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 219
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 34, 22

Conread position: 16-364
Cow position: chr20:15064368-15064743 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 18-364
Cow position: chr20:3252527-3252161 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 252
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 40, 22

Conread position: 20-364
Cow position: chr20:24614165-24614511 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 20

Conread position: 23-304
Cow position: chr20:3032550-3032840 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 194

Conread position: 29-364
Cow position: chr20:15098246-15097904 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 214

Conread position: 30-364
Cow position: chr20:4800019-4799677 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 10

Conread position: 30-364
Cow position: chr20:8313809-8313462 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 49

Conread position: 38-364
Cow position: chr20:28160412-28160754 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 287

Conread position: 39-331
Cow position: chr20:24516503-24516804 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 203
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 22, 148

Conread position: 40-364
Cow position: chr20:5483827-5484164 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 60

Conread position: 42-361
Cow position: chr20:10846440-10846107 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 240
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 15, 56

Conread position: 46-364
Cow position: chr20:3270362-3270678 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 231
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 11, 97

Conread position: 49-364
Cow position: chr20:28565957-28565622 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 234
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 75, 0

Conread position: 49-364
Cow position: chr20:28593393-28593720 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 236
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 9, 46

Conread position: 60-364
Cow position: chr20:9954301-9954011 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 221
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 20, 84

Conread position: 1-364
Cow position: chr21:145634-146012 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chr21:1190756-1191141 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chr21:10566393-10566766 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 272

Conread position: 1-364
Cow position: chr21:10849794-10850173 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chr21:30600199-30599827 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 37

Conread position: 1-364
Cow position: chr21:33251106-33251485 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chr21:48115822-48116202 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 37

Conread position: 2-363
Cow position: chr21:23860498-23860875 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 36

Conread position: 2-364
Cow position: chr21:2884018-2883655 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 14

Conread position: 4-358
Cow position: chr21:2501654-2502015 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 34

Conread position: 4-359
Cow position: chr21:39424787-39425151 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 34

Conread position: 5-279
Cow position: chr21:5016312-5016023 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 194
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 62, 33

Conread position: 5-364
Cow position: chr21:1292456-1292086 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 33

Conread position: 5-364
Cow position: chr21:2415963-2416328 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 24

Conread position: 5-364
Cow position: chr21:7267814-7267450 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 33

Conread position: 6-360
Cow position: chr21:3778486-3778855 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 17

Conread position: 13-359
Cow position: chr21:2510383-2510739 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 25

Conread position: 13-362
Cow position: chr21:20745013-20744668 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 249
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 40, 26

Conread position: 13-364
Cow position: chr21:4590231-4589899 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 248
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 148, 25

Conread position: 14-364
Cow position: chr21:34292749-34293110 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 26

Conread position: 15-359
Cow position: chr21:26638728-26638377 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 23

Conread position: 16-364
Cow position: chr21:2769722-2769368 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 24

Conread position: 16-364
Cow position: chr21:4183272-4183617 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 21

Conread position: 18-332
Cow position: chr21:4076578-4076903 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 22

Conread position: 18-361
Cow position: chr21:47939210-47939576 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 257
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 39, 22

Conread position: 18-364
Cow position: chr21:34259479-34259128 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 22

Conread position: 21-157
Cow position: chr21:35089437-35089573 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 108
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 36, 16

Conread position: 25-356
Cow position: chr21:28529804-28529459 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 13

Conread position: 25-358
Cow position: chr21:4090388-4090736 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 247
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 35, 13

Conread position: 25-359
Cow position: chr21:11453915-11453568 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 238
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 35, 13

Conread position: 25-359
Cow position: chr21:12056259-12055912 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 13

Conread position: 25-359
Cow position: chr21:27708500-27708850 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 14

Conread position: 25-359
Cow position: chr21:37044660-37045001 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 241
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 35, 13

Conread position: 25-359
Cow position: chr21:46915330-46915675 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 13

Conread position: 30-363
Cow position: chr21:13124256-13123907 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 67

Conread position: 30-364
Cow position: chr21:3615039-3615385 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 10

Conread position: 30-364
Cow position: chr21:4222955-4222594 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 88

Conread position: 31-364
Cow position: chr21:2716925-2716590 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 9

Conread position: 31-364
Cow position: chr21:23811657-23811969 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 244
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 26, 8

Conread position: 37-359
Cow position: chr21:11505336-11505675 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 209

Conread position: 38-359
Cow position: chr21:26819263-26818933 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 206

Conread position: 38-360
Cow position: chr21:47947868-47948198 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 10

Conread position: 40-364
Cow position: chr21:35596133-35596461 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 125

Conread position: 43-295
Cow position: chr21:21031496-21031757 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 187
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 77, 111

Conread position: 45-308
Cow position: chr21:6699804-6699522 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 189
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 12, 233

Conread position: 45-364
Cow position: chr21:9891370-9891687 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 236
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 12, 82

Conread position: 49-357
Cow position: chr21:2674876-2674543 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 235
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 8, 293

Conread position: 49-363
Cow position: chr21:2530364-2530035 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 261

Conread position: 60-364
Cow position: chr21:2789208-2788898 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 133

Conread position: 60-364
Cow position: chr21:3426259-3426578 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 23

Conread position: 62-364
Cow position: chr21:30561577-30561895 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 0

Conread position: 75-332
Cow position: chr21:36714428-36714691 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 187
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 61, 46

Conread position: 129-364
Cow position: chr21:2541561-2541320 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 176
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 112, 9

Conread position: 143-364
Cow position: chr21:33755165-33755397 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 169
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 56, 45

Conread position: 148-364
Cow position: chr21:27623-27836 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 162
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 22, 94

Conread position: 163-364
Cow position: chr21:4456715-4456920 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 150
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 78, 34

Conread position: 1-360
Cow position: chr22:19144156-19143783 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-360
Cow position: chr22:44395324-44395697 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chr22:561157-560785 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chr22:3307169-3306812 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 37

Conread position: 1-364
Cow position: chr22:17329195-17328819 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 37

Conread position: 1-364
Cow position: chr22:34167873-34168252 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chr22:39469975-39469599 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 37

Conread position: 1-364
Cow position: chr22:42990717-42991092 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 26

Conread position: 1-364
Cow position: chr22:44933521-44933900 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 2-336
Cow position: chr22:1046929-1047266 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 226
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 55, 18

Conread position: 2-362
Cow position: chr22:33350710-33351087 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 247
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 124, 37

Conread position: 2-364
Cow position: chr22:31312888-31313261 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 18

Conread position: 5-168
Cow position: chr22:36180691-36180852 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 118
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 52, 33

Conread position: 5-329
Cow position: chr22:44370068-44369738 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 33

Conread position: 5-332
Cow position: chr22:44456857-44457201 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 246
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 52, 33

Conread position: 5-332
Cow position: chr22:46585766-46585426 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 234
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 52, 33

Conread position: 5-356
Cow position: chr22:327603-327244 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 33

Conread position: 5-358
Cow position: chr22:18476215-18475852 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 33

Conread position: 5-364
Cow position: chr22:15850891-15851255 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 33

Conread position: 5-364
Cow position: chr22:44353402-44353036 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 33

Conread position: 6-241
Cow position: chr22:526361-526119 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 174
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 55, 10

Conread position: 6-364
Cow position: chr22:118271-117895 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 6-364
Cow position: chr22:8136658-8136278 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 14

Conread position: 6-364
Cow position: chr22:21588878-21589247 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 17

Conread position: 9-340
Cow position: chr22:13772345-13772675 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 240
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 48, 29

Conread position: 15-358
Cow position: chr22:27310221-27309859 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 252
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 42, 23

Conread position: 15-358
Cow position: chr22:37265007-37265368 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 249
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 45, 23

Conread position: 15-364
Cow position: chr22:693195-693552 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 23

Conread position: 15-364
Cow position: chr22:44489442-44489807 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 253
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 40, 23

Conread position: 16-242
Cow position: chr22:47640130-47640348 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 162
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 32, 23

Conread position: 16-280
Cow position: chr22:41420128-41419855 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 200
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 41, 23

Conread position: 16-332
Cow position: chr22:1285376-1285046 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 0

Conread position: 16-364
Cow position: chr22:44609196-44609520 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 245
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 41, 22

Conread position: 17-363
Cow position: chr22:309281-309634 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 22

Conread position: 17-364
Cow position: chr22:1321181-1321532 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 21

Conread position: 17-364
Cow position: chr22:31335477-31335113 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 0

Conread position: 20-357
Cow position: chr22:871272-870943 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 220
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 37, 18

Conread position: 21-364
Cow position: chr22:1270943-1270590 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 258
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 103, 17

Conread position: 23-364
Cow position: chr22:6504090-6503744 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 15

Conread position: 24-352
Cow position: chr22:46636129-46635793 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 234
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 34, 14

Conread position: 25-329
Cow position: chr22:10910286-10909975 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 225
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 32, 13

Conread position: 25-364
Cow position: chr22:10546216-10546565 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 245
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 35, 13

Conread position: 25-364
Cow position: chr22:24949395-24949750 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 13

Conread position: 31-249
Cow position: chr22:42771119-42771346 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 163
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 114, 0

Conread position: 31-278
Cow position: chr22:36534393-36534132 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 197
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 26, 9

Conread position: 31-360
Cow position: chr22:5672310-5672653 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 9

Conread position: 31-364
Cow position: chr22:1318966-1319317 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 9

Conread position: 38-356
Cow position: chr22:36266962-36267282 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 221
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 114, 38

Conread position: 38-359
Cow position: chr22:35672778-35672440 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 241
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 22, 18

Conread position: 38-361
Cow position: chr22:32348387-32348063 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 233
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 19, 75

Conread position: 38-364
Cow position: chr22:37131228-37131568 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 190

Conread position: 40-364
Cow position: chr22:46852922-46853262 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 249
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 17, 63

Conread position: 45-361
Cow position: chr22:36861946-36861613 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 0

Conread position: 46-364
Cow position: chr22:39882586-39882256 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 171

Conread position: 47-364
Cow position: chr22:36736362-36736683 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 68

Conread position: 49-364
Cow position: chr22:18816793-18816461 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 237
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 8, 150

Conread position: 54-363
Cow position: chr22:158320-157983 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 239
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 84, 0

Conread position: 68-335
Cow position: chr22:32485719-32485448 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 0

Conread position: 100-359
Cow position: chr22:1878434-1878707 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 195
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 39, 0

Conread position: 125-364
Cow position: chr22:34598350-34598592 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 178
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 37, 72

Conread position: 183-364
Cow position: chr22:27283781-27283964 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 135
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 68, 154

Conread position: 223-364
Cow position: chr22:13917279-13917423 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 114
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 111, 0

Conread position: 1-241
Cow position: chr23:14975220-14974978 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 170
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 56, 37

Conread position: 1-360
Cow position: chr23:2715893-2716263 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chr23:2027581-2027198 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 26

Conread position: 1-364
Cow position: chr23:4434017-4434383 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 19

Conread position: 1-364
Cow position: chr23:4815620-4815993 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 26

Conread position: 1-364
Cow position: chr23:27399048-27399424 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 26

Conread position: 1-364
Cow position: chr23:28912955-28913332 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 36

Conread position: 1-364
Cow position: chr23:36031828-36031453 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 2-332
Cow position: chr23:11778030-11778371 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 215
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 58, 18

Conread position: 2-357
Cow position: chr23:22876085-22875721 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 36

Conread position: 4-353
Cow position: chr23:15220348-15219988 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 34

Conread position: 4-364
Cow position: chr23:3882150-3881778 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 38

Conread position: 4-364
Cow position: chr23:19489085-19489458 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 34

Conread position: 5-359
Cow position: chr23:4359383-4359745 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 33

Conread position: 5-361
Cow position: chr23:2339952-2340320 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 34

Conread position: 5-364
Cow position: chr23:2796016-2795645 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 33

Conread position: 5-364
Cow position: chr23:4509652-4510019 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 255
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 52, 33

Conread position: 5-364
Cow position: chr23:22147713-22147330 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 33

Conread position: 6-169
Cow position: chr23:15176597-15176760 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 119
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 34, 17

Conread position: 6-364
Cow position: chr23:15525159-15525530 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 17

Conread position: 9-337
Cow position: chr23:1141119-1141444 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 29

Conread position: 13-364
Cow position: chr23:4276512-4276875 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 27

Conread position: 15-359
Cow position: chr23:28216847-28217206 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 253
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 45, 23

Conread position: 15-364
Cow position: chr23:20301769-20302135 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 252
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 112, 10

Conread position: 17-364
Cow position: chr23:16617279-16616929 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 21

Conread position: 18-239
Cow position: chr23:14966413-14966184 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 168
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 118, 24

Conread position: 18-364
Cow position: chr23:5875213-5874854 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 26

Conread position: 21-332
Cow position: chr23:31595620-31595292 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 22

Conread position: 23-364
Cow position: chr23:1025486-1025141 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 254
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 34, 15

Conread position: 29-364
Cow position: chr23:967779-967425 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 251
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 28, 0

Conread position: 30-364
Cow position: chr23:2765800-2765461 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 137

Conread position: 30-364
Cow position: chr23:7273230-7273569 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 103

Conread position: 31-364
Cow position: chr23:989069-988720 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 9

Conread position: 34-364
Cow position: chr23:5779511-5779166 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 6

Conread position: 38-336
Cow position: chr23:1330708-1330399 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 38-359
Cow position: chr23:19951007-19950668 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 238
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 29, 0

Conread position: 38-364
Cow position: chr23:4641047-4640704 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 48-330
Cow position: chr23:16481762-16481470 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 210
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 116, 0

Conread position: 50-360
Cow position: chr23:2574155-2574481 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 244

Conread position: 54-364
Cow position: chr23:30636707-30636381 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 0

Conread position: 95-332
Cow position: chr23:8980853-8980607 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 0

Conread position: 103-343
Cow position: chr23:2725506-2725754 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 172
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 48, 129

Conread position: 143-359
Cow position: chr23:2313547-2313322 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 167
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 15, 0

Conread position: 217-364
Cow position: chr23:2524429-2524277 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 119
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 24, 0

Conread position: 1-225
Cow position: chr24:29186433-29186666 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 167
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 56, 37

Conread position: 1-361
Cow position: chr24:148964-148613 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 252
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chr24:6433865-6434247 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chr24:12085831-12086204 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 26

Conread position: 1-364
Cow position: chr24:19833011-19833387 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 2-332
Cow position: chr24:32330975-32331296 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 218
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 202, 36

Conread position: 2-364
Cow position: chr24:12289088-12288723 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 35

Conread position: 2-365
Cow position: chr24:15392669-15392302 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 36

Conread position: 5-199
Cow position: chr24:17314686-17314479 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 153
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 26, 15

Conread position: 5-269
Cow position: chr24:5993339-5993069 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 195
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 52, 33

Conread position: 5-270
Cow position: chr24:38635378-38635647 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 191
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 47, 33

Conread position: 5-359
Cow position: chr24:6083648-6084018 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 33

Conread position: 5-360
Cow position: chr24:12224824-12224467 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 257
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 238, 15

Conread position: 5-364
Cow position: chr24:6335329-6335701 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 33

Conread position: 5-364
Cow position: chr24:12131851-12131482 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 219
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 14, 34

Conread position: 5-364
Cow position: chr24:14384978-14384607 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 254
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 51, 33

Conread position: 5-364
Cow position: chr24:33932999-33933372 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 37

Conread position: 12-365
Cow position: chr24:12161520-12161886 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 8

Conread position: 13-312
Cow position: chr24:6057320-6057625 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 207
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 123, 20

Conread position: 13-330
Cow position: chr24:12236703-12237023 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 12

Conread position: 13-364
Cow position: chr24:7060741-7061106 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 0

Conread position: 15-359
Cow position: chr24:6645059-6645414 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 23

Conread position: 15-359
Cow position: chr24:33739701-33739343 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 248
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 42, 23

Conread position: 16-279
Cow position: chr24:37216369-37216651 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 210
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 41, 22

Conread position: 16-358
Cow position: chr24:12798108-12797764 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 22

Conread position: 16-364
Cow position: chr24:14391079-14390723 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 23

Conread position: 22-329
Cow position: chr24:23098783-23098468 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 208
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 35, 16

Conread position: 25-364
Cow position: chr24:6025445-6025089 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 252
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 35, 13

Conread position: 25-364
Cow position: chr24:22792828-22793179 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 13

Conread position: 35-320
Cow position: chr24:17187206-17187505 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 38-212
Cow position: chr24:7712628-7712451 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 130
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 19, 86

Conread position: 38-363
Cow position: chr24:1447244-1447562 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 220
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 110, 55

Conread position: 38-364
Cow position: chr24:9189067-9188725 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 38-364
Cow position: chr24:12114367-12114035 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 248

Conread position: 40-364
Cow position: chr24:35838961-35838619 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 44

Conread position: 42-359
Cow position: chr24:12485650-12485316 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 233
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 18, 14

Conread position: 47-364
Cow position: chr24:36560398-36560077 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 119

Conread position: 51-357
Cow position: chr24:36296852-36297159 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 208
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 77, 138

Conread position: 60-364
Cow position: chr24:13531848-13531530 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 227

Conread position: 143-364
Cow position: chr24:8029927-8030157 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 172
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 15, 0

Conread position: 159-359
Cow position: chr24:16084866-16084659 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 151
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 92, 0

Conread position: 197-364
Cow position: chr24:14584927-14585099 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 139
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 51, 14

Conread position: 217-364
Cow position: chr24:22951988-22952142 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 120
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 29, 0

Conread position: 219-364
Cow position: chr24:9092419-9092267 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 115
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 24, 0

Conread position: 1-218
Cow position: chr25:34014761-34014536 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 167
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 56, 37

Conread position: 1-360
Cow position: chr25:18890430-18890056 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-360
Cow position: chr25:34347407-34347033 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chr25:22147081-22147457 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 15

Conread position: 1-364
Cow position: chr25:25506234-25506613 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chr25:26278861-26279228 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 4-364
Cow position: chr25:18411694-18411326 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 34

Conread position: 4-364
Cow position: chr25:26866810-26867188 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 34

Conread position: 5-359
Cow position: chr25:26921819-26922186 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 251
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 52, 33

Conread position: 6-357
Cow position: chr25:20777305-20776942 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 251
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 51, 14

Conread position: 9-364
Cow position: chr25:8674519-8674878 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 33

Conread position: 13-310
Cow position: chr25:23346094-23345801 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 206
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 197, 25

Conread position: 13-364
Cow position: chr25:18276224-18275861 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 25

Conread position: 14-364
Cow position: chr25:17469096-17468733 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 26

Conread position: 17-364
Cow position: chr25:13780634-13780992 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 269

Conread position: 17-364
Cow position: chr25:17560994-17560649 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 246
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 40, 21

Conread position: 17-364
Cow position: chr25:17563303-17562958 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 244
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 40, 21

Conread position: 20-330
Cow position: chr25:20493965-20494276 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 213
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 129, 18

Conread position: 25-364
Cow position: chr25:19916697-19917046 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 240
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 42, 13

Conread position: 25-364
Cow position: chr25:35362811-35362460 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 13

Conread position: 30-364
Cow position: chr25:14015787-14016133 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 211

Conread position: 38-354
Cow position: chr25:33243495-33243809 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 221
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 137, 31

Conread position: 38-364
Cow position: chr25:20629197-20629540 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 39-359
Cow position: chr25:32579604-32579923 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 232
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 18, 138

Conread position: 40-363
Cow position: chr25:18028006-18027664 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 0

Conread position: 40-364
Cow position: chr25:11375724-11375385 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 0

Conread position: 43-361
Cow position: chr25:19288719-19288395 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 227
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 14, 277

Conread position: 45-362
Cow position: chr25:12759970-12759635 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 222
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 98, 196

Conread position: 49-348
Cow position: chr25:24171667-24171972 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 205
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 78, 213

Conread position: 61-261
Cow position: chr25:12943793-12943583 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 149
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 66, 0

Conread position: 61-364
Cow position: chr25:34656801-34656482 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 0

Conread position: 140-364
Cow position: chr25:36240276-36240509 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 175
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 25, 0

Conread position: 143-364
Cow position: chr25:33991322-33991097 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 166
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 19, 143

Conread position: 159-362
Cow position: chr25:18060835-18060626 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 160
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 82, 187

Conread position: 1-328
Cow position: chr26:5674775-5675114 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-361
Cow position: chr26:19351908-19351534 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 26

Conread position: 1-364
Cow position: chr26:9563753-9563374 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 37

Conread position: 13-359
Cow position: chr26:12588944-12588586 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 25

Conread position: 15-364
Cow position: chr26:8869495-8869860 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 250
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 42, 356

Conread position: 16-243
Cow position: chr26:9846515-9846278 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 168
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 42, 22

Conread position: 16-363
Cow position: chr26:20262485-20262842 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 245
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 141, 22

Conread position: 16-364
Cow position: chr26:20254698-20255052 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 12

Conread position: 18-364
Cow position: chr26:12574774-12574413 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 22

Conread position: 23-330
Cow position: chr26:3074161-3074474 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 214
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 34, 16

Conread position: 25-269
Cow position: chr26:24201251-24201505 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 183
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 32, 13

Conread position: 25-359
Cow position: chr26:9112095-9112445 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 13

Conread position: 25-364
Cow position: chr26:11254433-11254073 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 251
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 32, 13

Conread position: 32-364
Cow position: chr26:15145122-15144777 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 244
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 25, 55

Conread position: 34-332
Cow position: chr26:12665626-12665920 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 214
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 144, 15

Conread position: 38-357
Cow position: chr26:2352707-2352382 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 39

Conread position: 38-364
Cow position: chr26:6850533-6850191 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 330

Conread position: 38-364
Cow position: chr26:18854736-18855072 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 39-276
Cow position: chr26:3031167-3030917 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 181
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 18, 171

Conread position: 40-364
Cow position: chr26:4605537-4605200 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 26

Conread position: 44-364
Cow position: chr26:17397284-17396946 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 45-332
Cow position: chr26:16904436-16904725 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 213
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 82, 56

Conread position: 47-364
Cow position: chr26:3691451-3691790 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 196

Conread position: 100-364
Cow position: chr26:2198338-2198611 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 193
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 58, 0

Conread position: 105-364
Cow position: chr26:11537123-11536848 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 201
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 41, 10

Conread position: 141-364
Cow position: chr26:23605146-23604916 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 173
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 100, 0

Conread position: 178-364
Cow position: chr26:30589578-30589392 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 145
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 63, 42

Conread position: 206-332
Cow position: chr26:6602025-6602155 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 102
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 42, 0

Conread position: 1-190
Cow position: chr27:11471850-11471653 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 141
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 56, 0

Conread position: 1-352
Cow position: chr27:13897737-13898100 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 37

Conread position: 1-361
Cow position: chr27:14460914-14460539 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chr27:1208899-1209272 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 26

Conread position: 1-364
Cow position: chr27:9993649-9993285 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chr27:23334706-23335082 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chr27:26324356-26324736 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 41

Conread position: 2-332
Cow position: chr27:5906578-5906910 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 226
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 48, 36

Conread position: 4-364
Cow position: chr27:27662439-27662822 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 34

Conread position: 5-363
Cow position: chr27:26556428-26556064 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 15

Conread position: 13-329
Cow position: chr27:2364299-2364634 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 239
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 16, 0

Conread position: 15-359
Cow position: chr27:16034836-16034477 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 23

Conread position: 20-329
Cow position: chr27:25116814-25117126 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 19

Conread position: 25-364
Cow position: chr27:15540894-15541249 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 13

Conread position: 30-328
Cow position: chr27:27051232-27051546 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 0

Conread position: 33-357
Cow position: chr27:15278491-15278151 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 38-364
Cow position: chr27:25805299-25804963 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 57

Conread position: 40-364
Cow position: chr27:16438914-16439244 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 206

Conread position: 40-364
Cow position: chr27:25002952-25002610 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 5

Conread position: 51-362
Cow position: chr27:27197955-27197655 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 209
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 9, 37

Conread position: 58-361
Cow position: chr27:3996769-3996458 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 215
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 107, 81

Conread position: 1-167
Cow position: chr28:15035830-15035665 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 121
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 56, 37

Conread position: 1-188
Cow position: chr28:7739840-7740037 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 146
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 60, 37

Conread position: 1-361
Cow position: chr28:17388067-17388443 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 41

Conread position: 1-364
Cow position: chr28:781983-782360 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 281

Conread position: 1-364
Cow position: chr28:1168578-1168202 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chr28:2083190-2083567 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chr28:3193189-3192826 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chr28:5565447-5565827 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chr28:8378152-8378529 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chr28:8721859-8721484 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 38

Conread position: 1-364
Cow position: chr28:10582395-10582021 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 18

Conread position: 1-364
Cow position: chr28:10619510-10619145 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 45

Conread position: 1-364
Cow position: chr28:13459560-13459934 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chr28:14706085-14705707 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chr28:17667926-17667549 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 41

Conread position: 1-364
Cow position: chr28:18520875-18520496 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chr28:22261565-22261186 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chr28:32792793-32792415 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 2-173
Cow position: chr28:1504229-1504398 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 122
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 55, 14

Conread position: 2-332
Cow position: chr28:33251931-33252247 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 226
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 55, 36

Conread position: 2-363
Cow position: chr28:22827651-22828014 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 37

Conread position: 4-364
Cow position: chr28:34593432-34593804 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 34

Conread position: 5-364
Cow position: chr28:6780737-6780365 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 255
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 52, 33

Conread position: 5-364
Cow position: chr28:29819161-29819533 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 24

Conread position: 6-364
Cow position: chr28:21358613-21358973 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 14

Conread position: 10-364
Cow position: chr28:12149916-12150275 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 13

Conread position: 16-364
Cow position: chr28:5812314-5812672 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 22

Conread position: 17-328
Cow position: chr28:13522331-13522653 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 20

Conread position: 17-365
Cow position: chr28:5796428-5796781 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 21

Conread position: 18-364
Cow position: chr28:2591526-2591879 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 22

Conread position: 18-364
Cow position: chr28:15681496-15681852 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 22

Conread position: 20-361
Cow position: chr28:1387785-1387433 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 18

Conread position: 21-332
Cow position: chr28:21325400-21325719 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 18

Conread position: 21-364
Cow position: chr28:9953740-9954101 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 312

Conread position: 23-168
Cow position: chr28:24667222-24667366 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 113
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 35, 15

Conread position: 25-201
Cow position: chr28:489100-489285 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 133
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 32, 13

Conread position: 25-359
Cow position: chr28:15950591-15950941 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 13

Conread position: 25-364
Cow position: chr28:1952754-1953095 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 13

Conread position: 25-364
Cow position: chr28:15920849-15920501 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 243
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 35, 13

Conread position: 29-364
Cow position: chr28:7900971-7901314 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 0

Conread position: 30-276
Cow position: chr28:26007651-26007903 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 186
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 119, 9

Conread position: 35-324
Cow position: chr28:34324449-34324746 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 199
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 114, 21

Conread position: 38-329
Cow position: chr28:13441255-13440950 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 38-364
Cow position: chr28:14750170-14750513 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 40-364
Cow position: chr28:9155655-9155322 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 43

Conread position: 60-364
Cow position: chr28:1815222-1814903 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 172

Conread position: 65-359
Cow position: chr28:7821915-7822217 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 93

Conread position: 77-359
Cow position: chr28:24587098-24587393 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 215
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 17, 0

Conread position: 88-364
Cow position: chr28:7001661-7001953 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 116-333
Cow position: chr28:4381108-4380889 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 48

Conread position: 157-332
Cow position: chr28:2846742-2846569 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 134
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 16, 7

Conread position: 179-364
Cow position: chr28:2989909-2989724 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 146
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 72, 114

Conread position: 1-249
Cow position: chr29:45587746-45587489 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 190
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 62, 37

Conread position: 1-332
Cow position: chr29:23975385-23975732 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-356
Cow position: chr29:19623692-19623324 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-356
Cow position: chr29:45459276-45459638 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 27

Conread position: 1-358
Cow position: chr29:19652660-19653033 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-361
Cow position: chr29:38226547-38226929 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chr29:48924-48547 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chr29:2099398-2099775 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 43

Conread position: 1-364
Cow position: chr29:2841813-2841438 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chr29:6266940-6266563 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chr29:20250711-20251090 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chr29:21246120-21246500 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 37

Conread position: 1-364
Cow position: chr29:25932992-25932614 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chr29:39080154-39079775 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chr29:40503427-40503048 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chr29:43322111-43322490 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 37

Conread position: 2-330
Cow position: chr29:803776-803432 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 238
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 55, 23

Conread position: 2-363
Cow position: chr29:30811104-30811461 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 36

Conread position: 4-360
Cow position: chr29:10824401-10824029 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 38

Conread position: 5-321
Cow position: chr29:9644165-9643840 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 33

Conread position: 5-330
Cow position: chr29:104141-104467 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 33

Conread position: 5-359
Cow position: chr29:13577983-13578344 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 33

Conread position: 5-364
Cow position: chr29:10648689-10648321 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 37

Conread position: 5-364
Cow position: chr29:16109284-16109659 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 261
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 52, 33

Conread position: 5-364
Cow position: chr29:32539367-32539741 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 33

Conread position: 9-361
Cow position: chr29:26165259-26164895 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 29

Conread position: 12-360
Cow position: chr29:15950614-15950257 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 209

Conread position: 15-358
Cow position: chr29:35296464-35296799 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 245
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 45, 23

Conread position: 15-364
Cow position: chr29:32315608-32315971 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 253
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 42, 24

Conread position: 17-332
Cow position: chr29:2750811-2750498 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 232
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 40, 12

Conread position: 17-364
Cow position: chr29:5957171-5957533 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 21

Conread position: 18-332
Cow position: chr29:35196256-35196568 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 22

Conread position: 18-364
Cow position: chr29:10848535-10848178 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 258
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 25, 11

Conread position: 18-364
Cow position: chr29:11048851-11049213 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 22

Conread position: 25-364
Cow position: chr29:15895270-15894920 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 13

Conread position: 25-364
Cow position: chr29:27250757-27250404 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 13

Conread position: 25-364
Cow position: chr29:28061090-28060735 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 13

Conread position: 25-364
Cow position: chr29:31121384-31121736 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 249
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 37, 13

Conread position: 30-364
Cow position: chr29:12796882-12796535 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 10

Conread position: 30-364
Cow position: chr29:21543794-21543434 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 0

Conread position: 30-364
Cow position: chr29:27041182-27040833 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 0

Conread position: 35-361
Cow position: chr29:43366406-43366071 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 46

Conread position: 37-364
Cow position: chr29:611026-610682 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 240
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 30, 0

Conread position: 38-242
Cow position: chr29:14368534-14368749 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 151
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 22, 0

Conread position: 38-357
Cow position: chr29:14013060-14013395 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 226
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 19, 0

Conread position: 38-357
Cow position: chr29:14073353-14073016 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 227
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 19, 0

Conread position: 40-364
Cow position: chr29:16769726-16770059 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 280

Conread position: 45-308
Cow position: chr29:2468344-2468058 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 201
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 83, 0

Conread position: 45-364
Cow position: chr29:16022140-16022460 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 230
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 73, 115

Conread position: 46-364
Cow position: chr29:7840395-7840727 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 0

Conread position: 48-363
Cow position: chr29:1714859-1715175 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 213
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 193, 256

Conread position: 58-364
Cow position: chr29:2689515-2689832 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 0

Conread position: 102-363
Cow position: chr29:32640457-32640708 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 185
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 204, 51

Conread position: 124-364
Cow position: chr29:31180805-31181054 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 180
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 36, 0

Conread position: 140-363
Cow position: chr29:34609248-34609022 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 169
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 19, 76

Conread position: 143-360
Cow position: chr29:13853317-13853097 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 167
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 103, 61

Conread position: 144-308
Cow position: chr29:42801890-42802055 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 129
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 12, 30

Conread position: 148-364
Cow position: chr29:21427347-21427124 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 162
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 87, 0

Conread position: 154-308
Cow position: chr29:42650041-42650195 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 122
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 87, 19

Conread position: 180-363
Cow position: chr29:17662661-17662853 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 142
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 59, 0

Conread position: 1-360
Cow position: chr3:43040220-43039848 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 37

Conread position: 1-364
Cow position: chr3:2711488-2711112 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 42

Conread position: 1-364
Cow position: chr3:10239123-10239497 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 19

Conread position: 1-364
Cow position: chr3:18542940-18542559 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chr3:18810974-18811352 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chr3:21183208-21182836 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 26

Conread position: 1-364
Cow position: chr3:23291934-23291558 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 21

Conread position: 1-364
Cow position: chr3:34031427-34031050 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chr3:36882442-36882070 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chr3:38865878-38866246 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chr3:47273496-47273132 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 264
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chr3:52865275-52864901 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 37

Conread position: 1-364
Cow position: chr3:56650795-56650420 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chr3:57485252-57484879 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chr3:59860835-59861214 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chr3:64017892-64017517 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 40

Conread position: 1-364
Cow position: chr3:72629542-72629917 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 37

Conread position: 2-323
Cow position: chr3:3979868-3980189 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 34

Conread position: 2-333
Cow position: chr3:24592139-24591812 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 35

Conread position: 2-333
Cow position: chr3:36099237-36098890 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 238
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 55, 37

Conread position: 2-360
Cow position: chr3:5954696-5954342 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 255
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 55, 11

Conread position: 2-364
Cow position: chr3:48061350-48060982 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 18

Conread position: 2-364
Cow position: chr3:57500039-57499670 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 267
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 55, 35

Conread position: 4-364
Cow position: chr3:78027938-78027562 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 34

Conread position: 5-359
Cow position: chr3:41212264-41211894 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 33

Conread position: 5-359
Cow position: chr3:66891480-66891118 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 245
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 52, 33

Conread position: 5-361
Cow position: chr3:19938387-19938759 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 33

Conread position: 5-364
Cow position: chr3:42431713-42432079 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 267
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 56, 23

Conread position: 5-364
Cow position: chr3:49677236-49677607 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 33

Conread position: 5-364
Cow position: chr3:56340946-56340579 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 32

Conread position: 5-364
Cow position: chr3:64358686-64358317 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 33

Conread position: 5-364
Cow position: chr3:75041671-75041318 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 33

Conread position: 6-287
Cow position: chr3:32623528-32623243 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 207
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 51, 96

Conread position: 6-329
Cow position: chr3:34093915-34093612 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 223
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 52, 32

Conread position: 12-332
Cow position: chr3:60210684-60210364 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 219
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 45, 22

Conread position: 13-332
Cow position: chr3:45775585-45775261 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 227
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 44, 24

Conread position: 14-364
Cow position: chr3:39326174-39326536 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 24

Conread position: 15-359
Cow position: chr3:37968568-37968922 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 23

Conread position: 15-359
Cow position: chr3:46861815-46861460 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 247
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 54, 22

Conread position: 15-364
Cow position: chr3:3522498-3522863 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 23

Conread position: 15-364
Cow position: chr3:19878146-19878511 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 23

Conread position: 15-364
Cow position: chr3:46678429-46678066 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 23

Conread position: 15-364
Cow position: chr3:64028599-64028237 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 23

Conread position: 16-363
Cow position: chr3:14634593-14634264 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 22

Conread position: 16-364
Cow position: chr3:3054103-3054447 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 10

Conread position: 16-364
Cow position: chr3:63005657-63005300 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 22

Conread position: 17-357
Cow position: chr3:40340476-40340122 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 21

Conread position: 17-363
Cow position: chr3:6684938-6685308 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 262
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 41, 21

Conread position: 17-364
Cow position: chr3:69932883-69933242 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 21

Conread position: 20-330
Cow position: chr3:2909589-2909282 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 222
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 224, 18

Conread position: 21-274
Cow position: chr3:66618676-66618939 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 188
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 21, 44

Conread position: 21-364
Cow position: chr3:2633412-2633775 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 0

Conread position: 23-248
Cow position: chr3:5996377-5996142 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 171
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 17, 191

Conread position: 23-325
Cow position: chr3:19801919-19802230 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 227
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 35, 16

Conread position: 23-361
Cow position: chr3:48231482-48231149 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 15

Conread position: 23-363
Cow position: chr3:15177817-15178157 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 16

Conread position: 25-358
Cow position: chr3:45032235-45032584 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 13

Conread position: 25-359
Cow position: chr3:24313972-24314322 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 13

Conread position: 25-364
Cow position: chr3:15989534-15989187 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 13

Conread position: 25-364
Cow position: chr3:17829153-17828801 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 13

Conread position: 25-364
Cow position: chr3:32146591-32146242 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 13

Conread position: 25-364
Cow position: chr3:47082152-47081810 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 13

Conread position: 25-364
Cow position: chr3:49614479-49614129 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 13

Conread position: 25-364
Cow position: chr3:72704691-72705046 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 252
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 32, 13

Conread position: 29-328
Cow position: chr3:34396552-34396243 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 213
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 16, 190

Conread position: 29-357
Cow position: chr3:16867278-16866938 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 229
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 73, 9

Conread position: 29-364
Cow position: chr3:2653619-2653954 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 16

Conread position: 29-364
Cow position: chr3:19943576-19943909 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 131

Conread position: 29-364
Cow position: chr3:31354756-31354410 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 30-357
Cow position: chr3:49140910-49140570 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 226
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 10, 51

Conread position: 30-360
Cow position: chr3:31898473-31898129 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 75

Conread position: 30-364
Cow position: chr3:9716307-9716662 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 249

Conread position: 30-364
Cow position: chr3:42580469-42580117 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 266

Conread position: 30-364
Cow position: chr3:56320810-56321165 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 236
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 27, 0

Conread position: 30-364
Cow position: chr3:66119153-66119503 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 68

Conread position: 30-364
Cow position: chr3:77474260-77474608 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 253
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 11, 68

Conread position: 31-364
Cow position: chr3:36117163-36117524 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 243
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 8, 0

Conread position: 31-364
Cow position: chr3:70084137-70083797 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 62

Conread position: 35-364
Cow position: chr3:207657-207314 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 301

Conread position: 35-364
Cow position: chr3:5830120-5829780 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 105

Conread position: 37-364
Cow position: chr3:50128363-50128033 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 48

Conread position: 38-304
Cow position: chr3:14440221-14439943 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 177

Conread position: 38-308
Cow position: chr3:7168111-7168393 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 167
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 101, 0

Conread position: 38-331
Cow position: chr3:79433694-79433405 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 191
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 19, 75

Conread position: 38-359
Cow position: chr3:6781896-6782231 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 38-360
Cow position: chr3:40822894-40823231 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 38-364
Cow position: chr3:22335403-22335741 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 38-364
Cow position: chr3:64650139-64650480 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 5

Conread position: 47-332
Cow position: chr3:3805893-3806169 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 30

Conread position: 47-364
Cow position: chr3:472068-472380 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 100

Conread position: 49-364
Cow position: chr3:5047666-5047336 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 258

Conread position: 50-364
Cow position: chr3:19757442-19757111 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 278

Conread position: 58-332
Cow position: chr3:54865154-54864884 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 201
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 100, 32

Conread position: 61-329
Cow position: chr3:47179674-47179393 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 206
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 66, 0

Conread position: 81-363
Cow position: chr3:26949066-26949362 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 218
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 58, 42

Conread position: 99-360
Cow position: chr3:55230110-55229851 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 195
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 149, 10

Conread position: 100-331
Cow position: chr3:50914879-50915118 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 179
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 51, 0

Conread position: 141-364
Cow position: chr3:58947074-58947305 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 176
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 25, 83

Conread position: 148-311
Cow position: chr3:80871533-80871696 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 122
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 155-364
Cow position: chr3:4026908-4027120 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 154
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 93, 0

Conread position: 159-364
Cow position: chr3:18463939-18463737 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 161
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 175, 68

Conread position: 179-364
Cow position: chr3:66638396-66638588 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 151
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 72, 0

Conread position: 1-232
Cow position: chr4:57978691-57978931 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 172
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 56, 37

Conread position: 1-239
Cow position: chr4:41118401-41118650 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 178
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 56, 37

Conread position: 1-247
Cow position: chr4:33074110-33073854 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 187
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 56, 37

Conread position: 1-361
Cow position: chr4:1050347-1049970 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 0

Conread position: 1-364
Cow position: chr4:355190-355563 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 26

Conread position: 1-364
Cow position: chr4:3960870-3961245 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chr4:6491072-6490695 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chr4:13491847-13492229 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 1-364
Cow position: chr4:18516170-18516549 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 41

Conread position: 1-364
Cow position: chr4:24445925-24445546 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chr4:25600326-25599965 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 37

Conread position: 1-364
Cow position: chr4:29532440-29532061 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chr4:36895648-36896027 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 37

Conread position: 1-364
Cow position: chr4:41330714-41331094 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chr4:43320362-43319983 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chr4:43880385-43880762 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 15

Conread position: 1-364
Cow position: chr4:45050021-45049645 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 2-361
Cow position: chr4:11383706-11384060 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 254
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 47, 36

Conread position: 4-232
Cow position: chr4:3358001-3358239 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 175
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 46, 34

Conread position: 4-364
Cow position: chr4:44724360-44724736 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 34

Conread position: 4-364
Cow position: chr4:48025683-48026051 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 23

Conread position: 5-358
Cow position: chr4:16055872-16056251 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 259
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 52, 33

Conread position: 5-360
Cow position: chr4:33493089-33493461 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 22

Conread position: 6-362
Cow position: chr4:11394043-11393687 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 239
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 153, 19

Conread position: 6-364
Cow position: chr4:12241942-12241566 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 33

Conread position: 6-364
Cow position: chr4:21338699-21338339 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 14

Conread position: 12-359
Cow position: chr4:528278-528641 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 26

Conread position: 13-363
Cow position: chr4:58883378-58883030 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 244
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 12, 28

Conread position: 15-239
Cow position: chr4:41954083-41954315 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 163
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 52, 22

Conread position: 15-329
Cow position: chr4:157816-158130 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 24

Conread position: 15-359
Cow position: chr4:1931332-1930975 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 255
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 42, 23

Conread position: 15-364
Cow position: chr4:101640-101276 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 23

Conread position: 15-364
Cow position: chr4:602285-602647 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 28

Conread position: 15-364
Cow position: chr4:6269333-6268975 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 23

Conread position: 17-332
Cow position: chr4:6449597-6449273 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 228
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 40, 21

Conread position: 18-363
Cow position: chr4:47718299-47717954 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 244
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 39, 22

Conread position: 20-364
Cow position: chr4:46663494-46663850 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 18

Conread position: 21-354
Cow position: chr4:1464622-1464287 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 17

Conread position: 21-364
Cow position: chr4:34185557-34185214 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 17

Conread position: 21-364
Cow position: chr4:54190170-54190508 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 17

Conread position: 22-364
Cow position: chr4:28830336-28830692 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 16

Conread position: 25-358
Cow position: chr4:47764872-47764523 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 13

Conread position: 25-359
Cow position: chr4:3125079-3125429 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 13

Conread position: 38-364
Cow position: chr4:31668627-31668967 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 194

Conread position: 40-364
Cow position: chr4:66925319-66925658 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 55

Conread position: 42-364
Cow position: chr4:1371674-1371362 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 35

Conread position: 50-364
Cow position: chr4:16359215-16359536 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 46

Conread position: 51-364
Cow position: chr4:13547351-13547681 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 235
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 9, 0

Conread position: 61-359
Cow position: chr4:30308100-30307804 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 219
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 171, 80

Conread position: 61-360
Cow position: chr4:27442433-27442739 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 218
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 88, 17

Conread position: 69-309
Cow position: chr4:60265445-60265191 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 183
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 79, 179

Conread position: 110-364
Cow position: chr4:10408177-10408434 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 6

Conread position: 148-364
Cow position: chr4:18425087-18424867 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 161
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 93, 0

Conread position: 153-364
Cow position: chr4:66179552-66179335 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 167
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 13, 0

Conread position: 179-364
Cow position: chr4:12608040-12607851 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 147
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 69, 16

Conread position: 230-364
Cow position: chr4:11618377-11618511 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 109
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 102, 80

Conread position: 1-332
Cow position: chr5:54793249-54792905 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 37

Conread position: 1-332
Cow position: chr5:59282131-59282475 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-347
Cow position: chr5:7273235-7273587 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-360
Cow position: chr5:3504873-3504503 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-360
Cow position: chr5:37731714-37732089 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-361
Cow position: chr5:2913819-2914195 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chr5:1342427-1342046 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chr5:2430763-2430385 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chr5:3785180-3785551 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chr5:24098015-24098396 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 42

Conread position: 1-364
Cow position: chr5:49119909-49119534 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 41

Conread position: 1-364
Cow position: chr5:55627373-55627739 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chr5:64782644-64782271 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 26

Conread position: 2-304
Cow position: chr5:46631042-46630740 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 36

Conread position: 4-364
Cow position: chr5:30578697-30579070 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 34

Conread position: 4-364
Cow position: chr5:34695956-34696332 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 263
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 57, 34

Conread position: 4-364
Cow position: chr5:46739210-46738837 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 34

Conread position: 4-364
Cow position: chr5:48809340-48808968 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 12

Conread position: 5-359
Cow position: chr5:4019825-4019456 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 33

Conread position: 5-359
Cow position: chr5:27909895-27909528 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 33

Conread position: 5-364
Cow position: chr5:32771855-32772229 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 33

Conread position: 6-364
Cow position: chr5:10918171-10918545 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 37

Conread position: 6-364
Cow position: chr5:57483174-57482799 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 17

Conread position: 9-364
Cow position: chr5:32945257-32945622 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 29

Conread position: 14-364
Cow position: chr5:28030875-28031230 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 26

Conread position: 14-364
Cow position: chr5:45699663-45700031 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 26

Conread position: 15-271
Cow position: chr5:10443818-10443555 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 185
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 45, 23

Conread position: 15-299
Cow position: chr5:10776865-10776573 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 219
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 45, 23

Conread position: 15-359
Cow position: chr5:10844492-10844132 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 23

Conread position: 15-364
Cow position: chr5:58195386-58195749 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 259
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 45, 23

Conread position: 16-225
Cow position: chr5:23688087-23687868 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 158
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 42, 21

Conread position: 16-248
Cow position: chr5:41963546-41963305 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 177
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 42, 23

Conread position: 16-294
Cow position: chr5:58747276-58747559 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 210
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 41, 22

Conread position: 16-364
Cow position: chr5:49594071-49593709 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 22

Conread position: 17-308
Cow position: chr5:6519285-6519575 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 12

Conread position: 17-364
Cow position: chr5:4384616-4384974 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 258
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 44, 10

Conread position: 17-364
Cow position: chr5:23716560-23716201 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 21

Conread position: 17-364
Cow position: chr5:32674343-32673995 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 21

Conread position: 18-364
Cow position: chr5:49181672-49182023 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 22

Conread position: 20-361
Cow position: chr5:51162305-51162659 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 236
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 37, 18

Conread position: 20-364
Cow position: chr5:39165413-39165050 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 0

Conread position: 20-364
Cow position: chr5:61273777-61273434 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 233

Conread position: 21-358
Cow position: chr5:61020448-61020107 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 222
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 97, 17

Conread position: 21-362
Cow position: chr5:52804723-52805076 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 19

Conread position: 21-364
Cow position: chr5:27569550-27569902 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 255
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 19, 80

Conread position: 21-364
Cow position: chr5:32733855-32733505 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 304

Conread position: 22-249
Cow position: chr5:54619862-54620093 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 158
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 28, 16

Conread position: 23-364
Cow position: chr5:12682110-12681765 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 15

Conread position: 23-364
Cow position: chr5:76124159-76123804 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 234
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 38, 16

Conread position: 24-363
Cow position: chr5:27683352-27683023 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 243
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 25, 14

Conread position: 25-278
Cow position: chr5:23960715-23960451 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 191
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 32, 13

Conread position: 25-329
Cow position: chr5:18663640-18663957 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 191
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 32, 13

Conread position: 25-329
Cow position: chr5:46775485-46775798 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 221
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 32, 13

Conread position: 25-358
Cow position: chr5:24576306-24576655 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 13

Conread position: 25-359
Cow position: chr5:26079825-26079476 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 13

Conread position: 25-359
Cow position: chr5:48468882-48468534 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 13

Conread position: 25-359
Cow position: chr5:59060012-59060363 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 250
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 32, 18

Conread position: 25-364
Cow position: chr5:2530669-2531018 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 13

Conread position: 25-364
Cow position: chr5:3963870-3964218 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 13

Conread position: 25-364
Cow position: chr5:18665354-18665709 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 13

Conread position: 25-364
Cow position: chr5:35299456-35299811 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 13

Conread position: 25-364
Cow position: chr5:46663398-46663746 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 14

Conread position: 29-364
Cow position: chr5:34202349-34202687 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 11

Conread position: 30-358
Cow position: chr5:41551526-41551186 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 29

Conread position: 30-364
Cow position: chr5:29008756-29009107 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 0

Conread position: 30-364
Cow position: chr5:45182700-45182362 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 210

Conread position: 31-332
Cow position: chr5:9687008-9686701 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 9

Conread position: 31-363
Cow position: chr5:23227659-23228002 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 7

Conread position: 31-364
Cow position: chr5:24329693-24330046 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 9

Conread position: 38-359
Cow position: chr5:14379574-14379905 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 38-359
Cow position: chr5:31705982-31706318 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 237
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 19, 0

Conread position: 38-359
Cow position: chr5:53714661-53714996 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 0

Conread position: 38-364
Cow position: chr5:26090424-26090081 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 246
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 19, 52

Conread position: 38-365
Cow position: chr5:41530165-41529823 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 40-364
Cow position: chr5:26769220-26769558 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 155

Conread position: 45-357
Cow position: chr5:16104352-16104030 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 208
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 16, 302

Conread position: 65-321
Cow position: chr5:12185093-12185362 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 199
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 85, 0

Conread position: 73-364
Cow position: chr5:31102152-31101848 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 215
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 78, 0

Conread position: 98-267
Cow position: chr5:33345057-33344895 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 130
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 14, 40

Conread position: 132-364
Cow position: chr5:46659234-46659479 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 180
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 103, 7

Conread position: 137-276
Cow position: chr5:27652477-27652338 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 113
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 21, 49

Conread position: 143-359
Cow position: chr5:54932700-54932475 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 172
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 15, 0

Conread position: 143-364
Cow position: chr5:46005864-46005636 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 167
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 108, 0

Conread position: 164-303
Cow position: chr5:57976891-57977038 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 113
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 77, 0

Conread position: 175-364
Cow position: chr5:25207187-25206995 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 150
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 66, 0

Conread position: 242-364
Cow position: chr5:41962612-41962491 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 102
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 89, 75

Conread position: 1-277
Cow position: chr6:24238562-24238847 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 212
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 56, 26

Conread position: 1-360
Cow position: chr6:15281032-15280657 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-360
Cow position: chr6:21686412-21686773 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 26

Conread position: 1-360
Cow position: chr6:21971188-21971559 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-360
Cow position: chr6:65841100-65841480 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 266
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 56, 37

Conread position: 1-362
Cow position: chr6:38231790-38232163 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chr6:1823735-1823360 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chr6:3278439-3278061 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chr6:3889976-3889590 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chr6:8201243-8201621 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chr6:17045574-17045948 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chr6:20561598-20561220 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 37

Conread position: 1-364
Cow position: chr6:29311005-29311380 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 37

Conread position: 1-364
Cow position: chr6:34893496-34893120 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chr6:36525556-36525932 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chr6:50497939-50497569 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chr6:64713061-64713431 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 258
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 32, 15

Conread position: 1-364
Cow position: chr6:64714628-64715005 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 15

Conread position: 1-365
Cow position: chr6:55544816-55544436 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 41

Conread position: 2-332
Cow position: chr6:2885757-2886077 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 36

Conread position: 2-362
Cow position: chr6:59919761-59919391 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 14

Conread position: 2-364
Cow position: chr6:913144-913518 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 36

Conread position: 2-364
Cow position: chr6:39437156-39437530 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 11

Conread position: 2-364
Cow position: chr6:65900397-65900029 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 262
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 59, 36

Conread position: 3-363
Cow position: chr6:6476937-6476566 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 35

Conread position: 4-360
Cow position: chr6:65908947-65909312 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 34

Conread position: 4-364
Cow position: chr6:3488878-3488511 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 34

Conread position: 4-364
Cow position: chr6:5951721-5951347 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 23

Conread position: 5-227
Cow position: chr6:52735919-52736147 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 165
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 52, 33

Conread position: 5-364
Cow position: chr6:6566127-6566502 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 33

Conread position: 5-364
Cow position: chr6:12093338-12092973 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 33

Conread position: 5-364
Cow position: chr6:30478614-30478980 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 33

Conread position: 5-364
Cow position: chr6:43617230-43617606 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 33

Conread position: 6-364
Cow position: chr6:2554220-2554597 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 0

Conread position: 6-364
Cow position: chr6:15141661-15141286 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 17

Conread position: 6-364
Cow position: chr6:30275666-30275289 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 17

Conread position: 7-364
Cow position: chr6:27468776-27469141 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 16

Conread position: 10-359
Cow position: chr6:26671337-26670979 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 15

Conread position: 13-311
Cow position: chr6:51190072-51190373 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 196
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 44, 25

Conread position: 13-360
Cow position: chr6:701473-701840 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 15-358
Cow position: chr6:68026306-68026665 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 22

Conread position: 15-359
Cow position: chr6:7141940-7141587 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 23

Conread position: 15-359
Cow position: chr6:17598757-17598395 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 23

Conread position: 15-362
Cow position: chr6:48367955-48368279 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 239
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 120, 23

Conread position: 15-364
Cow position: chr6:13103584-13103947 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 254
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 42, 23

Conread position: 15-364
Cow position: chr6:28062873-28063227 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 23

Conread position: 15-364
Cow position: chr6:39907681-39908039 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 23

Conread position: 16-364
Cow position: chr6:10054150-10054502 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 22

Conread position: 16-364
Cow position: chr6:40314439-40314791 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 22

Conread position: 17-233
Cow position: chr6:28106238-28106016 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 161
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 40, 21

Conread position: 17-303
Cow position: chr6:7180135-7179853 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 10

Conread position: 17-333
Cow position: chr6:42360139-42359824 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 213
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 231, 22

Conread position: 17-364
Cow position: chr6:27530472-27530114 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 21

Conread position: 18-364
Cow position: chr6:65007373-65007725 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 22

Conread position: 18-364
Cow position: chr6:68362787-68362430 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 22

Conread position: 25-329
Cow position: chr6:27169111-27169428 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 227
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 32, 13

Conread position: 25-329
Cow position: chr6:28491979-28491662 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 13

Conread position: 25-358
Cow position: chr6:57870469-57870120 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 13

Conread position: 25-359
Cow position: chr6:1405697-1405352 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 13

Conread position: 25-359
Cow position: chr6:34126886-34127233 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 249
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 32, 13

Conread position: 25-364
Cow position: chr6:2374246-2374593 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 13

Conread position: 25-364
Cow position: chr6:13978078-13978410 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 242
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 32, 13

Conread position: 25-364
Cow position: chr6:40274794-40275148 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 13

Conread position: 25-364
Cow position: chr6:44028590-44028937 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 248
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 32, 13

Conread position: 25-364
Cow position: chr6:65822597-65822237 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 249
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 35, 13

Conread position: 29-305
Cow position: chr6:60384534-60384815 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 183
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 113, 256

Conread position: 29-364
Cow position: chr6:35421023-35420693 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 47

Conread position: 30-332
Cow position: chr6:63198596-63198289 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 203
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 26, 13

Conread position: 30-364
Cow position: chr6:42926919-42927273 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 16

Conread position: 31-363
Cow position: chr6:19453474-19453811 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 13

Conread position: 32-330
Cow position: chr6:66231356-66231656 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 215
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 29, 216

Conread position: 34-361
Cow position: chr6:2955408-2955069 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 216
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 23, 183

Conread position: 35-360
Cow position: chr6:42723376-42723039 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 170

Conread position: 38-247
Cow position: chr6:33459127-33459352 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 162
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 19, 144

Conread position: 38-333
Cow position: chr6:11353285-11353597 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 206
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 90, 18

Conread position: 38-364
Cow position: chr6:13943460-13943800 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 65

Conread position: 38-364
Cow position: chr6:28274535-28274873 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 186

Conread position: 38-364
Cow position: chr6:65927492-65927826 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 39-364
Cow position: chr6:58409360-58409023 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 242

Conread position: 40-332
Cow position: chr6:11278144-11277846 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 58

Conread position: 40-361
Cow position: chr6:42564496-42564830 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 216
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 18, 64

Conread position: 40-364
Cow position: chr6:65880415-65880756 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 0

Conread position: 47-364
Cow position: chr6:8761744-8761411 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 0

Conread position: 56-364
Cow position: chr6:10559072-10558770 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 227
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 108, 38

Conread position: 126-360
Cow position: chr6:40554944-40554707 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 172
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 24, 107

Conread position: 132-364
Cow position: chr6:37115788-37116028 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 182
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 29, 21

Conread position: 164-364
Cow position: chr6:33388519-33388723 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 167
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 0

Conread position: 189-360
Cow position: chr6:13317776-13317600 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 134
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 52, 0

Conread position: 205-364
Cow position: chr6:49520667-49520510 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 122
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 127, 24

Conread position: 1-247
Cow position: chr7:13538127-13537871 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 189
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 56, 37

Conread position: 1-332
Cow position: chr7:38396827-38397165 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-360
Cow position: chr7:39791337-39791715 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-361
Cow position: chr7:14139992-14139620 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 37

Conread position: 1-364
Cow position: chr7:447019-446652 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 26

Conread position: 1-364
Cow position: chr7:1373049-1372673 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chr7:3154385-3154759 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 15

Conread position: 1-364
Cow position: chr7:21235410-21235032 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 41

Conread position: 1-364
Cow position: chr7:21985000-21985378 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 37

Conread position: 1-364
Cow position: chr7:24808868-24808488 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chr7:27786232-27786603 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chr7:34485515-34485887 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 26

Conread position: 1-364
Cow position: chr7:35287962-35287581 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 37

Conread position: 1-364
Cow position: chr7:46902473-46902097 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 27

Conread position: 1-364
Cow position: chr7:54602450-54602830 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 2-361
Cow position: chr7:58378587-58378216 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 241
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 55, 36

Conread position: 2-364
Cow position: chr7:60857746-60857391 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 35

Conread position: 2-364
Cow position: chr7:63020458-63020832 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 36

Conread position: 3-364
Cow position: chr7:55538314-55537938 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 35

Conread position: 4-364
Cow position: chr7:67798458-67798829 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 34

Conread position: 5-209
Cow position: chr7:30156684-30156471 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 161
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 52, 33

Conread position: 5-353
Cow position: chr7:41876873-41876527 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 230
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 62, 33

Conread position: 5-360
Cow position: chr7:25439139-25439494 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 253
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 11, 34

Conread position: 5-364
Cow position: chr7:20799812-20799463 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 251
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 61, 33

Conread position: 6-156
Cow position: chr7:68779251-68779102 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 111
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 51, 14

Conread position: 6-332
Cow position: chr7:1400750-1400417 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 241
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 34, 17

Conread position: 6-364
Cow position: chr7:21128046-21127678 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 33

Conread position: 11-364
Cow position: chr7:53990374-53990722 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 230, 9

Conread position: 13-361
Cow position: chr7:20307172-20306816 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 253
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 44, 25

Conread position: 13-364
Cow position: chr7:27143953-27144306 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 252
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 44, 25

Conread position: 15-359
Cow position: chr7:27102496-27102140 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 255
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 45, 23

Conread position: 16-363
Cow position: chr7:39109094-39108751 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 254
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 24, 91

Conread position: 16-364
Cow position: chr7:26883760-26884109 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 251
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 41, 27

Conread position: 16-364
Cow position: chr7:48633024-48633375 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 23

Conread position: 18-359
Cow position: chr7:37416636-37416987 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 235
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 21, 236

Conread position: 20-222
Cow position: chr7:47050043-47050251 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 152
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 37, 18

Conread position: 20-360
Cow position: chr7:55281178-55280829 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 238
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 16, 0

Conread position: 20-364
Cow position: chr7:26890426-26890780 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 18

Conread position: 20-364
Cow position: chr7:51013595-51013948 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 20

Conread position: 22-290
Cow position: chr7:25686584-25686312 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 184
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 36, 15

Conread position: 23-364
Cow position: chr7:21309846-21310188 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 15

Conread position: 25-250
Cow position: chr7:6720172-6720404 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 168
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 32, 13

Conread position: 25-359
Cow position: chr7:3301529-3301180 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 246
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 32, 13

Conread position: 25-360
Cow position: chr7:54515484-54515145 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 223
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 32, 133

Conread position: 25-364
Cow position: chr7:17248-16893 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 13

Conread position: 25-364
Cow position: chr7:3235058-3234704 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 13

Conread position: 25-364
Cow position: chr7:6643248-6642899 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 13

Conread position: 25-364
Cow position: chr7:11467103-11466758 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 13

Conread position: 26-271
Cow position: chr7:20106912-20106676 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 172
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 31, 12

Conread position: 30-335
Cow position: chr7:41870300-41869982 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 71

Conread position: 30-364
Cow position: chr7:67416674-67417022 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 8

Conread position: 31-303
Cow position: chr7:35297964-35297683 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 9

Conread position: 32-357
Cow position: chr7:68858462-68858123 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 86

Conread position: 37-364
Cow position: chr7:68436406-68436066 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 8

Conread position: 38-285
Cow position: chr7:68076178-68076434 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 176
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 19, 26

Conread position: 38-315
Cow position: chr7:20294508-20294799 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 212
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 19, 38

Conread position: 38-359
Cow position: chr7:6649017-6648681 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 38-359
Cow position: chr7:61558849-61559187 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 18

Conread position: 38-364
Cow position: chr7:522205-521865 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 19

Conread position: 38-364
Cow position: chr7:1449131-1449464 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 241
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 19, 201

Conread position: 38-364
Cow position: chr7:26025683-26026018 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 5

Conread position: 40-364
Cow position: chr7:52120441-52120100 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 234
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 17, 0

Conread position: 44-364
Cow position: chr7:993877-994215 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 248
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 20, 62

Conread position: 47-364
Cow position: chr7:1358028-1357702 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 265

Conread position: 47-364
Cow position: chr7:21976088-21975758 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 9

Conread position: 48-364
Cow position: chr7:38536167-38536497 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 237
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 9, 17

Conread position: 57-364
Cow position: chr7:41489793-41490096 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 26

Conread position: 60-358
Cow position: chr7:45949488-45949176 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 222
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 77, 0

Conread position: 61-364
Cow position: chr7:51911691-51911374 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 222

Conread position: 65-364
Cow position: chr7:11446221-11446535 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 0

Conread position: 122-360
Cow position: chr7:6489580-6489335 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 0

Conread position: 128-364
Cow position: chr7:26893486-26893729 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 145
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 123, 0

Conread position: 139-364
Cow position: chr7:5662123-5662359 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 170
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 111, 0

Conread position: 139-364
Cow position: chr7:67426163-67426396 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 178
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 11, 0

Conread position: 148-356
Cow position: chr7:1611446-1611237 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 157
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 18, 96

Conread position: 184-364
Cow position: chr7:20528882-20528696 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 139
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 64, 0

Conread position: 184-364
Cow position: chr7:20555510-20555693 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 139
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 147, 0

Conread position: 205-364
Cow position: chr7:21241979-21241817 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 127
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 32, 22

Conread position: 219-360
Cow position: chr7:24421664-24421807 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 111
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 22, 40

Conread position: 231-364
Cow position: chr7:47050545-47050680 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 103
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 12, 0

Conread position: 1-188
Cow position: chr8:3784369-3784564 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 142
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 32, 25

Conread position: 1-325
Cow position: chr8:61198328-61197991 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 41

Conread position: 1-357
Cow position: chr8:32319759-32319386 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-358
Cow position: chr8:9540701-9540331 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 37

Conread position: 1-360
Cow position: chr8:50993580-50993950 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 41

Conread position: 1-361
Cow position: chr8:59263105-59262730 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chr8:3857224-3856848 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 42

Conread position: 1-364
Cow position: chr8:4686183-4686559 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chr8:8910024-8910386 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chr8:17310814-17311183 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 26

Conread position: 1-364
Cow position: chr8:19050275-19050650 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 41

Conread position: 1-364
Cow position: chr8:19328743-19329122 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 37

Conread position: 1-364
Cow position: chr8:29441039-29440661 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chr8:36636754-36636375 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chr8:36637869-36637490 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chr8:45795954-45795577 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chr8:47074058-47074436 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 37

Conread position: 1-364
Cow position: chr8:49214217-49214593 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chr8:60059992-60060370 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 2-361
Cow position: chr8:8904706-8904360 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 256
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 169, 36

Conread position: 2-363
Cow position: chr8:11757511-11757869 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 2-363
Cow position: chr8:44693097-44693458 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 23

Conread position: 2-364
Cow position: chr8:38390162-38390534 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 18

Conread position: 4-231
Cow position: chr8:25777083-25776848 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 164
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 53, 34

Conread position: 4-364
Cow position: chr8:8402408-8402035 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 34

Conread position: 4-364
Cow position: chr8:46945337-46944963 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 34

Conread position: 4-364
Cow position: chr8:47662535-47662160 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 34

Conread position: 5-329
Cow position: chr8:11821106-11821451 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 238
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 52, 33

Conread position: 5-363
Cow position: chr8:27984009-27983630 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 0

Conread position: 5-364
Cow position: chr8:2171587-2171213 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 33

Conread position: 5-364
Cow position: chr8:8229992-8229615 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 33

Conread position: 5-364
Cow position: chr8:45161559-45161198 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 34

Conread position: 9-364
Cow position: chr8:23770436-23770806 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 29

Conread position: 12-364
Cow position: chr8:32632215-32631859 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 26

Conread position: 13-364
Cow position: chr8:45448249-45448615 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 94

Conread position: 14-364
Cow position: chr8:13735453-13735814 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 25

Conread position: 15-357
Cow position: chr8:8518771-8518421 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 25

Conread position: 15-359
Cow position: chr8:9735050-9735408 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 23

Conread position: 15-359
Cow position: chr8:12504803-12505159 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 23

Conread position: 15-359
Cow position: chr8:32439639-32439282 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 23

Conread position: 15-359
Cow position: chr8:47070007-47069645 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 23

Conread position: 15-364
Cow position: chr8:2885554-2885911 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 23

Conread position: 16-340
Cow position: chr8:11970758-11970423 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 63

Conread position: 16-364
Cow position: chr8:47884830-47885200 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 22

Conread position: 16-364
Cow position: chr8:53427140-53427494 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 17

Conread position: 17-364
Cow position: chr8:8316825-8316470 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 21

Conread position: 17-364
Cow position: chr8:25407266-25407615 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 21

Conread position: 17-364
Cow position: chr8:25522200-25522565 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 17-364
Cow position: chr8:38607717-38607352 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 267
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 43, 21

Conread position: 17-364
Cow position: chr8:44077215-44076855 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 21

Conread position: 17-364
Cow position: chr8:44244771-44244408 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 21

Conread position: 18-267
Cow position: chr8:8596089-8595827 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 197
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 39, 21

Conread position: 18-364
Cow position: chr8:45317315-45316961 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 22

Conread position: 20-361
Cow position: chr8:11055702-11056037 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 232
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 237, 18

Conread position: 21-202
Cow position: chr8:42161839-42161659 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 136
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 36, 8

Conread position: 25-286
Cow position: chr8:6065904-6065637 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 193
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 32, 13

Conread position: 25-329
Cow position: chr8:37657448-37657142 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 13

Conread position: 25-359
Cow position: chr8:27578222-27578569 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 13

Conread position: 25-359
Cow position: chr8:37931108-37931456 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 13

Conread position: 25-364
Cow position: chr8:8557317-8556981 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 13

Conread position: 25-364
Cow position: chr8:10748197-10748543 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 13

Conread position: 28-168
Cow position: chr8:51860179-51860035 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 110
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 9, 141

Conread position: 29-194
Cow position: chr8:11831562-11831730 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 120
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 28, 0

Conread position: 29-363
Cow position: chr8:42467213-42467544 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 239
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 17, 154

Conread position: 29-364
Cow position: chr8:32930321-32930677 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 11

Conread position: 30-358
Cow position: chr8:23216572-23216901 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 243
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 100, 187

Conread position: 30-364
Cow position: chr8:44036951-44036615 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 242
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 11, 183

Conread position: 30-364
Cow position: chr8:61035537-61035198 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 135

Conread position: 31-310
Cow position: chr8:27924941-27925236 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 218
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 26, 9

Conread position: 31-360
Cow position: chr8:47670276-47670618 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 9

Conread position: 38-304
Cow position: chr8:33429743-33430020 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 65

Conread position: 38-359
Cow position: chr8:26006938-26006605 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 232
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 19, 0

Conread position: 38-364
Cow position: chr8:8656391-8656049 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 38-364
Cow position: chr8:24916508-24916171 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 116

Conread position: 40-364
Cow position: chr8:1154481-1154142 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 240
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 105, 337

Conread position: 62-364
Cow position: chr8:39196367-39196049 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 0

Conread position: 90-360
Cow position: chr8:46091982-46091699 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 205
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 50, 0

Conread position: 95-357
Cow position: chr8:50289268-50288991 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 198
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 42, 0

Conread position: 142-361
Cow position: chr8:12716299-12716514 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 153
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 192, 30

Conread position: 180-364
Cow position: chr8:45189069-45189262 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 148
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 65, 0

Conread position: 190-364
Cow position: chr8:36292156-36292335 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 143
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 58, 0

Conread position: 217-361
Cow position: chr8:44121895-44122042 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 114
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 24, 132

Conread position: 234-365
Cow position: chr8:51668227-51668094 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 103
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 10, 86

Conread position: 1-204
Cow position: chr9:10855639-10855852 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 151
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 56, 41

Conread position: 1-332
Cow position: chr9:5003453-5003796 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-353
Cow position: chr9:10321261-10321630 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-360
Cow position: chr9:31806980-31807348 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chr9:1996476-1996094 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 267
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chr9:7001994-7002371 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chr9:16175208-16175586 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chr9:27034150-27034525 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 25

Conread position: 1-364
Cow position: chr9:28020987-28021366 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 28

Conread position: 1-364
Cow position: chr9:29629307-29628928 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 42

Conread position: 1-364
Cow position: chr9:37163367-37162989 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 37

Conread position: 1-364
Cow position: chr9:42309122-42309501 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 307

Conread position: 1-364
Cow position: chr9:42568313-42568689 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chr9:47001653-47002020 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 267
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 69, 26

Conread position: 1-364
Cow position: chr9:51183268-51182883 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chr9:59456159-59455780 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chr9:59483224-59482854 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 37

Conread position: 1-364
Cow position: chr9:60278583-60278203 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 37

Conread position: 2-308
Cow position: chr9:3868058-3867744 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 214
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 147, 36

Conread position: 2-332
Cow position: chr9:18836224-18836562 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 229
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 17, 72

Conread position: 2-364
Cow position: chr9:37971765-37971388 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 14

Conread position: 4-360
Cow position: chr9:418088-417716 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 39

Conread position: 4-360
Cow position: chr9:3548727-3548358 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 34

Conread position: 5-280
Cow position: chr9:2629968-2630249 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 183
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 144, 18

Conread position: 5-287
Cow position: chr9:3006828-3006535 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 200
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 52, 33

Conread position: 5-359
Cow position: chr9:2488519-2488158 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 33

Conread position: 5-364
Cow position: chr9:223086-222730 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 249
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 140, 33

Conread position: 5-364
Cow position: chr9:2170502-2170874 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 33

Conread position: 5-364
Cow position: chr9:17064942-17064579 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 256
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 52, 33

Conread position: 5-364
Cow position: chr9:30671815-30672187 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 17

Conread position: 5-364
Cow position: chr9:59174713-59174338 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 33

Conread position: 6-364
Cow position: chr9:59535543-59535916 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 13

Conread position: 10-364
Cow position: chr9:60652012-60651649 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 224
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 50, 15

Conread position: 13-330
Cow position: chr9:64118309-64118613 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 238
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 45, 25

Conread position: 13-364
Cow position: chr9:4984232-4984587 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 248
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 44, 25

Conread position: 13-364
Cow position: chr9:54360067-54360420 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 27

Conread position: 15-359
Cow position: chr9:27933548-27933908 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 23

Conread position: 15-364
Cow position: chr9:4672061-4672426 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 23

Conread position: 15-364
Cow position: chr9:34243144-34242779 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 23

Conread position: 16-364
Cow position: chr9:830097-829741 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 22

Conread position: 16-364
Cow position: chr9:831971-831615 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 22

Conread position: 18-249
Cow position: chr9:651634-651390 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 168
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 115, 7

Conread position: 18-266
Cow position: chr9:3585760-3586020 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 185
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 39, 22

Conread position: 18-364
Cow position: chr9:2500838-2500477 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 24

Conread position: 18-364
Cow position: chr9:31020263-31020627 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 22

Conread position: 20-363
Cow position: chr9:20310250-20309914 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 243
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 224, 19

Conread position: 20-364
Cow position: chr9:6051580-6051231 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 239
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 22, 76

Conread position: 21-364
Cow position: chr9:2199570-2199925 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 247
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 21, 206

Conread position: 21-364
Cow position: chr9:3155503-3155851 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 144

Conread position: 21-364
Cow position: chr9:13219807-13220140 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 17

Conread position: 25-271
Cow position: chr9:12401710-12401967 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 191
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 35, 13

Conread position: 25-286
Cow position: chr9:33834809-33834535 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 200
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 32, 13

Conread position: 25-286
Cow position: chr9:50789035-50789304 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 199
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 32, 13

Conread position: 25-316
Cow position: chr9:25755739-25755438 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 214
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 32, 13

Conread position: 25-358
Cow position: chr9:45872818-45873161 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 13

Conread position: 25-359
Cow position: chr9:16267825-16268175 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 13

Conread position: 25-359
Cow position: chr9:25483336-25483687 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 246
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 35, 13

Conread position: 25-359
Cow position: chr9:31194703-31194353 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 13

Conread position: 25-364
Cow position: chr9:46626335-46625980 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 249
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 32, 13

Conread position: 30-364
Cow position: chr9:28626562-28626222 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 258

Conread position: 30-364
Cow position: chr9:37130075-37129718 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 261
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 10, 77

Conread position: 31-328
Cow position: chr9:6757041-6757352 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 221
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 26, 7

Conread position: 34-364
Cow position: chr9:15071988-15072335 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 8

Conread position: 36-331
Cow position: chr9:2185430-2185744 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 222
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 21, 178

Conread position: 38-360
Cow position: chr9:59443331-59443667 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 38-364
Cow position: chr9:28677451-28677794 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 244
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 22, 18

Conread position: 38-364
Cow position: chr9:36723979-36724320 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 39-361
Cow position: chr9:12846046-12845718 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 225
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 18, 42

Conread position: 40-364
Cow position: chr9:1294338-1293997 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 235
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 17, 0

Conread position: 41-364
Cow position: chr9:7062627-7062274 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 246
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 20, 0

Conread position: 44-360
Cow position: chr9:34107236-34106905 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 228
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 83, 244

Conread position: 44-363
Cow position: chr9:793022-792696 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 50

Conread position: 45-361
Cow position: chr9:3567370-3567037 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 49-292
Cow position: chr9:7646713-7646460 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 173
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 69, 105

Conread position: 49-350
Cow position: chr9:9577093-9577404 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 212
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 21, 15

Conread position: 55-361
Cow position: chr9:22650649-22650972 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 205

Conread position: 60-364
Cow position: chr9:1979446-1979757 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 230

Conread position: 65-364
Cow position: chr9:32968244-32968560 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 229
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 35, 0

Conread position: 66-359
Cow position: chr9:1252462-1252154 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 217
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 61, 0

Conread position: 66-364
Cow position: chr9:29028724-29028410 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 0

Conread position: 143-359
Cow position: chr9:131603-131382 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 155
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 94, 143

Conread position: 148-364
Cow position: chr9:2697339-2697112 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 155
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 7, 0

Conread position: 177-364
Cow position: chr9:8969298-8969107 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 145
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 124, 0

Conread position: 179-325
Cow position: chr9:3356345-3356203 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 111
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 64, 39

Conread position: 239-364
Cow position: chr9:37064105-37063976 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 102
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 94, 0

Conread position: 1-273
Cow position: chrX:23276465-23276748 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 208
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 60, 37

Conread position: 1-360
Cow position: chrX:30232758-30232384 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chrX:1546280-1546659 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chrX:2483290-2482914 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 37

Conread position: 1-364
Cow position: chrX:13413770-13413391 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chrX:15598275-15598654 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chrX:16698647-16699025 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chrX:18955169-18954799 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chrX:21489584-21489955 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 19

Conread position: 1-364
Cow position: chrX:23392256-23391877 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chrX:23456225-23455850 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 37

Conread position: 1-364
Cow position: chrX:24485068-24484687 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 256
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chrX:26527321-26527700 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chrX:26759245-26758866 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 41

Conread position: 1-364
Cow position: chrX:29854218-29853839 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 41

Conread position: 2-259
Cow position: chrX:16565221-16565490 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 188
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 58, 36

Conread position: 2-329
Cow position: chrX:8963703-8963373 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 37

Conread position: 2-332
Cow position: chrX:2142661-2142988 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 11

Conread position: 2-332
Cow position: chrX:13052035-13052356 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 234
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 137, 36

Conread position: 2-359
Cow position: chrX:21270819-21270466 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 36

Conread position: 2-359
Cow position: chrX:22526254-22525885 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 11

Conread position: 2-360
Cow position: chrX:31079881-31080252 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 261
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 111, 27

Conread position: 2-362
Cow position: chrX:19185598-19185234 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 37

Conread position: 2-364
Cow position: chrX:970122-970490 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 18

Conread position: 2-364
Cow position: chrX:30174309-30173938 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 259
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 125, 18

Conread position: 5-260
Cow position: chrX:34987997-34988262 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 184
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 52, 34

Conread position: 5-358
Cow position: chrX:22619964-22619595 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 33

Conread position: 5-359
Cow position: chrX:24088752-24089121 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 33

Conread position: 5-362
Cow position: chrX:20698913-20698554 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 33

Conread position: 5-364
Cow position: chrX:30056026-30056395 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 259
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 137, 33

Conread position: 5-364
Cow position: chrX:38145410-38145784 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 33

Conread position: 6-294
Cow position: chrX:29794753-29794475 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 212
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 21, 14

Conread position: 6-364
Cow position: chrX:11669079-11668717 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 14

Conread position: 6-364
Cow position: chrX:24325800-24325421 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 54

Conread position: 6-364
Cow position: chrX:30710708-30711078 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 10

Conread position: 11-363
Cow position: chrX:16017769-16017418 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 9

Conread position: 12-364
Cow position: chrX:28635057-28634691 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 26

Conread position: 13-364
Cow position: chrX:18532363-18532722 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 25

Conread position: 13-364
Cow position: chrX:27426960-27426592 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 25

Conread position: 15-319
Cow position: chrX:21339762-21340077 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 23

Conread position: 15-357
Cow position: chrX:5324349-5324006 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 23

Conread position: 15-358
Cow position: chrX:8586454-8586812 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 23

Conread position: 15-359
Cow position: chrX:7029549-7029908 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 23

Conread position: 15-359
Cow position: chrX:7092967-7093318 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 24

Conread position: 15-359
Cow position: chrX:12289575-12289222 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 243
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 42, 23

Conread position: 15-359
Cow position: chrX:12341555-12341912 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 248
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 42, 23

Conread position: 15-359
Cow position: chrX:37848372-37848733 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 23

Conread position: 15-364
Cow position: chrX:2101227-2101583 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 23

Conread position: 15-364
Cow position: chrX:3422080-3421716 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 24

Conread position: 15-364
Cow position: chrX:16275051-16275401 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 24

Conread position: 15-364
Cow position: chrX:20316694-20316332 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 23

Conread position: 15-364
Cow position: chrX:31187874-31187511 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 23

Conread position: 16-168
Cow position: chrX:28553385-28553535 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 116
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 23, 0

Conread position: 16-273
Cow position: chrX:29284096-29284365 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 187
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 111, 261

Conread position: 16-357
Cow position: chrX:19927674-19928035 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 245
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 41, 23

Conread position: 16-364
Cow position: chrX:25332462-25332813 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 245
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 62, 23

Conread position: 17-364
Cow position: chrX:26767829-26767473 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 21

Conread position: 18-362
Cow position: chrX:24137032-24136672 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 22

Conread position: 18-364
Cow position: chrX:21290122-21289767 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 22

Conread position: 18-364
Cow position: chrX:40057696-40057340 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 22

Conread position: 20-279
Cow position: chrX:12672177-12671908 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 182
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 37, 18

Conread position: 20-291
Cow position: chrX:31192395-31192124 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 185
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 37, 18

Conread position: 21-353
Cow position: chrX:28651747-28651415 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 17

Conread position: 21-364
Cow position: chrX:22813771-22814109 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 242
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 36, 18

Conread position: 21-364
Cow position: chrX:30143020-30142664 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 17

Conread position: 23-336
Cow position: chrX:21586404-21586729 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 15

Conread position: 24-316
Cow position: chrX:5337204-5336896 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 220
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 13, 33

Conread position: 25-221
Cow position: chrX:6577067-6577270 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 145
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 32, 13

Conread position: 25-238
Cow position: chrX:12704543-12704320 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 160
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 32, 13

Conread position: 25-295
Cow position: chrX:3376853-3376571 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 200
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 14, 159

Conread position: 25-304
Cow position: chrX:29174227-29173939 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 205
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 35, 13

Conread position: 25-307
Cow position: chrX:22610680-22610973 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 205
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 37, 13

Conread position: 25-316
Cow position: chrX:9172994-9172692 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 221
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 35, 13

Conread position: 25-325
Cow position: chrX:28506568-28506256 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 224
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 102, 13

Conread position: 25-329
Cow position: chrX:20360561-20360245 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 13

Conread position: 25-357
Cow position: chrX:5284356-5284017 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 13

Conread position: 25-359
Cow position: chrX:8669963-8670312 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 245
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 32, 13

Conread position: 25-359
Cow position: chrX:9007713-9008061 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 13

Conread position: 25-359
Cow position: chrX:9193272-9192925 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 13

Conread position: 25-359
Cow position: chrX:24380677-24381030 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 245
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 25, 13

Conread position: 25-359
Cow position: chrX:28759250-28758908 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 237
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 32, 13

Conread position: 25-364
Cow position: chrX:2860430-2860077 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 13

Conread position: 25-364
Cow position: chrX:5395593-5395239 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 247
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 32, 13

Conread position: 25-364
Cow position: chrX:5862767-5863122 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 13

Conread position: 25-364
Cow position: chrX:11465628-11465277 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 250
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 35, 13

Conread position: 25-364
Cow position: chrX:12655377-12655031 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 13

Conread position: 25-364
Cow position: chrX:17479153-17478800 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 13

Conread position: 26-308
Cow position: chrX:234616-234899 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 193
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 31, 12

Conread position: 28-359
Cow position: chrX:7751276-7751618 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 0

Conread position: 28-364
Cow position: chrX:30046742-30046393 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 12

Conread position: 29-364
Cow position: chrX:24275044-24275397 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 65

Conread position: 29-364
Cow position: chrX:29951191-29950850 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 240
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 112, 9

Conread position: 29-364
Cow position: chrX:35017199-35017538 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 47

Conread position: 30-359
Cow position: chrX:6873701-6873351 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 247
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 9, 28

Conread position: 30-359
Cow position: chrX:30666567-30666219 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 28

Conread position: 30-364
Cow position: chrX:13007260-13006909 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 0

Conread position: 30-364
Cow position: chrX:21602261-21602612 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 16

Conread position: 30-364
Cow position: chrX:22777690-22778036 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 0

Conread position: 30-364
Cow position: chrX:39717174-39717522 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 10

Conread position: 31-330
Cow position: chrX:26628939-26628633 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 9

Conread position: 31-364
Cow position: chrX:20803515-20803850 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 9

Conread position: 31-364
Cow position: chrX:24122542-24122193 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 9

Conread position: 32-364
Cow position: chrX:4795300-4795642 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 34-364
Cow position: chrX:17668908-17668562 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 38-307
Cow position: chrX:25187041-25187324 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 207
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 19, 0

Conread position: 38-329
Cow position: chrX:28522316-28522011 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 221
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 19, 236

Conread position: 38-364
Cow position: chrX:2603430-2603773 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 46

Conread position: 38-364
Cow position: chrX:8454140-8454476 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 18

Conread position: 38-364
Cow position: chrX:13077308-13076970 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 38-364
Cow position: chrX:13097882-13097544 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 38-364
Cow position: chrX:13398733-13398392 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 246
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 22, 245

Conread position: 38-364
Cow position: chrX:15127862-15127517 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 0

Conread position: 38-364
Cow position: chrX:18218783-18219121 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 0

Conread position: 38-364
Cow position: chrX:22487570-22487913 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 38-364
Cow position: chrX:27990395-27990055 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 249
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 19, 193

Conread position: 40-315
Cow position: chrX:11534870-11535153 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 266

Conread position: 40-364
Cow position: chrX:12804468-12804138 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 63

Conread position: 40-364
Cow position: chrX:21828911-21829248 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 0

Conread position: 41-364
Cow position: chrX:5834774-5834446 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 15

Conread position: 45-202
Cow position: chrX:9124785-9124944 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 114
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 94, 0

Conread position: 45-331
Cow position: chrX:12182589-12182888 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 205
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 94, 12

Conread position: 46-358
Cow position: chrX:15180043-15179711 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 237
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 16, 203

Conread position: 49-364
Cow position: chrX:23046540-23046870 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 277

Conread position: 56-364
Cow position: chrX:21633181-21632859 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 171

Conread position: 60-358
Cow position: chrX:29092908-29093223 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 0

Conread position: 62-364
Cow position: chrX:12478132-12478444 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 222
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 78, 20

Conread position: 63-364
Cow position: chrX:14787460-14787148 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 0

Conread position: 67-364
Cow position: chrX:6909923-6909612 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 33

Conread position: 69-364
Cow position: chrX:1833252-1833552 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 212
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 70, 171

Conread position: 72-364
Cow position: chrX:23018748-23019048 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 204
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 14, 34

Conread position: 106-364
Cow position: chrX:27494155-27494432 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 207
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 22, 0

Conread position: 114-364
Cow position: chrX:6276123-6275869 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 157
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 134, 0

Conread position: 136-308
Cow position: chrX:28604311-28604136 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 139
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 95, 11

Conread position: 137-364
Cow position: chrX:26504684-26504913 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 175
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 25, 66

Conread position: 141-331
Cow position: chrX:29873065-29872871 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 139
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 22, 0

Conread position: 143-293
Cow position: chrX:982163-982317 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 120
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 108, 0

Conread position: 144-275
Cow position: chrX:24276010-24275873 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 110
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 16, 9

Conread position: 155-363
Cow position: chrX:12998052-12997840 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 157
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 83, 0

Conread position: 159-315
Cow position: chrX:28553587-28553744 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 117
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 82, 0

Conread position: 175-359
Cow position: chrX:28562682-28562494 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 139
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 66, 0

Conread position: 175-364
Cow position: chrX:21794628-21794822 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 149
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 57, 185

Conread position: 230-364
Cow position: chrX:29285021-29285158 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 112
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 18, 14

Conread position: 231-364
Cow position: chrX:16935968-16935833 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 103
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 10, 0

Conread position: 240-364
Cow position: chrX:2537174-2537047 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 106
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 93, 0