Cow genome map

Conread name: rsag05_b2.y1

Conread position: 1-200
Cow position: chr1:38417669-38417868 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 158
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 159, 47

Conread position: 1-332
Cow position: chr1:24652801-24653132 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 125

Conread position: 1-333
Cow position: chr1:79635457-79635131 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 57

Conread position: 1-334
Cow position: chr1:24442825-24442494 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 124

Conread position: 1-334
Cow position: chr1:30074406-30074739 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 274, 122

Conread position: 1-334
Cow position: chr1:33351107-33351436 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 243
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 274, 122

Conread position: 1-334
Cow position: chr1:72112542-72112875 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 126

Conread position: 1-334
Cow position: chr1:89769003-89768673 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 273, 122

Conread position: 1-334
Cow position: chr1:94661207-94661540 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 273, 122

Conread position: 2-209
Cow position: chr1:18240685-18240479 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 149
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 125, 30

Conread position: 2-334
Cow position: chr1:21088970-21089299 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 281, 121

Conread position: 2-334
Cow position: chr1:49972634-49972304 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 272, 121

Conread position: 2-334
Cow position: chr1:86546598-86546268 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 273, 121

Conread position: 3-209
Cow position: chr1:9378978-9378764 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 161
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 152, 120

Conread position: 3-209
Cow position: chr1:40056644-40056858 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 120

Conread position: 3-282
Cow position: chr1:69416741-69416486 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 196
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 60, 0

Conread position: 3-328
Cow position: chr1:33713611-33713944 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 120

Conread position: 3-332
Cow position: chr1:56192624-56192293 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-332
Cow position: chr1:76619939-76619612 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 120

Conread position: 3-333
Cow position: chr1:17940230-17939903 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 272, 125

Conread position: 3-333
Cow position: chr1:67833594-67833265 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 120

Conread position: 3-334
Cow position: chr1:1828770-1828441 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 272, 120

Conread position: 3-334
Cow position: chr1:3384400-3384070 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 121

Conread position: 3-334
Cow position: chr1:3933717-3933391 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 270, 70

Conread position: 3-334
Cow position: chr1:9260025-9260354 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr1:12060666-12060340 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 44

Conread position: 3-334
Cow position: chr1:17011195-17010869 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 34

Conread position: 3-334
Cow position: chr1:17035054-17034726 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr1:28874607-28874938 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 120

Conread position: 3-334
Cow position: chr1:29035840-29036167 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 93

Conread position: 3-334
Cow position: chr1:29363835-29364164 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 270, 118

Conread position: 3-334
Cow position: chr1:30533484-30533153 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr1:31364563-31364234 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 113

Conread position: 3-334
Cow position: chr1:33852809-33853138 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr1:38386893-38386571 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 240
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 229, 13

Conread position: 3-334
Cow position: chr1:40683202-40682873 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr1:42737970-42738295 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr1:50210302-50209973 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 120

Conread position: 3-334
Cow position: chr1:52357719-52357390 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr1:55275490-55275163 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 120

Conread position: 3-334
Cow position: chr1:56724684-56725013 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 243
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 157, 120

Conread position: 3-334
Cow position: chr1:57423292-57422963 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 127

Conread position: 3-334
Cow position: chr1:62243113-62242786 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr1:62804635-62804309 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr1:63604231-63603902 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 270, 118

Conread position: 3-334
Cow position: chr1:65387852-65388181 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr1:68606007-68605673 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr1:69404540-69404869 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 125

Conread position: 3-334
Cow position: chr1:72137527-72137856 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 234
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 197, 33

Conread position: 3-334
Cow position: chr1:74285139-74284813 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 239
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 160, 120

Conread position: 3-334
Cow position: chr1:79455413-79455086 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr1:81288675-81289004 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr1:82565653-82565975 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr1:85778915-85778583 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 246, 122

Conread position: 3-334
Cow position: chr1:86508368-86508036 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 244
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 58, 133

Conread position: 3-334
Cow position: chr1:90607338-90606996 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 120

Conread position: 3-334
Cow position: chr1:91891579-91891252 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 40

Conread position: 3-334
Cow position: chr1:93856054-93856381 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 44

Conread position: 3-334
Cow position: chr1:102433500-102433165 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 120

Conread position: 4-227
Cow position: chr1:40511480-40511247 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 183
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 156, 119

Conread position: 4-334
Cow position: chr1:10724122-10724447 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 279, 33

Conread position: 5-209
Cow position: chr1:31416966-31416762 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 168
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 115

Conread position: 5-331
Cow position: chr1:51965815-51966144 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 239
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 38, 120

Conread position: 5-334
Cow position: chr1:67002697-67003022 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 269, 67

Conread position: 5-334
Cow position: chr1:91900564-91900891 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 269, 118

Conread position: 7-334
Cow position: chr1:76750428-76750106 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 267, 116

Conread position: 7-334
Cow position: chr1:99914985-99915301 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 267, 116

Conread position: 8-334
Cow position: chr1:20830440-20830761 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 266, 115

Conread position: 25-209
Cow position: chr1:26517327-26517135 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 154
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 138, 98

Conread position: 25-331
Cow position: chr1:40966855-40966551 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 241
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 138, 98

Conread position: 25-334
Cow position: chr1:30520351-30520655 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 230
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 45, 15

Conread position: 25-334
Cow position: chr1:57364784-57364474 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 18

Conread position: 25-334
Cow position: chr1:77105456-77105158 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 234
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 254, 18

Conread position: 25-334
Cow position: chr1:88132338-88132645 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 249, 98

Conread position: 26-334
Cow position: chr1:5503527-5503832 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 248, 97

Conread position: 27-333
Cow position: chr1:48248468-48248771 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 221
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 136, 81

Conread position: 27-334
Cow position: chr1:57569395-57569700 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 247, 96

Conread position: 30-332
Cow position: chr1:62921126-62921425 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 244, 93

Conread position: 34-334
Cow position: chr1:102550075-102550364 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 218
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 135, 91

Conread position: 42-334
Cow position: chr1:82911250-82910960 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 232, 81

Conread position: 45-334
Cow position: chr1:31401878-31401586 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 202
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 117, 30

Conread position: 45-334
Cow position: chr1:58338422-58338709 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 229, 78

Conread position: 47-334
Cow position: chr1:89482534-89482817 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 210
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 237, 76

Conread position: 52-209
Cow position: chr1:18194099-18194264 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 131
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 111, 71

Conread position: 56-334
Cow position: chr1:72037957-72037685 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 212
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 218, 80

Conread position: 56-334
Cow position: chr1:101012591-101012319 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 217
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 104, 72

Conread position: 57-334
Cow position: chr1:19184726-19184446 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 210
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 165, 5

Conread position: 59-334
Cow position: chr1:30282256-30281972 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 203
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 110, 64

Conread position: 63-334
Cow position: chr1:6198698-6198424 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 60

Conread position: 64-334
Cow position: chr1:98617189-98616920 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 206
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 7, 55

Conread position: 77-334
Cow position: chr1:87435860-87436115 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 195
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 200, 46

Conread position: 88-334
Cow position: chr1:5355311-5355067 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 179
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 72, 35

Conread position: 92-334
Cow position: chr1:38476937-38477177 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 182
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 182, 31

Conread position: 92-334
Cow position: chr1:72985082-72985318 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 183
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 182, 11

Conread position: 102-334
Cow position: chr1:21996376-21996147 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 177
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 172, 21

Conread position: 121-334
Cow position: chr1:67287995-67288207 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 164
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 153, 39

Conread position: 189-334
Cow position: chr1:29904087-29903935 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 115
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 85, 14

Conread position: 205-334
Cow position: chr1:30716356-30716493 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 106
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 69, 0

Conread position: 205-334
Cow position: chr1:56165256-56165391 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 69, 99

Conread position: 205-334
Cow position: chr1:86594575-86594440 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 107
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 27, 0

Conread position: 205-334
Cow position: chr1:86594797-86594663 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 108
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 70, 0

Conread position: 206-334
Cow position: chr1:100594493-100594356 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 109
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 12, 0

Conread position: 208-334
Cow position: chr1:77114875-77114744 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 102
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 67, 0

Conread position: 209-334
Cow position: chr1:53365449-53365581 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 108
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 64, 10

Conread position: 1-161
Cow position: chr10:47788234-47788393 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 136
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 122, 0

Conread position: 1-209
Cow position: chr10:2119451-2119235 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 168
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 162, 122

Conread position: 1-334
Cow position: chr10:29631243-29630904 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 46

Conread position: 1-334
Cow position: chr10:29845100-29844767 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 123

Conread position: 1-334
Cow position: chr10:39778571-39778241 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 244
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 162, 122

Conread position: 2-333
Cow position: chr10:41151173-41150845 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 121

Conread position: 2-333
Cow position: chr10:41634952-41635274 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 58

Conread position: 3-208
Cow position: chr10:7280543-7280330 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 166
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 160, 120

Conread position: 3-209
Cow position: chr10:8291608-8291819 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 163
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 160, 40

Conread position: 3-209
Cow position: chr10:37771446-37771660 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 167
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 160, 120

Conread position: 3-209
Cow position: chr10:47908501-47908703 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 169
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 3-209
Cow position: chr10:62407220-62407006 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 164
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 160, 120

Conread position: 3-210
Cow position: chr10:22102796-22103009 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 170
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 25, 18

Conread position: 3-330
Cow position: chr10:25339658-25339983 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-331
Cow position: chr10:19494727-19494401 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 106

Conread position: 3-334
Cow position: chr10:7896919-7896590 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr10:10172297-10172626 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 120

Conread position: 3-334
Cow position: chr10:16927231-16927561 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 273, 120

Conread position: 3-334
Cow position: chr10:17433930-17434243 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 226
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 72, 0

Conread position: 3-334
Cow position: chr10:19143054-19142725 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 226, 120

Conread position: 3-334
Cow position: chr10:19706075-19705736 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 231
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 32, 157

Conread position: 3-334
Cow position: chr10:19841241-19841570 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 270, 120

Conread position: 3-334
Cow position: chr10:21488518-21488839 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 281, 120

Conread position: 3-334
Cow position: chr10:21898569-21898241 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 232
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 268, 23

Conread position: 3-334
Cow position: chr10:22644564-22644890 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 78

Conread position: 3-334
Cow position: chr10:32702318-32702647 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr10:33870847-33871181 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr10:39439714-39440042 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr10:39814836-39814509 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 119

Conread position: 3-334
Cow position: chr10:41158975-41159304 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr10:41878486-41878815 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 127

Conread position: 3-334
Cow position: chr10:55094828-55095155 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr10:57988434-57988120 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 120

Conread position: 5-193
Cow position: chr10:38544328-38544134 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 158
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 155, 118

Conread position: 7-209
Cow position: chr10:1379062-1379272 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 164
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 156, 116

Conread position: 10-209
Cow position: chr10:24784552-24784355 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 133
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 112, 0

Conread position: 10-334
Cow position: chr10:29732310-29732629 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 113

Conread position: 16-209
Cow position: chr10:32828448-32828648 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 153
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 147, 36

Conread position: 25-334
Cow position: chr10:10583706-10584032 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 98

Conread position: 25-334
Cow position: chr10:14334254-14333955 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 250, 63

Conread position: 25-334
Cow position: chr10:30683907-30683600 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 249, 98

Conread position: 30-334
Cow position: chr10:24124469-24124172 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 217
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 66, 94

Conread position: 33-334
Cow position: chr10:39039724-39039425 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 241, 90

Conread position: 45-334
Cow position: chr10:23409646-23409359 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 229, 78

Conread position: 46-331
Cow position: chr10:29101124-29100837 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 205
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 112, 79

Conread position: 56-334
Cow position: chr10:6556148-6556423 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 216
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 218, 67

Conread position: 80-334
Cow position: chr10:39209391-39209640 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 187
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 194, 50

Conread position: 203-334
Cow position: chr10:38841913-38842052 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 111
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 71, 0

Conread position: 206-334
Cow position: chr10:48169182-48169318 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 109
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 68, 0

Conread position: 209-334
Cow position: chr10:8340718-8340850 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 105
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 65, 48

Conread position: 1-212
Cow position: chr11:17281281-17281060 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 170
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 53, 124

Conread position: 1-333
Cow position: chr11:76372804-76372507 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 236
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 273, 18

Conread position: 1-334
Cow position: chr11:1488973-1488648 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 123

Conread position: 1-334
Cow position: chr11:9155952-9155627 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 246
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 276, 112

Conread position: 1-334
Cow position: chr11:67154878-67155207 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 277, 122

Conread position: 2-334
Cow position: chr11:10848653-10848968 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 247, 41

Conread position: 2-334
Cow position: chr11:50949127-50948782 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 111

Conread position: 3-194
Cow position: chr11:30122643-30122452 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 149
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 160, 66

Conread position: 3-195
Cow position: chr11:71330801-71331001 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 156
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 160, 120

Conread position: 3-200
Cow position: chr11:11989334-11989536 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 159
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 160, 88

Conread position: 3-208
Cow position: chr11:57626850-57626637 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 167
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 157, 120

Conread position: 3-209
Cow position: chr11:58135596-58135804 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 156
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 133, 97

Conread position: 3-278
Cow position: chr11:66730281-66730551 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 218
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 147, 196

Conread position: 3-330
Cow position: chr11:87142783-87143108 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 120

Conread position: 3-331
Cow position: chr11:4026410-4026084 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-333
Cow position: chr11:3261693-3262013 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 234
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 145, 59

Conread position: 3-333
Cow position: chr11:27657629-27657966 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 166

Conread position: 3-334
Cow position: chr11:3494191-3494520 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr11:3856407-3856740 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 33

Conread position: 3-334
Cow position: chr11:11590169-11590497 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 60

Conread position: 3-334
Cow position: chr11:12357200-12356871 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr11:15986453-15986773 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 43

Conread position: 3-334
Cow position: chr11:17119142-17118818 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 157

Conread position: 3-334
Cow position: chr11:19062875-19062546 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr11:19101292-19100961 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 120

Conread position: 3-334
Cow position: chr11:23881229-23881553 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 238
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 160, 107

Conread position: 3-334
Cow position: chr11:24394516-24394842 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 118

Conread position: 3-334
Cow position: chr11:26548731-26549056 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 97

Conread position: 3-334
Cow position: chr11:28228566-28228238 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr11:29667396-29667064 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 273, 120

Conread position: 3-334
Cow position: chr11:30208334-30208668 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 234
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 160, 11

Conread position: 3-334
Cow position: chr11:30253430-30253754 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 242
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 162, 41

Conread position: 3-334
Cow position: chr11:31927357-31927681 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 13

Conread position: 3-334
Cow position: chr11:32079586-32079257 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr11:32453033-32453362 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 120

Conread position: 3-334
Cow position: chr11:41169494-41169176 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 0

Conread position: 3-334
Cow position: chr11:47738338-47738017 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 240
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 157, 94

Conread position: 3-334
Cow position: chr11:47759075-47758751 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 260
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 76, 19

Conread position: 3-334
Cow position: chr11:49552950-49552626 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 232
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 205, 122

Conread position: 3-334
Cow position: chr11:61399903-61399574 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr11:63654132-63653804 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 226, 120

Conread position: 3-334
Cow position: chr11:67451694-67452023 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr11:67845370-67845041 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 120

Conread position: 3-334
Cow position: chr11:73134505-73134827 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 64

Conread position: 4-209
Cow position: chr11:7117614-7117827 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 166
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 156, 119

Conread position: 4-334
Cow position: chr11:23249267-23248939 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 270, 119

Conread position: 5-334
Cow position: chr11:39804927-39805265 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 244
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 43, 112

Conread position: 7-209
Cow position: chr11:38834242-38834032 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 163
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 156, 121

Conread position: 7-334
Cow position: chr11:72309832-72309509 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 267, 36

Conread position: 8-334
Cow position: chr11:50836461-50836137 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 115

Conread position: 17-334
Cow position: chr11:53285957-53285646 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 261, 106

Conread position: 25-209
Cow position: chr11:43513401-43513213 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 152
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 136, 98

Conread position: 25-334
Cow position: chr11:44582119-44581812 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 249, 98

Conread position: 25-334
Cow position: chr11:53430812-53430502 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 98

Conread position: 33-209
Cow position: chr11:11578514-11578326 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 148
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 33, 93

Conread position: 35-334
Cow position: chr11:44155766-44155470 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 214
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 128, 88

Conread position: 43-334
Cow position: chr11:4268936-4268636 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 208
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 120, 85

Conread position: 60-332
Cow position: chr11:40405794-40405525 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 196
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 103, 63

Conread position: 83-333
Cow position: chr11:12318745-12318497 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 194
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 191, 40

Conread position: 113-332
Cow position: chr11:21898372-21898156 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 157
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 171, 15

Conread position: 166-334
Cow position: chr11:4034053-4033879 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 130
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 109, 15

Conread position: 170-334
Cow position: chr11:21445987-21446161 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 130
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 37, 140

Conread position: 205-334
Cow position: chr11:44094228-44094091 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 106
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 69, 0

Conread position: 1-200
Cow position: chr12:35346017-35346224 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 165
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 158, 122

Conread position: 1-333
Cow position: chr12:48471400-48471081 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 0

Conread position: 3-209
Cow position: chr12:14660861-14660647 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 163
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 160, 120

Conread position: 3-209
Cow position: chr12:43913327-43913541 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 163
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 160, 120

Conread position: 3-328
Cow position: chr12:21092238-21091916 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 275, 125

Conread position: 3-330
Cow position: chr12:27854476-27854151 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr12:6405147-6404821 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 258
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 160, 40

Conread position: 3-334
Cow position: chr12:8676601-8676272 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr12:11099715-11100052 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 118

Conread position: 3-334
Cow position: chr12:20461741-20461415 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr12:20996597-20996283 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 226
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 23, 0

Conread position: 3-334
Cow position: chr12:21429497-21429826 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 272, 120

Conread position: 3-334
Cow position: chr12:22204223-22203894 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr12:24994474-24994145 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 120

Conread position: 3-334
Cow position: chr12:27931420-27931090 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 221, 120

Conread position: 3-334
Cow position: chr12:32655041-32655368 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 11

Conread position: 3-334
Cow position: chr12:37560502-37560821 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 120

Conread position: 7-201
Cow position: chr12:33042853-33043056 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 159
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 151, 116

Conread position: 14-334
Cow position: chr12:15950307-15949990 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 259, 114

Conread position: 19-205
Cow position: chr12:21482606-21482799 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 151
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 12, 55

Conread position: 25-332
Cow position: chr12:42858024-42857719 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 99

Conread position: 26-334
Cow position: chr12:17967327-17967624 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 228
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 89, 13

Conread position: 69-334
Cow position: chr12:21428038-21427775 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 193
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 91, 54

Conread position: 205-334
Cow position: chr12:25267731-25267594 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 107
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 69, 0

Conread position: 1-195
Cow position: chr13:34324311-34324109 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 166
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 159, 122

Conread position: 1-213
Cow position: chr13:34938705-34938925 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 174
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 159, 117

Conread position: 1-333
Cow position: chr13:9046021-9046345 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 249
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 46, 127

Conread position: 1-334
Cow position: chr13:13901135-13901462 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 241
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 162, 34

Conread position: 1-334
Cow position: chr13:31611044-31610719 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 120

Conread position: 2-334
Cow position: chr13:9298714-9299044 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 272, 121

Conread position: 2-334
Cow position: chr13:33335047-33334723 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 272, 54

Conread position: 2-334
Cow position: chr13:50193127-50192800 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 242
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 158, 50

Conread position: 3-209
Cow position: chr13:14186271-14186483 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 171
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 160, 21

Conread position: 3-209
Cow position: chr13:21697533-21697747 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 120

Conread position: 3-209
Cow position: chr13:47575361-47575575 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 169
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 156, 120

Conread position: 3-278
Cow position: chr13:3653044-3652775 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 212
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 120, 204

Conread position: 3-327
Cow position: chr13:15449884-15449575 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 240
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 44, 126

Conread position: 3-330
Cow position: chr13:16253247-16252923 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 125

Conread position: 3-331
Cow position: chr13:679020-679342 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 120

Conread position: 3-331
Cow position: chr13:11797438-11797112 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-332
Cow position: chr13:21838938-21838611 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 127

Conread position: 3-334
Cow position: chr13:4942654-4942983 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr13:5500730-5500401 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr13:6358393-6358722 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 120

Conread position: 3-334
Cow position: chr13:6666870-6666541 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr13:13326196-13326521 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 273, 40

Conread position: 3-334
Cow position: chr13:32923867-32923535 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 121

Conread position: 3-334
Cow position: chr13:32984075-32983746 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 127

Conread position: 3-334
Cow position: chr13:34041065-34040734 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 221, 120

Conread position: 3-334
Cow position: chr13:34343175-34343504 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 4-200
Cow position: chr13:20540986-20540780 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 163
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 157, 116

Conread position: 5-334
Cow position: chr13:50110724-50111056 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 118

Conread position: 7-334
Cow position: chr13:14401835-14401510 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 268, 116

Conread position: 8-209
Cow position: chr13:17309737-17309946 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 169
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 152, 122

Conread position: 8-334
Cow position: chr13:33524682-33524358 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 115

Conread position: 10-332
Cow position: chr13:34869248-34869567 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 264, 113

Conread position: 10-334
Cow position: chr13:49494904-49494581 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 234
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 24, 112

Conread position: 17-333
Cow position: chr13:60424033-60424342 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 256, 106

Conread position: 25-334
Cow position: chr13:21603000-21603311 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 207
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 18, 41

Conread position: 25-334
Cow position: chr13:32735901-32735594 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 249, 100

Conread position: 33-334
Cow position: chr13:31729603-31729308 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 215
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 130, 44

Conread position: 37-334
Cow position: chr13:30654127-30653827 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 244, 88

Conread position: 44-334
Cow position: chr13:5624436-5624151 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 225
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 140, 12

Conread position: 92-334
Cow position: chr13:3760271-3760031 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 182
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 182, 31

Conread position: 107-334
Cow position: chr13:30239720-30239945 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 172
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 168, 16

Conread position: 122-334
Cow position: chr13:54240053-54239843 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 156
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 151, 56

Conread position: 123-334
Cow position: chr13:11388595-11388803 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 160
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 150, 37

Conread position: 158-334
Cow position: chr13:61952670-61952858 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 136
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 46, 0

Conread position: 205-334
Cow position: chr13:15922997-15922860 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 108
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 69, 0

Conread position: 1-209
Cow position: chr14:48826417-48826633 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 168
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 160, 122

Conread position: 1-334
Cow position: chr14:17759755-17759426 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 52

Conread position: 3-200
Cow position: chr14:44552983-44553184 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 152
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 143, 122

Conread position: 3-208
Cow position: chr14:48601205-48600994 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 167
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 155, 53

Conread position: 3-209
Cow position: chr14:5514074-5514286 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 162
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 160, 63

Conread position: 3-209
Cow position: chr14:9046724-9046938 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 127

Conread position: 3-209
Cow position: chr14:44290208-44290422 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 167
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 157, 120

Conread position: 3-211
Cow position: chr14:12124038-12123823 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 120

Conread position: 3-330
Cow position: chr14:45677943-45677622 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 146

Conread position: 3-332
Cow position: chr14:27978500-27978827 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 120

Conread position: 3-334
Cow position: chr14:191189-191523 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 221, 125

Conread position: 3-334
Cow position: chr14:751711-752038 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 40

Conread position: 3-334
Cow position: chr14:1659599-1659928 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 120

Conread position: 3-334
Cow position: chr14:5530202-5530531 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr14:11153008-11152680 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 236
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 160, 120

Conread position: 3-334
Cow position: chr14:11476148-11475817 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 56

Conread position: 3-334
Cow position: chr14:12741892-12741573 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 231
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 125, 0

Conread position: 3-334
Cow position: chr14:13862953-13862629 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 52

Conread position: 3-334
Cow position: chr14:16342757-16342428 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 120

Conread position: 3-334
Cow position: chr14:16808178-16807850 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr14:16999913-16999578 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr14:17490194-17489867 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 116

Conread position: 3-334
Cow position: chr14:19327118-19326789 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr14:20783612-20783940 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr14:22030305-22029979 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr14:23256217-23255888 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr14:29046528-29046207 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 120

Conread position: 3-334
Cow position: chr14:33678207-33678535 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 112

Conread position: 3-334
Cow position: chr14:37225298-37225629 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr14:43559381-43559709 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 53

Conread position: 3-334
Cow position: chr14:45027857-45027529 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 119

Conread position: 3-334
Cow position: chr14:45188664-45188338 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 95

Conread position: 3-334
Cow position: chr14:45670891-45670558 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 120

Conread position: 3-334
Cow position: chr14:45710584-45710265 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 241
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 221, 35

Conread position: 3-334
Cow position: chr14:48253173-48252854 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 246
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 23, 11

Conread position: 5-334
Cow position: chr14:18417648-18417976 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 236
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 279, 118

Conread position: 7-209
Cow position: chr14:7473500-7473710 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 159
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 156, 116

Conread position: 8-334
Cow position: chr14:37411966-37411646 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 224
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 266, 90

Conread position: 11-334
Cow position: chr14:44380501-44380819 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 238
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 147, 45

Conread position: 16-334
Cow position: chr14:32448111-32448427 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 258, 107

Conread position: 25-334
Cow position: chr14:16918549-16918253 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 223
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 124, 98

Conread position: 25-334
Cow position: chr14:45086390-45086690 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 250, 26

Conread position: 26-334
Cow position: chr14:30595187-30594881 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 96

Conread position: 27-329
Cow position: chr14:45082284-45082583 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 247, 5

Conread position: 41-209
Cow position: chr14:13462639-13462814 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 135
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 17, 7

Conread position: 44-334
Cow position: chr14:46390444-46390158 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 230, 79

Conread position: 50-334
Cow position: chr14:33392734-33392451 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 73

Conread position: 70-334
Cow position: chr14:44690391-44690648 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 196
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 197, 46

Conread position: 77-334
Cow position: chr14:29774904-29774647 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 201
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 57, 46

Conread position: 81-334
Cow position: chr14:33490059-33490310 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 180
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 194, 39

Conread position: 85-334
Cow position: chr14:50112585-50112832 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 190
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 189, 38

Conread position: 89-334
Cow position: chr14:50142206-50142448 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 187
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 185, 34

Conread position: 1-170
Cow position: chr15:1879107-1878940 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 144
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 120, 0

Conread position: 1-193
Cow position: chr15:51675855-51676062 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 151
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 66, 129

Conread position: 1-195
Cow position: chr15:51716553-51716762 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 158
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 66, 129

Conread position: 1-209
Cow position: chr15:31360004-31360220 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 163
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 159, 122

Conread position: 1-209
Cow position: chr15:36624710-36624500 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 89

Conread position: 1-209
Cow position: chr15:44301966-44301750 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 154
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 164, 119

Conread position: 1-334
Cow position: chr15:5981499-5981829 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 243
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 162, 60

Conread position: 1-334
Cow position: chr15:7235465-7235794 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 242, 127

Conread position: 1-334
Cow position: chr15:14581223-14580889 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 122

Conread position: 1-334
Cow position: chr15:24794961-24795288 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 54

Conread position: 1-334
Cow position: chr15:35646541-35646212 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 258
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 159, 15

Conread position: 2-331
Cow position: chr15:13390180-13389856 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 35

Conread position: 2-334
Cow position: chr15:18577854-18578184 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 272, 121

Conread position: 2-334
Cow position: chr15:53410049-53410377 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 278, 22

Conread position: 3-207
Cow position: chr15:53299608-53299816 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 166
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 131, 122

Conread position: 3-209
Cow position: chr15:4672576-4672789 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 168
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 157, 100

Conread position: 3-209
Cow position: chr15:24296233-24296443 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 162
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 160, 93

Conread position: 3-278
Cow position: chr15:9912089-9911830 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 0

Conread position: 3-325
Cow position: chr15:4766333-4766654 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-331
Cow position: chr15:4686871-4687198 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 120

Conread position: 3-332
Cow position: chr15:19736913-19736586 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 221, 40

Conread position: 3-333
Cow position: chr15:5010489-5010162 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr15:107143-107472 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 120

Conread position: 3-334
Cow position: chr15:368505-368195 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 247
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 157, 65

Conread position: 3-334
Cow position: chr15:1299405-1299059 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 249
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 113, 207

Conread position: 3-334
Cow position: chr15:1765460-1765786 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 243
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 160, 82

Conread position: 3-334
Cow position: chr15:2077795-2078120 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 13

Conread position: 3-334
Cow position: chr15:2646507-2646182 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 50

Conread position: 3-334
Cow position: chr15:2926449-2926762 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 229
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 157, 115

Conread position: 3-334
Cow position: chr15:4386899-4387228 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr15:4726344-4726674 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr15:6154784-6154457 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 120

Conread position: 3-334
Cow position: chr15:6590974-6590645 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 105

Conread position: 3-334
Cow position: chr15:7564139-7564469 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 221, 120

Conread position: 3-334
Cow position: chr15:20411740-20412067 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 48

Conread position: 3-334
Cow position: chr15:28489010-28488683 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 243
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 160, 32

Conread position: 3-334
Cow position: chr15:33122520-33122851 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 120

Conread position: 3-334
Cow position: chr15:35752163-35751834 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr15:35898634-35898303 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 281, 120

Conread position: 3-334
Cow position: chr15:41659310-41659639 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 120

Conread position: 4-334
Cow position: chr15:7838412-7838740 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 270, 121

Conread position: 4-334
Cow position: chr15:32067465-32067138 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 269, 33

Conread position: 5-334
Cow position: chr15:18266631-18266294 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 60

Conread position: 7-209
Cow position: chr15:51218870-51219080 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 167
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 36, 63

Conread position: 10-334
Cow position: chr15:25205857-25205535 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 264, 113

Conread position: 10-334
Cow position: chr15:53339372-53339694 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 264, 41

Conread position: 22-209
Cow position: chr15:6383001-6382805 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 161
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 6, 102

Conread position: 25-325
Cow position: chr15:17036493-17036197 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 235
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 138, 57

Conread position: 25-334
Cow position: chr15:3260156-3259850 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 18

Conread position: 25-334
Cow position: chr15:42531080-42531390 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 232
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 129, 70

Conread position: 27-330
Cow position: chr15:4813750-4814057 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 87

Conread position: 27-333
Cow position: chr15:7546038-7546343 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 23

Conread position: 44-334
Cow position: chr15:6552598-6552309 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 208
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 119, 79

Conread position: 53-328
Cow position: chr15:32695357-32695624 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 191
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 95, 62

Conread position: 56-334
Cow position: chr15:1783527-1783802 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 202
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 100, 7

Conread position: 58-207
Cow position: chr15:4962812-4962968 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 122
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 96, 67

Conread position: 60-334
Cow position: chr15:4081036-4080764 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 212
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 214, 63

Conread position: 69-258
Cow position: chr15:19395750-19395565 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 146
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 102, 129

Conread position: 107-331
Cow position: chr15:29342766-29342532 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 166
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 59, 18

Conread position: 205-334
Cow position: chr15:16190437-16190300 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 106
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 69, 0

Conread position: 205-334
Cow position: chr15:44072014-44072150 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 111
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 69, 0

Conread position: 206-334
Cow position: chr15:6486849-6486976 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 104
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 62, 0

Conread position: 1-209
Cow position: chr16:42735781-42735572 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 164
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 161, 31

Conread position: 1-330
Cow position: chr16:28158366-28158706 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 43

Conread position: 1-334
Cow position: chr16:3330730-3331058 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 273, 51

Conread position: 1-334
Cow position: chr16:16240491-16240165 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 256
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 77, 61

Conread position: 2-330
Cow position: chr16:20202771-20203100 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 75

Conread position: 2-334
Cow position: chr16:8815306-8814979 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 272, 98

Conread position: 2-334
Cow position: chr16:18667181-18667514 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 250
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 30, 118

Conread position: 2-334
Cow position: chr16:29047821-29048151 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 237
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 161, 121

Conread position: 3-209
Cow position: chr16:25086412-25086625 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 120

Conread position: 3-209
Cow position: chr16:27732582-27732368 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 169
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 160, 120

Conread position: 3-271
Cow position: chr16:5485526-5485781 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 203
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 160, 55

Conread position: 3-331
Cow position: chr16:41753810-41753487 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 229
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 272, 120

Conread position: 3-333
Cow position: chr16:51084957-51085284 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr16:33328-33660 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 41

Conread position: 3-334
Cow position: chr16:838118-838441 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 18

Conread position: 3-334
Cow position: chr16:1566654-1566335 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 246
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 271, 94

Conread position: 3-334
Cow position: chr16:1861035-1861369 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 258, 120

Conread position: 3-334
Cow position: chr16:3088404-3088075 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr16:5119219-5118890 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr16:5662639-5662968 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr16:7675653-7675329 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 270, 40

Conread position: 3-334
Cow position: chr16:10439058-10439385 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 11

Conread position: 3-334
Cow position: chr16:19778849-19778523 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 19

Conread position: 3-334
Cow position: chr16:23535101-23534770 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr16:23984100-23984431 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr16:25342771-25343099 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 251
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 160, 120

Conread position: 3-334
Cow position: chr16:25442429-25442758 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr16:25456681-25456352 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 120

Conread position: 3-334
Cow position: chr16:27594307-27594636 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 120

Conread position: 3-334
Cow position: chr16:28169522-28169193 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr16:28470270-28469933 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 164

Conread position: 3-334
Cow position: chr16:37480055-37479727 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 249
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 160, 26

Conread position: 3-334
Cow position: chr16:40295361-40295038 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 40

Conread position: 3-334
Cow position: chr16:43896462-43896135 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 125

Conread position: 5-334
Cow position: chr16:5890802-5891125 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 268, 118

Conread position: 7-334
Cow position: chr16:2410125-2409805 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 231
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 156, 52

Conread position: 7-334
Cow position: chr16:2726409-2726086 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 267, 44

Conread position: 7-334
Cow position: chr16:12537144-12536823 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 249
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 137, 121

Conread position: 13-334
Cow position: chr16:25258613-25258931 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 261, 24

Conread position: 19-334
Cow position: chr16:34531105-34531416 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 24

Conread position: 25-279
Cow position: chr16:40557123-40556869 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 198
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 138, 103

Conread position: 25-333
Cow position: chr16:54324513-54324201 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 249, 100

Conread position: 25-334
Cow position: chr16:1433009-1433313 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 249, 98

Conread position: 25-334
Cow position: chr16:14664992-14664687 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 249, 98

Conread position: 25-334
Cow position: chr16:15185901-15186202 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 249, 98

Conread position: 25-334
Cow position: chr16:27712360-27712060 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 227
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 249, 23

Conread position: 37-334
Cow position: chr16:20193338-20193043 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 86

Conread position: 46-194
Cow position: chr16:23251127-23250971 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 123
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 115, 77

Conread position: 59-333
Cow position: chr16:4474751-4474474 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 65

Conread position: 98-334
Cow position: chr16:26664620-26664855 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 182
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 125, 25

Conread position: 206-332
Cow position: chr16:22800680-22800546 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 105
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 68, 0

Conread position: 1-200
Cow position: chr17:15372584-15372791 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 166
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 160, 122

Conread position: 1-334
Cow position: chr17:20086401-20086073 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 241
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 133, 23

Conread position: 2-201
Cow position: chr17:22133638-22133846 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 165
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 61, 122

Conread position: 2-209
Cow position: chr17:3654916-3654701 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 121

Conread position: 2-334
Cow position: chr17:20080508-20080193 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 272, 109

Conread position: 3-200
Cow position: chr17:20099102-20098898 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 166
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 160, 45

Conread position: 3-209
Cow position: chr17:2246712-2246498 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 171
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 157, 120

Conread position: 3-333
Cow position: chr17:11784232-11784569 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 246
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 79, 129

Conread position: 3-334
Cow position: chr17:182947-183274 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 123

Conread position: 3-334
Cow position: chr17:6069917-6070232 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 0

Conread position: 3-334
Cow position: chr17:11086353-11086024 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr17:13967301-13967629 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 109

Conread position: 3-334
Cow position: chr17:15141981-15141654 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr17:15437158-15437487 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr17:23323074-23322745 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 120

Conread position: 3-334
Cow position: chr17:24028630-24028302 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 121

Conread position: 3-334
Cow position: chr17:24783536-24783865 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr17:27793407-27793080 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 21

Conread position: 3-334
Cow position: chr17:28027130-28026804 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 270, 120

Conread position: 3-334
Cow position: chr17:29302130-29302460 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 128

Conread position: 3-334
Cow position: chr17:39049589-39049920 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 120

Conread position: 3-334
Cow position: chr17:40806181-40806510 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr17:43989876-43990205 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 4-333
Cow position: chr17:19267459-19267143 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 246
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 270, 54

Conread position: 4-334
Cow position: chr17:3640530-3640202 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 270, 119

Conread position: 5-331
Cow position: chr17:2169796-2170121 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 227
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 28, 91

Conread position: 8-334
Cow position: chr17:39819-40143 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 115

Conread position: 16-334
Cow position: chr17:6121172-6121489 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 259, 107

Conread position: 17-334
Cow position: chr17:17257302-17256987 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 257, 106

Conread position: 25-334
Cow position: chr17:6261255-6261562 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 250, 98

Conread position: 25-334
Cow position: chr17:15852089-15852396 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 249, 98

Conread position: 39-334
Cow position: chr17:2554865-2554572 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 235, 84

Conread position: 48-334
Cow position: chr17:20415041-20414757 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 219
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 112, 75

Conread position: 53-334
Cow position: chr17:19980712-19980436 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 221, 70

Conread position: 85-334
Cow position: chr17:22561353-22561591 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 185
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 188, 43

Conread position: 85-334
Cow position: chr17:34159183-34159429 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 198
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 99, 38

Conread position: 92-271
Cow position: chr17:20231281-20231450 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 130
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 31, 0

Conread position: 92-332
Cow position: chr17:16121144-16120905 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 192
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 92, 31

Conread position: 95-334
Cow position: chr17:33284222-33283989 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 186
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 89, 16

Conread position: 98-334
Cow position: chr17:45271650-45271416 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 176
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 176, 25

Conread position: 121-334
Cow position: chr17:2175411-2175623 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 162
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 6, 37

Conread position: 205-334
Cow position: chr17:34574309-34574446 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 107
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 69, 0

Conread position: 2-334
Cow position: chr18:16175039-16174710 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 121

Conread position: 2-334
Cow position: chr18:51482437-51482765 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 256
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 161, 41

Conread position: 3-200
Cow position: chr18:33752280-33752483 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 164
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 150, 120

Conread position: 3-207
Cow position: chr18:51695284-51695497 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 171
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 160, 127

Conread position: 3-209
Cow position: chr18:28972304-28972090 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 165
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 160, 120

Conread position: 3-333
Cow position: chr18:14417549-14417879 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-333
Cow position: chr18:24617715-24618043 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 120

Conread position: 3-334
Cow position: chr18:5534592-5534917 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 79

Conread position: 3-334
Cow position: chr18:14131973-14132301 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 95

Conread position: 3-334
Cow position: chr18:19353949-19354278 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr18:23799231-23799555 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 93

Conread position: 3-334
Cow position: chr18:25921973-25922302 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr18:33270490-33270811 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 103

Conread position: 3-334
Cow position: chr18:36510199-36510528 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 270, 120

Conread position: 3-334
Cow position: chr18:47743089-47743402 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 237
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 119, 60

Conread position: 5-334
Cow position: chr18:29238476-29238796 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 42

Conread position: 7-334
Cow position: chr18:37507549-37507874 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 28

Conread position: 8-332
Cow position: chr18:51343270-51343592 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 266, 115

Conread position: 23-334
Cow position: chr18:11273255-11272947 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 251, 100

Conread position: 25-209
Cow position: chr18:16089724-16089916 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 153
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 138, 103

Conread position: 25-334
Cow position: chr18:29865006-29864700 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 249, 98

Conread position: 25-334
Cow position: chr18:40482601-40482907 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 249, 98

Conread position: 26-334
Cow position: chr18:27988791-27989097 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 248, 97

Conread position: 31-209
Cow position: chr18:32166313-32166127 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 149
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 129, 92

Conread position: 59-334
Cow position: chr18:52654453-52654723 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 211
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 5, 65

Conread position: 78-334
Cow position: chr18:23660844-23660590 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 195
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 196, 45

Conread position: 78-334
Cow position: chr18:54106755-54107016 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 184
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 197, 45

Conread position: 93-334
Cow position: chr18:54169851-54169612 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 180
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 181, 30

Conread position: 205-334
Cow position: chr18:37584133-37583996 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 106
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 69, 0

Conread position: 1-330
Cow position: chr19:39666960-39666639 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 273, 11

Conread position: 2-209
Cow position: chr19:40886154-40885941 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 160
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 158, 42

Conread position: 3-209
Cow position: chr19:437852-437638 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 168
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 160, 120

Conread position: 3-209
Cow position: chr19:12774691-12774905 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 163
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 160, 120

Conread position: 3-331
Cow position: chr19:206094-206425 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 123

Conread position: 3-332
Cow position: chr19:5899922-5899596 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr19:166541-166214 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr19:892049-891723 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr19:1583839-1584170 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 254
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 155, 120

Conread position: 3-334
Cow position: chr19:2272529-2272204 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr19:16319042-16318713 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 120

Conread position: 3-334
Cow position: chr19:33874998-33875327 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr19:33943154-33943483 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr19:39183958-39183628 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 272, 120

Conread position: 3-334
Cow position: chr19:39392098-39392425 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 9

Conread position: 10-333
Cow position: chr19:28595130-28595452 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 264, 113

Conread position: 14-334
Cow position: chr19:4387200-4387516 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 261, 10

Conread position: 25-209
Cow position: chr19:342856-343050 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 148
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 117, 98

Conread position: 25-331
Cow position: chr19:2586816-2587134 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 218
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 16, 68

Conread position: 25-334
Cow position: chr19:40850855-40850552 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 238, 18

Conread position: 39-331
Cow position: chr19:40471078-40470789 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 204
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 236, 86

Conread position: 56-333
Cow position: chr19:376086-375808 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 207
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 74, 67

Conread position: 59-334
Cow position: chr19:43146301-43146573 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 201
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 5, 65

Conread position: 94-334
Cow position: chr19:32468581-32468819 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 176
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 180, 29

Conread position: 212-334
Cow position: chr19:21339061-21338931 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 106
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 61, 0

Conread position: 2-334
Cow position: chr2:54693972-54694297 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 47

Conread position: 3-101
Cow position: chr2:49628807-49628905 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 82
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 3-209
Cow position: chr2:12362955-12362738 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 175
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 51, 38

Conread position: 3-209
Cow position: chr2:18242874-18242661 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 166
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 151, 125

Conread position: 3-209
Cow position: chr2:19225895-19226100 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 163
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 102, 129

Conread position: 3-209
Cow position: chr2:34563633-34563430 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 160
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 47, 62

Conread position: 3-209
Cow position: chr2:47602235-47602020 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 155
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 85, 126

Conread position: 3-325
Cow position: chr2:10610615-10610295 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-330
Cow position: chr2:574620-574940 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 275, 120

Conread position: 3-332
Cow position: chr2:6005815-6005492 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 237
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 155, 40

Conread position: 3-332
Cow position: chr2:32065009-32064689 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 120

Conread position: 3-333
Cow position: chr2:14209793-14209465 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 120

Conread position: 3-333
Cow position: chr2:16074510-16074182 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-333
Cow position: chr2:45938671-45938346 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 120

Conread position: 3-333
Cow position: chr2:50078598-50078916 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 240
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 271, 40

Conread position: 3-333
Cow position: chr2:56888767-56889095 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr2:246853-246531 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 61

Conread position: 3-334
Cow position: chr2:281654-281327 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 221, 36

Conread position: 3-334
Cow position: chr2:364037-363709 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 37

Conread position: 3-334
Cow position: chr2:9908944-9909282 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 120

Conread position: 3-334
Cow position: chr2:9958043-9957714 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr2:10185198-10184867 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr2:10731832-10731502 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 123

Conread position: 3-334
Cow position: chr2:11558879-11559208 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 120

Conread position: 3-334
Cow position: chr2:12223248-12222919 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 270, 125

Conread position: 3-334
Cow position: chr2:12479236-12478902 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 161

Conread position: 3-334
Cow position: chr2:12696437-12696110 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 22

Conread position: 3-334
Cow position: chr2:13044678-13044349 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 239
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 160, 120

Conread position: 3-334
Cow position: chr2:16901285-16901611 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 242
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 160, 120

Conread position: 3-334
Cow position: chr2:19012394-19012715 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 248
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 271, 79

Conread position: 3-334
Cow position: chr2:24926447-24926773 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 40

Conread position: 3-334
Cow position: chr2:25887519-25887191 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr2:28648580-28648250 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 122

Conread position: 3-334
Cow position: chr2:32458036-32457701 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 89

Conread position: 3-334
Cow position: chr2:34052188-34052521 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 245
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 63, 159

Conread position: 3-334
Cow position: chr2:36981419-36981745 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 120

Conread position: 3-334
Cow position: chr2:41687798-41688126 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr2:42669679-42669343 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 250
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 85, 128

Conread position: 3-334
Cow position: chr2:47037403-47037073 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 120

Conread position: 3-334
Cow position: chr2:52063790-52064118 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 77

Conread position: 3-334
Cow position: chr2:54738518-54738845 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 282, 120

Conread position: 3-334
Cow position: chr2:57336575-57336906 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 121

Conread position: 3-334
Cow position: chr2:62729541-62729869 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 53

Conread position: 3-334
Cow position: chr2:65937196-65936869 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 40

Conread position: 3-334
Cow position: chr2:72688637-72688966 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 238
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 157, 120

Conread position: 3-334
Cow position: chr2:80291733-80291404 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr2:81258207-81258535 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 4-161
Cow position: chr2:16291718-16291873 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 134
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 18, 0

Conread position: 4-278
Cow position: chr2:15575820-15575551 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 217
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 153, 119

Conread position: 4-334
Cow position: chr2:174536-174208 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 119

Conread position: 4-334
Cow position: chr2:32656672-32656993 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 283, 35

Conread position: 5-208
Cow position: chr2:42361236-42361026 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 160
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 158, 38

Conread position: 5-209
Cow position: chr2:43445999-43446204 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 172
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 158, 38

Conread position: 5-334
Cow position: chr2:2087137-2086810 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 268, 118

Conread position: 5-334
Cow position: chr2:4402118-4401792 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 237
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 134, 227

Conread position: 5-334
Cow position: chr2:28639817-28639484 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 72

Conread position: 7-334
Cow position: chr2:8119578-8119901 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 36

Conread position: 7-334
Cow position: chr2:24925602-24925924 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 267, 36

Conread position: 8-334
Cow position: chr2:26922462-26922786 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 266, 115

Conread position: 12-334
Cow position: chr2:6880408-6880717 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 0

Conread position: 19-334
Cow position: chr2:13553613-13553926 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 254, 104

Conread position: 23-331
Cow position: chr2:45966984-45966662 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 226
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 134, 16

Conread position: 25-334
Cow position: chr2:6962563-6962870 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 239, 7

Conread position: 25-334
Cow position: chr2:10264358-10264057 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 249, 92

Conread position: 25-334
Cow position: chr2:11158069-11157762 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 249, 98

Conread position: 25-334
Cow position: chr2:28794290-28794604 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 223
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 80, 105

Conread position: 25-334
Cow position: chr2:47811903-47812208 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 249, 33

Conread position: 25-334
Cow position: chr2:50982096-50981789 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 249, 98

Conread position: 25-334
Cow position: chr2:53330846-53331158 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 98

Conread position: 30-334
Cow position: chr2:33082909-33082610 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 242, 93

Conread position: 34-334
Cow position: chr2:11682208-11682504 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 223
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 86, 145

Conread position: 40-334
Cow position: chr2:5869066-5868775 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 234
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 120, 75

Conread position: 45-334
Cow position: chr2:210970-210698 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 78

Conread position: 46-209
Cow position: chr2:53005175-53005003 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 133
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 5, 78

Conread position: 59-334
Cow position: chr2:975600-975322 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 224
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 104, 64

Conread position: 76-334
Cow position: chr2:49303192-49302937 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 193
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 198, 47

Conread position: 93-334
Cow position: chr2:67188728-67188965 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 183
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 181, 30

Conread position: 106-334
Cow position: chr2:46049104-46048878 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 169
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 168, 17

Conread position: 136-334
Cow position: chr2:10466749-10466943 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 152
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 139, 39

Conread position: 205-334
Cow position: chr2:8085216-8085353 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 106
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 69, 0

Conread position: 207-334
Cow position: chr2:4932963-4932830 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 108
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 67, 0

Conread position: 213-334
Cow position: chr2:9188816-9188687 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 103
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 61, 0

Conread position: 1-278
Cow position: chr20:12041970-12042234 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 0

Conread position: 1-334
Cow position: chr20:25899234-25899565 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 122

Conread position: 2-334
Cow position: chr20:23468119-23467791 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 272, 49

Conread position: 3-209
Cow position: chr20:21717974-21718196 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 169
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 98, 54

Conread position: 3-316
Cow position: chr20:5536492-5536803 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 120

Conread position: 3-333
Cow position: chr20:23800432-23800761 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 18

Conread position: 3-334
Cow position: chr20:824315-824644 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr20:8972629-8972294 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 40

Conread position: 3-334
Cow position: chr20:9547195-9547523 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 92

Conread position: 3-334
Cow position: chr20:10101469-10101145 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 40

Conread position: 3-334
Cow position: chr20:12436872-12436523 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 120

Conread position: 3-334
Cow position: chr20:15096346-15096016 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 247
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 75, 63

Conread position: 3-334
Cow position: chr20:19439464-19439793 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr20:20441403-20441074 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 272, 120

Conread position: 3-334
Cow position: chr20:21916185-21916514 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr20:25849281-25848956 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 272, 120

Conread position: 3-334
Cow position: chr20:26054142-26053814 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 120

Conread position: 3-334
Cow position: chr20:28162373-28162702 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 120

Conread position: 3-334
Cow position: chr20:28564032-28563699 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr20:30429819-30430147 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 121

Conread position: 3-334
Cow position: chr20:35126209-35126533 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 19

Conread position: 4-209
Cow position: chr20:29950074-29950287 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 166
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 159, 119

Conread position: 7-334
Cow position: chr20:17660193-17659866 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 116

Conread position: 8-334
Cow position: chr20:19341380-19341702 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 276, 108

Conread position: 10-333
Cow position: chr20:13787593-13787914 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 221
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 28, 56

Conread position: 20-209
Cow position: chr20:19214544-19214741 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 160
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 140, 103

Conread position: 25-334
Cow position: chr20:13764465-13764773 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 244
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 16, 10

Conread position: 60-334
Cow position: chr20:16178143-16177872 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 198
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 94, 63

Conread position: 171-330
Cow position: chr20:14868665-14868496 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 124
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 36, 0

Conread position: 1-209
Cow position: chr21:2712569-2712770 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 162
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 61, 0

Conread position: 1-209
Cow position: chr21:4588347-4588141 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 163
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 159, 40

Conread position: 1-334
Cow position: chr21:2417867-2418193 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 273, 68

Conread position: 1-334
Cow position: chr21:26849367-26849045 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 246
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 210, 42

Conread position: 1-334
Cow position: chr21:34655487-34655819 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 273, 18

Conread position: 1-334
Cow position: chr21:44764294-44763965 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 57

Conread position: 2-334
Cow position: chr21:40270013-40269682 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 242
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 161, 121

Conread position: 3-209
Cow position: chr21:2880165-2879952 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 165
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 160, 120

Conread position: 3-209
Cow position: chr21:33710809-33711023 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 172
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 153, 120

Conread position: 3-271
Cow position: chr21:10851737-10851995 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 208
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 160, 120

Conread position: 3-327
Cow position: chr21:28257086-28257403 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 13

Conread position: 3-329
Cow position: chr21:7591318-7591640 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 270, 122

Conread position: 3-333
Cow position: chr21:47942609-47942935 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 108

Conread position: 3-334
Cow position: chr21:2512510-2512838 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 41

Conread position: 3-334
Cow position: chr21:5018800-5019131 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr21:6414364-6414035 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr21:26635497-26635168 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr21:27285120-27285436 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 100

Conread position: 3-334
Cow position: chr21:47646991-47647321 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 4-334
Cow position: chr21:13298254-13298576 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 263, 119

Conread position: 5-334
Cow position: chr21:147584-147909 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 269, 37

Conread position: 5-334
Cow position: chr21:4565123-4565449 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 229
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 270, 103

Conread position: 7-334
Cow position: chr21:31514652-31514328 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 268, 116

Conread position: 10-334
Cow position: chr21:30563337-30563653 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 229
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 139, 113

Conread position: 17-271
Cow position: chr21:27150154-27150402 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 205
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 143, 106

Conread position: 20-329
Cow position: chr21:31639590-31639897 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 224
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 252, 108

Conread position: 25-333
Cow position: chr21:27567428-27567763 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 70

Conread position: 25-333
Cow position: chr21:30597788-30597482 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 103

Conread position: 25-334
Cow position: chr21:27069282-27068975 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 98

Conread position: 27-331
Cow position: chr21:29003849-29003534 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 223
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 63, 103

Conread position: 58-334
Cow position: chr21:23804135-23803864 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 198
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 220, 65

Conread position: 60-334
Cow position: chr21:31250710-31250982 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 211
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 169, 63

Conread position: 63-334
Cow position: chr21:1194167-1194425 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 203
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 211, 39

Conread position: 66-334
Cow position: chr21:35143968-35143705 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 200
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 208, 57

Conread position: 88-334
Cow position: chr21:26402012-26401764 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 184
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 183, 35

Conread position: 226-329
Cow position: chr21:4185614-4185721 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 89
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 48, 0

Conread position: 1-209
Cow position: chr22:8736861-8736647 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 122

Conread position: 1-209
Cow position: chr22:46585082-46584866 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 167
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 162, 122

Conread position: 1-332
Cow position: chr22:2563268-2562943 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 122

Conread position: 1-334
Cow position: chr22:29011789-29011460 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 122

Conread position: 1-334
Cow position: chr22:44397916-44398247 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 273, 122

Conread position: 2-334
Cow position: chr22:1323641-1323965 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 38

Conread position: 3-210
Cow position: chr22:23752218-23752005 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 170
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 77, 90

Conread position: 3-260
Cow position: chr22:6333198-6333446 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 201
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 158, 85

Conread position: 3-331
Cow position: chr22:34601082-34601396 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 41

Conread position: 3-332
Cow position: chr22:296935-297263 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 159

Conread position: 3-332
Cow position: chr22:19142197-19141874 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 40

Conread position: 3-334
Cow position: chr22:290210-289880 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 16

Conread position: 3-334
Cow position: chr22:1519541-1519215 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 97

Conread position: 3-334
Cow position: chr22:1880293-1880622 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr22:3803669-3803998 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr22:5313773-5314106 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 124

Conread position: 3-334
Cow position: chr22:11803563-11803237 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 77

Conread position: 3-334
Cow position: chr22:11807252-11806932 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 120

Conread position: 3-334
Cow position: chr22:15852911-15853237 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 278, 120

Conread position: 3-334
Cow position: chr22:20239348-20239021 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 21

Conread position: 3-334
Cow position: chr22:21590911-21591240 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 242
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 158, 120

Conread position: 3-334
Cow position: chr22:30677225-30676896 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 127

Conread position: 3-334
Cow position: chr22:31333560-31333233 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 270, 120

Conread position: 3-334
Cow position: chr22:32283193-32282864 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 120

Conread position: 3-334
Cow position: chr22:34169824-34170152 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr22:35670177-35669853 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 108

Conread position: 3-334
Cow position: chr22:36860059-36859731 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr22:37292189-37291859 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 221, 120

Conread position: 3-334
Cow position: chr22:39468029-39467698 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr22:44367993-44367664 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 127

Conread position: 3-334
Cow position: chr22:44935451-44935779 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr22:46580229-46579898 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 278, 127

Conread position: 5-333
Cow position: chr22:46614794-46615119 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 269, 110

Conread position: 5-334
Cow position: chr22:13766852-13767181 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 21

Conread position: 7-334
Cow position: chr22:559216-558893 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 240
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 156, 116

Conread position: 7-334
Cow position: chr22:42992668-42992988 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 116

Conread position: 8-334
Cow position: chr22:29499034-29499358 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 115

Conread position: 10-209
Cow position: chr22:17326962-17326755 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 160
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 153, 115

Conread position: 25-334
Cow position: chr22:45014856-45015163 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 24

Conread position: 26-329
Cow position: chr22:3272578-3272258 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 225
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 15, 0

Conread position: 29-212
Cow position: chr22:3305087-3304898 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 155
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 134, 27

Conread position: 31-205
Cow position: chr22:8880615-8880796 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 144
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 128, 16

Conread position: 34-209
Cow position: chr22:28783634-28783816 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 145
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 129, 89

Conread position: 36-333
Cow position: chr22:15955506-15955216 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 222
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 238, 87

Conread position: 52-209
Cow position: chr22:29352911-29353076 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 129
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 108, 71

Conread position: 53-334
Cow position: chr22:18605262-18604983 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 221, 70

Conread position: 59-334
Cow position: chr22:48274794-48274527 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 207
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 215, 54

Conread position: 60-334
Cow position: chr22:6501368-6501098 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 212
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 124, 63

Conread position: 63-334
Cow position: chr22:21336503-21336771 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 197
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 97, 60

Conread position: 92-334
Cow position: chr22:18028848-18029087 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 178
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 182, 30

Conread position: 205-334
Cow position: chr22:29853534-29853671 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 107
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 69, 0

Conread position: 208-330
Cow position: chr22:5013751-5013881 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 103
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 66, 0

Conread position: 3-209
Cow position: chr23:23172263-23172475 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 170
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 157, 40

Conread position: 3-333
Cow position: chr23:22145821-22145493 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr23:965010-964689 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr23:1957655-1957974 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr23:2025595-2025267 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 236, 99

Conread position: 3-334
Cow position: chr23:2759383-2759712 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr23:3879601-3879272 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr23:4435137-4435467 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 121

Conread position: 3-334
Cow position: chr23:4639107-4638784 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 98

Conread position: 3-334
Cow position: chr23:5873087-5872758 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 278, 120

Conread position: 3-334
Cow position: chr23:7314395-7314724 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 120

Conread position: 3-334
Cow position: chr23:11714381-11714052 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 120

Conread position: 3-334
Cow position: chr23:14961467-14961138 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 122

Conread position: 3-334
Cow position: chr23:15218403-15218074 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 237
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 160, 125

Conread position: 3-334
Cow position: chr23:15527062-15527394 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 120

Conread position: 3-334
Cow position: chr23:20154742-20154414 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 240
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 160, 120

Conread position: 3-334
Cow position: chr23:28218910-28219248 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 127

Conread position: 3-334
Cow position: chr23:28304400-28304729 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr23:31164287-31164615 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 13

Conread position: 3-334
Cow position: chr23:32351277-32350948 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr23:41141742-41141413 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 5-334
Cow position: chr23:14972469-14972141 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 276, 118

Conread position: 12-334
Cow position: chr23:1400711-1400395 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 231
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 25, 37

Conread position: 18-334
Cow position: chr23:3707901-3708216 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 107

Conread position: 25-334
Cow position: chr23:36029873-36029569 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 98

Conread position: 27-334
Cow position: chr23:19491060-19491364 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 247, 96

Conread position: 43-334
Cow position: chr23:29478737-29479017 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 204
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 111, 85

Conread position: 134-334
Cow position: chr23:1340187-1339988 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 157
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 140, 29

Conread position: 206-334
Cow position: chr23:38579349-38579485 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 112
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 68, 0

Conread position: 2-334
Cow position: chr24:19834980-19835307 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 272, 121

Conread position: 3-193
Cow position: chr24:8606391-8606593 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 155
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 59, 129

Conread position: 3-209
Cow position: chr24:4413972-4413767 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 148
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 147, 0

Conread position: 3-209
Cow position: chr24:6036563-6036777 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 168
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 157, 120

Conread position: 3-209
Cow position: chr24:44019083-44019297 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 120

Conread position: 3-277
Cow position: chr24:6353712-6353973 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 200
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 40, 0

Conread position: 3-331
Cow position: chr24:13044053-13043727 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 120

Conread position: 3-332
Cow position: chr24:12087774-12088101 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 115

Conread position: 3-333
Cow position: chr24:16560739-16560407 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 237
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 120, 46

Conread position: 3-334
Cow position: chr24:147037-146706 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr24:6963176-6962847 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 117

Conread position: 3-334
Cow position: chr24:9090477-9090157 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 19

Conread position: 3-334
Cow position: chr24:13189747-13190067 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 243
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 270, 77

Conread position: 3-334
Cow position: chr24:13233833-13234151 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 248
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 271, 53

Conread position: 3-334
Cow position: chr24:14755573-14755902 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 125

Conread position: 3-334
Cow position: chr24:20286338-20286009 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 125

Conread position: 3-334
Cow position: chr24:23504285-23503956 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 120

Conread position: 3-334
Cow position: chr24:29188861-29189190 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr24:38585560-38585232 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 8-334
Cow position: chr24:7063122-7063443 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 266, 47

Conread position: 10-334
Cow position: chr24:22972646-22972968 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 265, 113

Conread position: 11-331
Cow position: chr24:33934970-33935288 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 263, 105

Conread position: 12-334
Cow position: chr24:13179436-13179120 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 262, 80

Conread position: 12-334
Cow position: chr24:19703071-19703390 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 12

Conread position: 19-333
Cow position: chr24:19469017-19468706 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 227
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 20, 12

Conread position: 37-333
Cow position: chr24:35868976-35868687 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 217
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 237, 91

Conread position: 40-334
Cow position: chr24:40468781-40469077 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 85

Conread position: 41-208
Cow position: chr24:12163844-12164019 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 133
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 124, 82

Conread position: 43-209
Cow position: chr24:6323736-6323562 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 137
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 117, 80

Conread position: 44-334
Cow position: chr24:23094409-23094123 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 224
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 119, 79

Conread position: 45-334
Cow position: chr24:36557945-36557667 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 229, 70

Conread position: 62-333
Cow position: chr24:12107932-12107663 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 205
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 151, 61

Conread position: 100-334
Cow position: chr24:209337-209106 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 175
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 174, 22

Conread position: 104-334
Cow position: chr24:16082825-16082597 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 172
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 170, 19

Conread position: 173-334
Cow position: chr24:5991432-5991260 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 129
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 5, 0

Conread position: 205-334
Cow position: chr24:11151358-11151223 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 70, 0

Conread position: 206-334
Cow position: chr24:6411245-6411381 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 107
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 68, 0

Conread position: 1-334
Cow position: chr25:17655958-17656265 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 232
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 157, 42

Conread position: 2-334
Cow position: chr25:22149077-22149422 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 121

Conread position: 3-209
Cow position: chr25:13062173-13061959 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 120

Conread position: 3-317
Cow position: chr25:26928813-26929124 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 225
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 98, 89

Conread position: 3-334
Cow position: chr25:11041886-11042205 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 59

Conread position: 3-334
Cow position: chr25:12941134-12940807 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 67

Conread position: 3-334
Cow position: chr25:13693131-13692802 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 120

Conread position: 3-334
Cow position: chr25:13782584-13782913 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr25:18305676-18306013 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 34

Conread position: 3-334
Cow position: chr25:18888207-18887878 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 125

Conread position: 3-334
Cow position: chr25:19339062-19338734 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 85

Conread position: 3-334
Cow position: chr25:20346446-20346117 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 120

Conread position: 3-334
Cow position: chr25:20631161-20631489 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 242
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 160, 120

Conread position: 3-334
Cow position: chr25:25508244-25508568 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr25:27021059-27020732 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 120

Conread position: 25-330
Cow position: chr25:27523055-27522768 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 217
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 252, 60

Conread position: 25-334
Cow position: chr25:18178244-18178556 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 100

Conread position: 40-334
Cow position: chr25:34345430-34345139 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 234, 83

Conread position: 73-334
Cow position: chr25:28861214-28861474 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 196
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 201, 50

Conread position: 99-334
Cow position: chr25:13958435-13958673 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 177
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 120, 24

Conread position: 101-333
Cow position: chr25:18192017-18191791 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 171
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 173, 22

Conread position: 200-333
Cow position: chr25:17558442-17558301 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 110
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 74, 0

Conread position: 3-199
Cow position: chr26:35369484-35369688 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 163
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 157, 120

Conread position: 3-200
Cow position: chr26:4603613-4603408 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 162
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 160, 120

Conread position: 3-209
Cow position: chr26:28373681-28373466 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 171
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 160, 120

Conread position: 3-282
Cow position: chr26:8086647-8086916 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 120

Conread position: 3-329
Cow position: chr26:6805518-6805200 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 274, 120

Conread position: 3-332
Cow position: chr26:2350649-2350325 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 274, 49

Conread position: 3-333
Cow position: chr26:3029291-3028963 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 120

Conread position: 3-334
Cow position: chr26:2200176-2200505 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr26:6847899-6847582 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 243
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 271, 84

Conread position: 3-334
Cow position: chr26:8871381-8871710 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr26:12587006-12586677 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 120

Conread position: 3-334
Cow position: chr26:14895494-14895819 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 69

Conread position: 3-334
Cow position: chr26:21825135-21824805 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 114

Conread position: 3-334
Cow position: chr26:30587829-30587495 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 247
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 56, 29

Conread position: 3-334
Cow position: chr26:33148327-33147998 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 120

Conread position: 5-334
Cow position: chr26:34013210-34013534 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 269, 34

Conread position: 8-209
Cow position: chr26:18853765-18853974 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 168
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 152, 115

Conread position: 95-332
Cow position: chr26:27989628-27989400 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 180
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 172, 28

Conread position: 96-334
Cow position: chr26:23888031-23888269 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 182
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 19, 65

Conread position: 122-334
Cow position: chr26:13773227-13773016 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 163
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 152, 55

Conread position: 206-334
Cow position: chr26:17325884-17326020 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 105
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 68, 0

Conread position: 1-209
Cow position: chr27:10327242-10327025 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 171
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 67, 123

Conread position: 1-331
Cow position: chr27:26553943-26553629 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 238
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 159, 61

Conread position: 3-209
Cow position: chr27:29056650-29056864 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 120

Conread position: 3-332
Cow position: chr27:2378018-2378335 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 231
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 174, 40

Conread position: 3-332
Cow position: chr27:8735660-8735987 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 104

Conread position: 3-333
Cow position: chr27:9991723-9991398 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 37

Conread position: 3-334
Cow position: chr27:167438-167109 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 120

Conread position: 3-334
Cow position: chr27:798077-797748 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 120

Conread position: 3-334
Cow position: chr27:1677081-1676754 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 48

Conread position: 3-334
Cow position: chr27:4980862-4981188 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 120

Conread position: 3-334
Cow position: chr27:9331224-9331560 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 236, 120

Conread position: 3-334
Cow position: chr27:12748526-12748856 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr27:26326551-26326880 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr27:27664485-27664811 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 120

Conread position: 10-334
Cow position: chr27:15635845-15635524 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 264, 40

Conread position: 18-334
Cow position: chr27:25803191-25802876 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 234
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 142, 105

Conread position: 25-334
Cow position: chr27:3234010-3233704 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 98

Conread position: 25-334
Cow position: chr27:5912430-5912730 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 77

Conread position: 27-334
Cow position: chr27:1210870-1211175 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 247, 96

Conread position: 39-334
Cow position: chr27:19525071-19525365 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 84

Conread position: 40-334
Cow position: chr27:15035584-15035290 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 83

Conread position: 1-209
Cow position: chr28:25761001-25761212 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 159
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 119, 147

Conread position: 1-333
Cow position: chr28:10471190-10471514 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 242
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 185, 42

Conread position: 1-334
Cow position: chr28:1166362-1166031 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 123

Conread position: 1-334
Cow position: chr28:7059136-7058805 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 122

Conread position: 1-334
Cow position: chr28:21361025-21361355 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 273, 122

Conread position: 1-334
Cow position: chr28:22231756-22231429 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 76

Conread position: 1-334
Cow position: chr28:26424730-26424398 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 123

Conread position: 3-208
Cow position: chr28:15685003-15685213 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 168
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 127, 37

Conread position: 3-209
Cow position: chr28:5766266-5766479 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 169
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 157, 83

Conread position: 3-209
Cow position: chr28:10580340-10580124 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 166
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 112, 122

Conread position: 3-209
Cow position: chr28:13461505-13461716 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 166
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 163, 120

Conread position: 3-275
Cow position: chr28:23023763-23024016 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 204
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 270, 17

Conread position: 3-311
Cow position: chr28:29821525-29821828 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 239
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 160, 40

Conread position: 3-330
Cow position: chr28:24669132-24669456 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 84

Conread position: 3-332
Cow position: chr28:32790858-32790538 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 230
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 157, 13

Conread position: 3-334
Cow position: chr28:484060-483731 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 242
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 153, 120

Conread position: 3-334
Cow position: chr28:784191-784520 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 241
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 160, 120

Conread position: 3-334
Cow position: chr28:1216301-1215976 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 252
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 143, 120

Conread position: 3-334
Cow position: chr28:1459629-1459958 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 120

Conread position: 3-334
Cow position: chr28:1506400-1506729 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr28:1813399-1813077 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 275, 114

Conread position: 3-334
Cow position: chr28:1954889-1955218 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr28:3190718-3190389 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr28:5939022-5939350 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 237
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 160, 120

Conread position: 3-334
Cow position: chr28:6537276-6536940 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr28:6778407-6778078 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr28:7827519-7827841 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 21

Conread position: 3-334
Cow position: chr28:8380571-8380899 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr28:9288484-9288810 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 19

Conread position: 3-334
Cow position: chr28:15034577-15034248 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 221, 120

Conread position: 3-334
Cow position: chr28:17389935-17390266 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr28:18518913-18518584 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr28:22259620-22259294 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr28:24590391-24590719 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr28:33638078-33638401 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr28:34595766-34596094 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 233
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 161, 120

Conread position: 4-334
Cow position: chr28:11504706-11504378 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 168

Conread position: 4-334
Cow position: chr28:14703848-14703521 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 245
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 159, 119

Conread position: 7-209
Cow position: chr28:7741970-7742181 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 159
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 66, 117

Conread position: 7-334
Cow position: chr28:7003534-7003863 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 267, 116

Conread position: 12-333
Cow position: chr28:10495956-10495639 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 242
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 148, 14

Conread position: 17-334
Cow position: chr28:31591107-31591422 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 257, 106

Conread position: 23-282
Cow position: chr28:13721568-13721824 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 180
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 19, 0

Conread position: 26-334
Cow position: chr28:2086022-2086328 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 248, 94

Conread position: 27-334
Cow position: chr28:1772947-1773247 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 217
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 18, 33

Conread position: 42-334
Cow position: chr28:10067489-10067198 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 136

Conread position: 57-334
Cow position: chr28:24884442-24884708 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 205
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 135, 73

Conread position: 62-206
Cow position: chr28:2117587-2117739 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 124
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 98, 61

Conread position: 80-210
Cow position: chr28:7828204-7828333 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 104
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 43, 0

Conread position: 94-334
Cow position: chr28:15998728-15998966 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 180
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 180, 29

Conread position: 134-333
Cow position: chr28:5567815-5568013 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 153
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 140, 26

Conread position: 149-334
Cow position: chr28:3019040-3018844 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 149
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 9, 61

Conread position: 170-334
Cow position: chr28:33253987-33254166 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 134
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 41, 0

Conread position: 205-334
Cow position: chr28:9180602-9180738 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 105
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 69, 0

Conread position: 205-334
Cow position: chr28:17630825-17630962 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 107
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 69, 0

Conread position: 207-334
Cow position: chr28:17665599-17665464 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 108
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 67, 0

Conread position: 1-209
Cow position: chr29:27812587-27812795 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 164
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 95, 52

Conread position: 2-209
Cow position: chr29:43325016-43325228 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 166
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 161, 19

Conread position: 2-332
Cow position: chr29:19655117-19655443 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 272, 121

Conread position: 2-334
Cow position: chr29:2101336-2101665 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 273, 121

Conread position: 2-334
Cow position: chr29:21431355-21431028 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 121

Conread position: 3-209
Cow position: chr29:13583579-13583793 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 166
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 157, 127

Conread position: 3-278
Cow position: chr29:5959073-5959337 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 218
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 160, 120

Conread position: 3-331
Cow position: chr29:13018196-13018514 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 44

Conread position: 3-333
Cow position: chr29:16024061-16024389 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-333
Cow position: chr29:45624890-45625216 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 240
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 271, 74

Conread position: 3-334
Cow position: chr29:46962-46635 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 236
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 160, 74

Conread position: 3-334
Cow position: chr29:609150-608821 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr29:2691661-2691989 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 240
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 160, 32

Conread position: 3-334
Cow position: chr29:2839844-2839514 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 277, 38

Conread position: 3-334
Cow position: chr29:5236519-5236851 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 13

Conread position: 3-334
Cow position: chr29:7429628-7429293 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 131

Conread position: 3-334
Cow position: chr29:7845888-7846217 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 120

Conread position: 3-334
Cow position: chr29:9641287-9640957 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr29:10022834-10022505 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 120

Conread position: 3-334
Cow position: chr29:13622360-13622031 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr29:14210054-14209725 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 125

Conread position: 3-334
Cow position: chr29:16345710-16346027 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 0

Conread position: 3-334
Cow position: chr29:19526788-19526459 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 120

Conread position: 3-334
Cow position: chr29:19621781-19621440 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 127

Conread position: 3-334
Cow position: chr29:25931023-25930692 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 120

Conread position: 3-334
Cow position: chr29:26163335-26163009 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr29:27180255-27179926 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 120

Conread position: 3-334
Cow position: chr29:32287747-32288073 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 61

Conread position: 3-334
Cow position: chr29:32541592-32541922 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 242
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 160, 120

Conread position: 3-334
Cow position: chr29:35298408-35298737 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr29:38207166-38206837 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 122

Conread position: 3-334
Cow position: chr29:39078213-39077885 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 235
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 160, 120

Conread position: 3-334
Cow position: chr29:45206021-45206357 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 82

Conread position: 7-334
Cow position: chr29:2465374-2465049 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 267, 121

Conread position: 7-334
Cow position: chr29:34798309-34797984 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 267, 116

Conread position: 13-266
Cow position: chr29:2746954-2746692 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 110

Conread position: 17-334
Cow position: chr29:13851359-13851051 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 106

Conread position: 25-329
Cow position: chr29:38228498-38228799 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 249, 98

Conread position: 25-334
Cow position: chr29:6264480-6264172 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 98

Conread position: 25-334
Cow position: chr29:8625688-8625368 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 112

Conread position: 25-334
Cow position: chr29:14587439-14587751 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 98

Conread position: 37-330
Cow position: chr29:9082350-9082063 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 216
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 122, 16

Conread position: 39-334
Cow position: chr29:15625187-15624898 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 221
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 236, 66

Conread position: 45-334
Cow position: chr29:409719-409435 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 229, 78

Conread position: 49-334
Cow position: chr29:17406670-17406951 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 215
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 235, 9

Conread position: 52-334
Cow position: chr29:10645863-10645584 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 71

Conread position: 74-334
Cow position: chr29:21422126-21421871 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 203
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 207, 49

Conread position: 1-209
Cow position: chr3:18462427-18462218 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 122

Conread position: 1-334
Cow position: chr3:38494651-38494982 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 249
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 71, 42

Conread position: 2-209
Cow position: chr3:58948942-58949156 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 166
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 161, 121

Conread position: 2-334
Cow position: chr3:3840104-3839775 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 121

Conread position: 2-334
Cow position: chr3:57483313-57482983 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 272, 121

Conread position: 3-158
Cow position: chr3:51938690-51938536 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 126
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 120, 0

Conread position: 3-209
Cow position: chr3:1742745-1742959 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 171
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 157, 120

Conread position: 3-209
Cow position: chr3:5993667-5993460 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 159
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 160, 55

Conread position: 3-209
Cow position: chr3:31416430-31416644 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 173
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 132, 40

Conread position: 3-209
Cow position: chr3:34029507-34029292 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 120

Conread position: 3-209
Cow position: chr3:48229100-48228888 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 164
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 157, 7

Conread position: 3-209
Cow position: chr3:51364375-51364161 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 171
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 152, 120

Conread position: 3-209
Cow position: chr3:72631476-72631684 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 163
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 160, 96

Conread position: 3-325
Cow position: chr3:5952773-5952453 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 270, 120

Conread position: 3-331
Cow position: chr3:30315962-30316288 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 21

Conread position: 3-331
Cow position: chr3:56295599-56295925 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-332
Cow position: chr3:44925476-44925804 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 257, 120

Conread position: 3-333
Cow position: chr3:41209188-41208871 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 241, 120

Conread position: 3-334
Cow position: chr3:595549-595869 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 49

Conread position: 3-334
Cow position: chr3:2709454-2709127 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 237
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 160, 48

Conread position: 3-334
Cow position: chr3:2870202-2870531 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 120

Conread position: 3-334
Cow position: chr3:2918883-2919207 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 243
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 153, 74

Conread position: 3-334
Cow position: chr3:3524425-3524754 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 120

Conread position: 3-334
Cow position: chr3:4287503-4287829 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 49

Conread position: 3-334
Cow position: chr3:6687204-6687536 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 50

Conread position: 3-334
Cow position: chr3:6783782-6784108 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr3:7157306-7156976 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr3:7478501-7478184 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 0

Conread position: 3-334
Cow position: chr3:16224298-16224628 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 121

Conread position: 3-334
Cow position: chr3:18812912-18813242 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr3:19755548-19755221 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 95

Conread position: 3-334
Cow position: chr3:19880059-19880387 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 5

Conread position: 3-334
Cow position: chr3:19945659-19945990 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 120

Conread position: 3-334
Cow position: chr3:23206460-23206133 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 238
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 160, 120

Conread position: 3-334
Cow position: chr3:29575710-29575381 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr3:32621628-32621299 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 75

Conread position: 3-334
Cow position: chr3:34505939-34505610 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 120

Conread position: 3-334
Cow position: chr3:36863044-36862715 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 242
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 157, 120

Conread position: 3-334
Cow position: chr3:40338734-40338405 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 242
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 162, 120

Conread position: 3-334
Cow position: chr3:43191878-43191549 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr3:46503963-46504292 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 115

Conread position: 3-334
Cow position: chr3:46859877-46859551 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 34

Conread position: 3-334
Cow position: chr3:49136152-49135822 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr3:49543797-49543469 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 59

Conread position: 3-334
Cow position: chr3:51857277-51856948 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 120

Conread position: 3-334
Cow position: chr3:53517023-53517352 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr3:56146717-56147044 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 121

Conread position: 3-334
Cow position: chr3:63240831-63240501 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 121

Conread position: 3-334
Cow position: chr3:64026721-64026395 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 94

Conread position: 3-334
Cow position: chr3:66621610-66621938 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 238
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 160, 120

Conread position: 3-334
Cow position: chr3:66889556-66889225 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 241, 120

Conread position: 3-334
Cow position: chr3:68698559-68698232 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 272, 120

Conread position: 3-334
Cow position: chr3:69932420-69932091 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr3:74058940-74059268 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 4-209
Cow position: chr3:32200432-32200644 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 165
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 159, 22

Conread position: 5-210
Cow position: chr3:2854030-2853823 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 164
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 157, 101

Conread position: 5-334
Cow position: chr3:37970462-37970788 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 118

Conread position: 12-334
Cow position: chr3:15054297-15053968 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 196

Conread position: 25-334
Cow position: chr3:21181262-21180955 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 249, 103

Conread position: 25-334
Cow position: chr3:48057925-48057620 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 249, 98

Conread position: 27-334
Cow position: chr3:45975939-45976240 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 225
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 118, 25

Conread position: 27-334
Cow position: chr3:78025983-78025680 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 247, 96

Conread position: 30-334
Cow position: chr3:19940371-19940667 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 93

Conread position: 31-334
Cow position: chr3:4029174-4029474 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 209
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 123, 92

Conread position: 33-334
Cow position: chr3:15188253-15188552 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 241, 90

Conread position: 37-331
Cow position: chr3:74851701-74851409 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 219
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 172, 86

Conread position: 48-334
Cow position: chr3:59863021-59863305 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 226, 80

Conread position: 52-334
Cow position: chr3:58784693-58784413 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 207
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 108, 71

Conread position: 59-330
Cow position: chr3:29580079-29580359 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 64

Conread position: 60-334
Cow position: chr3:10242124-10242396 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 211
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 214, 63

Conread position: 63-334
Cow position: chr3:38868061-38868334 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 60

Conread position: 115-333
Cow position: chr3:72388942-72388711 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 184
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 47, 8

Conread position: 205-334
Cow position: chr3:28669693-28669824 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 100
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 69, 0

Conread position: 205-334
Cow position: chr3:30330537-30330400 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 108
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 69, 0

Conread position: 206-334
Cow position: chr3:39024479-39024615 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 107
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 68, 0

Conread position: 1-192
Cow position: chr4:34178031-34177835 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 161
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 131, 6

Conread position: 1-209
Cow position: chr4:14139590-14139802 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 167
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 145, 122

Conread position: 1-333
Cow position: chr4:14755459-14755130 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 125

Conread position: 1-334
Cow position: chr4:28832932-28833260 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 273, 28

Conread position: 1-334
Cow position: chr4:44780004-44779680 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 273, 114

Conread position: 1-334
Cow position: chr4:49716986-49717323 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 21

Conread position: 2-334
Cow position: chr4:6567595-6567925 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 272, 121

Conread position: 2-334
Cow position: chr4:57985208-57985537 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 272, 121

Conread position: 3-200
Cow position: chr4:12240007-12239802 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 156
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 160, 120

Conread position: 3-209
Cow position: chr4:6489149-6488935 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 167
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 160, 120

Conread position: 3-209
Cow position: chr4:12588545-12588758 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 167
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 160, 120

Conread position: 3-209
Cow position: chr4:17244323-17244537 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 120

Conread position: 3-216
Cow position: chr4:20067510-20067295 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 156
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 181, 120

Conread position: 3-329
Cow position: chr4:14387038-14387363 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 120

Conread position: 3-332
Cow position: chr4:44726795-44727122 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr4:99000-98667 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 120

Conread position: 3-334
Cow position: chr4:357122-357451 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr4:604847-605172 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 120

Conread position: 3-334
Cow position: chr4:827425-827754 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 120

Conread position: 3-334
Cow position: chr4:3356716-3356388 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 117

Conread position: 3-334
Cow position: chr4:5443608-5443279 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 243
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 152, 120

Conread position: 3-334
Cow position: chr4:6865290-6864962 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 272, 59

Conread position: 3-334
Cow position: chr4:10882765-10883083 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 221, 120

Conread position: 3-334
Cow position: chr4:11109854-11109528 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 267, 32

Conread position: 3-334
Cow position: chr4:13494543-13494878 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 237
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 41, 126

Conread position: 3-334
Cow position: chr4:16060496-16060825 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 234, 44

Conread position: 3-334
Cow position: chr4:16639827-16640154 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr4:17502114-17501785 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 120

Conread position: 3-334
Cow position: chr4:17924744-17924415 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr4:25598268-25597940 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr4:26876566-26876242 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 38

Conread position: 3-334
Cow position: chr4:30472430-30472759 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 242
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 157, 120

Conread position: 3-334
Cow position: chr4:33494772-33495102 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 239
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 160, 120

Conread position: 3-334
Cow position: chr4:36897593-36897919 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 241
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 75, 115

Conread position: 3-334
Cow position: chr4:41955980-41956309 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr4:41960117-41960445 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 119

Conread position: 3-334
Cow position: chr4:43318419-43318090 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr4:43882322-43882646 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 253
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 157, 120

Conread position: 4-209
Cow position: chr4:16361139-16361352 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 161
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 159, 119

Conread position: 4-334
Cow position: chr4:3127029-3127356 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 270, 119

Conread position: 4-334
Cow position: chr4:14819681-14819358 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 238
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 86, 62

Conread position: 5-200
Cow position: chr4:9846988-9846785 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 164
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 155, 118

Conread position: 5-334
Cow position: chr4:19005114-19004785 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 124

Conread position: 5-334
Cow position: chr4:32213391-32213718 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 269, 118

Conread position: 7-334
Cow position: chr4:1049042-1048718 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 267, 116

Conread position: 7-334
Cow position: chr4:33071613-33071293 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 75

Conread position: 8-208
Cow position: chr4:41191409-41191202 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 157
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 155, 8

Conread position: 9-334
Cow position: chr4:9355602-9355925 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 114

Conread position: 9-334
Cow position: chr4:46200508-46200194 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 228
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 80, 38

Conread position: 17-334
Cow position: chr4:1929411-1929093 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 257, 106

Conread position: 25-334
Cow position: chr4:27335177-27335485 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 249, 98

Conread position: 25-334
Cow position: chr4:67682436-67682744 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 249, 98

Conread position: 26-334
Cow position: chr4:530658-530964 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 97

Conread position: 26-334
Cow position: chr4:20241759-20242071 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 230
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 246, 97

Conread position: 34-209
Cow position: chr4:46666170-46666351 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 142
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 129, 7

Conread position: 41-334
Cow position: chr4:42405871-42406156 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 232, 7

Conread position: 53-334
Cow position: chr4:60649709-60649994 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 210
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 96, 75

Conread position: 57-334
Cow position: chr4:43867465-43867740 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 200
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 103, 71

Conread position: 60-331
Cow position: chr4:44899551-44899816 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 186
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 188, 65

Conread position: 64-334
Cow position: chr4:34183394-34183132 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 192
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 80, 22

Conread position: 90-334
Cow position: chr4:43898238-43897991 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 191
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 184, 33

Conread position: 123-334
Cow position: chr4:65222424-65222214 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 156
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 151, 46

Conread position: 187-334
Cow position: chr4:9846553-9846398 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 116
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 87, 0

Conread position: 206-334
Cow position: chr4:28175942-28175807 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 108
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 68, 109

Conread position: 1-226
Cow position: chr5:54620362-54620586 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 161
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 103, 91

Conread position: 1-331
Cow position: chr5:50947947-50948294 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 243
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 59, 128

Conread position: 1-334
Cow position: chr5:48533273-48533602 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 231
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 32, 125

Conread position: 2-207
Cow position: chr5:7275153-7275363 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 162
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 138, 121

Conread position: 2-209
Cow position: chr5:57481220-57481005 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 165
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 161, 121

Conread position: 2-333
Cow position: chr5:2915753-2916081 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 274, 121

Conread position: 2-334
Cow position: chr5:31100116-31099790 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 251
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 158, 53

Conread position: 3-208
Cow position: chr5:24295934-24296143 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 156
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 160, 55

Conread position: 3-209
Cow position: chr5:23831000-23830787 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 164
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 160, 114

Conread position: 3-209
Cow position: chr5:24099975-24100183 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 167
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 160, 18

Conread position: 3-209
Cow position: chr5:41376534-41376320 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 120

Conread position: 3-209
Cow position: chr5:57816373-57816159 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 163
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 160, 120

Conread position: 3-333
Cow position: chr5:52435057-52435401 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 245
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 145, 41

Conread position: 3-334
Cow position: chr5:3787257-3787586 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr5:3965769-3966094 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 124

Conread position: 3-334
Cow position: chr5:4070538-4070862 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 281, 18

Conread position: 3-334
Cow position: chr5:4684484-4684156 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 49

Conread position: 3-334
Cow position: chr5:4756863-4756534 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 117

Conread position: 3-334
Cow position: chr5:5104536-5104863 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 23

Conread position: 3-334
Cow position: chr5:6153578-6153248 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 120

Conread position: 3-334
Cow position: chr5:6587268-6586939 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr5:10774943-10774614 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr5:10813430-10813101 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 120

Conread position: 3-334
Cow position: chr5:10842061-10841731 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr5:10855497-10855171 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 100

Conread position: 3-334
Cow position: chr5:10920159-10920484 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 7

Conread position: 3-334
Cow position: chr5:12731395-12731066 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 270, 118

Conread position: 3-334
Cow position: chr5:26077873-26077546 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 254
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 157, 120

Conread position: 3-334
Cow position: chr5:26184181-26184506 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 270, 120

Conread position: 3-334
Cow position: chr5:27197929-27198257 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 127

Conread position: 3-334
Cow position: chr5:31707883-31708210 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr5:37378446-37378775 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr5:37733669-37734001 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr5:40131282-40130953 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 120

Conread position: 3-334
Cow position: chr5:41527478-41527156 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 121

Conread position: 3-334
Cow position: chr5:46665338-46665646 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 240
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 189, 60

Conread position: 3-334
Cow position: chr5:46777713-46778042 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr5:47829758-47829426 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 121

Conread position: 3-334
Cow position: chr5:48807413-48807083 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 120

Conread position: 3-334
Cow position: chr5:49223172-49222841 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 111

Conread position: 3-334
Cow position: chr5:55629307-55629632 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 116

Conread position: 3-334
Cow position: chr5:58197336-58197665 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 281, 120

Conread position: 3-334
Cow position: chr5:59061956-59062285 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 127

Conread position: 3-334
Cow position: chr5:64780694-64780366 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 120

Conread position: 3-334
Cow position: chr5:73487747-73487410 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 120

Conread position: 3-334
Cow position: chr5:76096374-76096700 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 21

Conread position: 4-333
Cow position: chr5:31122266-31121939 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 119

Conread position: 4-334
Cow position: chr5:18121161-18120833 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 270, 119

Conread position: 4-334
Cow position: chr5:24152088-24152428 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 116

Conread position: 5-334
Cow position: chr5:7142743-7142425 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 226
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 106, 135

Conread position: 5-334
Cow position: chr5:32774087-32774414 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 118

Conread position: 5-334
Cow position: chr5:45701631-45701966 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 118

Conread position: 8-209
Cow position: chr5:35301423-35301632 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 167
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 152, 115

Conread position: 8-210
Cow position: chr5:20108226-20108435 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 171
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 152, 115

Conread position: 10-322
Cow position: chr5:34190241-34190559 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 116

Conread position: 10-334
Cow position: chr5:23230311-23230623 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 268, 33

Conread position: 10-334
Cow position: chr5:46004547-46004228 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 263, 38

Conread position: 12-334
Cow position: chr5:51744604-51744914 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 0

Conread position: 17-209
Cow position: chr5:40758253-40758454 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 150
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 141, 0

Conread position: 17-334
Cow position: chr5:50870947-50871256 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 257, 26

Conread position: 25-215
Cow position: chr5:59283658-59283856 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 157
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 138, 98

Conread position: 25-271
Cow position: chr5:34697992-34698229 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 201
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 136, 98

Conread position: 25-334
Cow position: chr5:30361939-30361629 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 216
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 251, 67

Conread position: 25-334
Cow position: chr5:46737252-46736945 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 249, 105

Conread position: 28-334
Cow position: chr5:1228134-1228437 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 219
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 14, 98

Conread position: 38-325
Cow position: chr5:57000897-57001160 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 205
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 13, 81

Conread position: 43-334
Cow position: chr5:54860614-54860340 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 203
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 80, 0

Conread position: 53-209
Cow position: chr5:46646345-46646510 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 131
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 107, 70

Conread position: 60-334
Cow position: chr5:12642058-12641786 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 63

Conread position: 64-334
Cow position: chr5:58191382-58191112 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 208
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 8, 60

Conread position: 80-333
Cow position: chr5:54787739-54787473 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 193
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 83, 45

Conread position: 122-334
Cow position: chr5:49118900-49118689 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 166
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 152, 48

Conread position: 125-334
Cow position: chr5:32952530-32952737 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 160
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 53, 35

Conread position: 205-334
Cow position: chr5:49520223-49520360 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 110
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 27, 15

Conread position: 206-334
Cow position: chr5:41065993-41065857 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 108
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 68, 0

Conread position: 1-208
Cow position: chr6:44262024-44261809 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 167
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 159, 122

Conread position: 1-331
Cow position: chr6:18973005-18972683 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 273, 42

Conread position: 1-334
Cow position: chr6:3888060-3887730 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 267, 101

Conread position: 1-334
Cow position: chr6:24240860-24241191 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 273, 122

Conread position: 1-334
Cow position: chr6:31199299-31199631 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 239
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 104, 42

Conread position: 1-334
Cow position: chr6:59617548-59617867 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 273, 122

Conread position: 1-334
Cow position: chr6:66233258-66233586 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 273, 23

Conread position: 2-334
Cow position: chr6:8759841-8759506 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 126

Conread position: 3-204
Cow position: chr6:25215675-25215884 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 162
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 160, 120

Conread position: 3-209
Cow position: chr6:2376137-2376346 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 165
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 155, 66

Conread position: 3-209
Cow position: chr6:58460860-58460650 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 167
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 157, 13

Conread position: 3-210
Cow position: chr6:57471125-57471340 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 169
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 157, 120

Conread position: 3-270
Cow position: chr6:12627160-12627413 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 196
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 107, 0

Conread position: 3-329
Cow position: chr6:10250150-10249825 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-331
Cow position: chr6:69144025-69144349 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 234
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 62, 37

Conread position: 3-332
Cow position: chr6:28703252-28702925 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 120

Conread position: 3-332
Cow position: chr6:40276540-40276867 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 120

Conread position: 3-332
Cow position: chr6:40865863-40865542 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 253
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 153, 97

Conread position: 3-332
Cow position: chr6:58028184-58028504 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 244
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 271, 79

Conread position: 3-333
Cow position: chr6:38273026-38273353 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 120

Conread position: 3-333
Cow position: chr6:65843073-65843401 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr6:184085-183757 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 120

Conread position: 3-334
Cow position: chr6:330006-329679 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 116

Conread position: 3-334
Cow position: chr6:703669-703998 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr6:1535121-1534795 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 122

Conread position: 3-334
Cow position: chr6:1821169-1820842 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 114

Conread position: 3-334
Cow position: chr6:3150692-3151022 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 118

Conread position: 3-334
Cow position: chr6:7139883-7139554 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 120

Conread position: 3-334
Cow position: chr6:8203647-8203981 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 226, 120

Conread position: 3-334
Cow position: chr6:10645173-10645507 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 243
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 61, 43

Conread position: 3-334
Cow position: chr6:13309921-13309601 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 120

Conread position: 3-334
Cow position: chr6:15139716-15139387 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr6:16591419-16591743 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 270, 79

Conread position: 3-334
Cow position: chr6:17596838-17596509 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr6:21974128-21974454 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 103

Conread position: 3-334
Cow position: chr6:26669404-26669076 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 77

Conread position: 3-334
Cow position: chr6:27375464-27375137 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 277, 32

Conread position: 3-334
Cow position: chr6:28170367-28170694 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 21

Conread position: 3-334
Cow position: chr6:30273436-30273107 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr6:34890665-34890344 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 272, 19

Conread position: 3-334
Cow position: chr6:35875253-35874927 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr6:39910791-39911115 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 244
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 157, 77

Conread position: 3-334
Cow position: chr6:40553123-40552796 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 235
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 161, 120

Conread position: 3-334
Cow position: chr6:43619181-43619510 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr6:51731538-51731864 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr6:52694484-52694812 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 127

Conread position: 5-334
Cow position: chr6:3572054-3572381 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 269, 123

Conread position: 5-334
Cow position: chr6:27528558-27528233 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 232
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 158, 72

Conread position: 7-334
Cow position: chr6:51715994-51716319 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 267, 116

Conread position: 8-334
Cow position: chr6:28187357-28187052 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 240
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 266, 54

Conread position: 10-334
Cow position: chr6:5948317-5947991 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 115

Conread position: 10-334
Cow position: chr6:7177832-7177507 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 236
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 163, 27

Conread position: 11-334
Cow position: chr6:43573794-43574109 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 228
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 72, 26

Conread position: 13-161
Cow position: chr6:47625529-47625676 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 125
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 110, 0

Conread position: 25-329
Cow position: chr6:39333393-39333088 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 98

Conread position: 25-331
Cow position: chr6:18985570-18985862 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 239
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 248, 90

Conread position: 25-334
Cow position: chr6:50124-49819 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 249, 22

Conread position: 25-334
Cow position: chr6:3486944-3486638 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 80

Conread position: 25-334
Cow position: chr6:14390408-14390715 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 98

Conread position: 25-334
Cow position: chr6:41228923-41229230 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 242
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 138, 98

Conread position: 26-209
Cow position: chr6:27473910-27474101 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 146
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 137, 97

Conread position: 26-334
Cow position: chr6:1381859-1381558 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 222
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 249, 97

Conread position: 27-334
Cow position: chr6:26777685-26777383 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 226
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 133, 62

Conread position: 30-334
Cow position: chr6:36528682-36528984 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 244, 93

Conread position: 52-305
Cow position: chr6:3275637-3275375 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 204
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 111, 71

Conread position: 52-333
Cow position: chr6:17047847-17048126 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 76

Conread position: 106-334
Cow position: chr6:28642978-28642752 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 169
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 168, 17

Conread position: 123-333
Cow position: chr6:68028723-68028932 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 156
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 151, 37

Conread position: 123-334
Cow position: chr6:53543673-53543883 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 161
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 151, 37

Conread position: 134-334
Cow position: chr6:62663304-62663503 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 149
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 140, 43

Conread position: 1-195
Cow position: chr7:996286-996486 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 153
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 120, 0

Conread position: 1-209
Cow position: chr7:54581403-54581619 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 171
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 159, 122

Conread position: 1-209
Cow position: chr7:59680393-59680609 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 122

Conread position: 1-209
Cow position: chr7:64351037-64351249 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 170
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 157, 39

Conread position: 1-331
Cow position: chr7:19266370-19266046 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 235
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 274, 25

Conread position: 1-334
Cow position: chr7:21126133-21125801 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 256, 122

Conread position: 1-334
Cow position: chr7:33070867-33070536 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 242
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 73, 123

Conread position: 1-334
Cow position: chr7:63387274-63387610 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 127

Conread position: 2-274
Cow position: chr7:33404849-33404576 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 121

Conread position: 2-332
Cow position: chr7:546386-546711 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 279, 50

Conread position: 2-334
Cow position: chr7:20061034-20061360 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 93

Conread position: 2-334
Cow position: chr7:39097003-39096667 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 129

Conread position: 2-334
Cow position: chr7:58337492-58337170 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 74

Conread position: 3-209
Cow position: chr7:14213828-14213620 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 155
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 156, 30

Conread position: 3-209
Cow position: chr7:33785812-33786026 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 167
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 157, 120

Conread position: 3-210
Cow position: chr7:59685357-59685576 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 168
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 63, 42

Conread position: 3-214
Cow position: chr7:3157016-3157240 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 176
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 63, 123

Conread position: 3-222
Cow position: chr7:29368487-29368265 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 164
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 98, 39

Conread position: 3-330
Cow position: chr7:64239444-64239119 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-331
Cow position: chr7:1609088-1608763 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 105

Conread position: 3-333
Cow position: chr7:27788503-27788831 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 120

Conread position: 3-333
Cow position: chr7:34221297-34220973 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 228
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 275, 120

Conread position: 3-334
Cow position: chr7:444711-444384 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 239
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 160, 120

Conread position: 3-334
Cow position: chr7:6627857-6627529 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 121

Conread position: 3-334
Cow position: chr7:7260069-7260395 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 79

Conread position: 3-334
Cow position: chr7:8336911-8337239 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 120

Conread position: 3-334
Cow position: chr7:10429877-10429548 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr7:11462591-11462262 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr7:13532365-13532031 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 120

Conread position: 3-334
Cow position: chr7:14138046-14137717 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 122

Conread position: 3-334
Cow position: chr7:20773790-20773467 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 19

Conread position: 3-334
Cow position: chr7:20797903-20797576 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 244
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 63, 110

Conread position: 3-334
Cow position: chr7:21312002-21312317 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 238
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 132, 75

Conread position: 3-334
Cow position: chr7:21986951-21987281 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr7:24934011-24933681 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 120

Conread position: 3-334
Cow position: chr7:27100741-27100414 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 270, 118

Conread position: 3-334
Cow position: chr7:33333111-33333439 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 276, 120

Conread position: 3-334
Cow position: chr7:34416800-34416472 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 115

Conread position: 3-334
Cow position: chr7:34487461-34487790 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 272, 120

Conread position: 3-334
Cow position: chr7:38398367-38398694 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 238
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 160, 125

Conread position: 3-334
Cow position: chr7:39793404-39793733 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 122

Conread position: 3-334
Cow position: chr7:45947605-45947275 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr7:46747538-46747867 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr7:48804888-48804559 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr7:52763833-52764162 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 120

Conread position: 3-334
Cow position: chr7:55040938-55040609 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr7:61809556-61809885 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr7:62445604-62445275 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr7:65812370-65812700 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 121

Conread position: 3-334
Cow position: chr7:66070578-66070253 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 243
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 157, 33

Conread position: 3-334
Cow position: chr7:67676619-67676947 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 126

Conread position: 4-334
Cow position: chr7:55536378-55536048 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 270, 119

Conread position: 5-333
Cow position: chr7:42871692-42872019 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 276, 118

Conread position: 5-334
Cow position: chr7:39133026-39133356 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 122

Conread position: 7-334
Cow position: chr7:5308563-5308230 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 248
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 63, 126

Conread position: 25-209
Cow position: chr7:49828765-49828574 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 156
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 137, 98

Conread position: 25-333
Cow position: chr7:14341-14035 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 76

Conread position: 25-334
Cow position: chr7:8143406-8143100 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 249, 19

Conread position: 25-334
Cow position: chr7:21233435-21233133 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 98

Conread position: 25-334
Cow position: chr7:51015820-51016118 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 225
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 249, 27

Conread position: 25-334
Cow position: chr7:60728884-60728580 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 249, 96

Conread position: 25-334
Cow position: chr7:61579071-61579377 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 249, 98

Conread position: 39-334
Cow position: chr7:526530-526823 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 218
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 235, 84

Conread position: 45-170
Cow position: chr7:40178977-40179102 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 102
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 71, 79

Conread position: 45-334
Cow position: chr7:27711021-27711304 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 229, 78

Conread position: 52-209
Cow position: chr7:40201550-40201714 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 131
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 108, 5

Conread position: 56-334
Cow position: chr7:949141-949421 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 225
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 11, 69

Conread position: 56-334
Cow position: chr7:33067126-33066850 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 210
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 18, 48

Conread position: 57-332
Cow position: chr7:3121599-3121871 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 66

Conread position: 70-334
Cow position: chr7:34150555-34150816 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 193
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 204, 58

Conread position: 88-334
Cow position: chr7:37010336-37010092 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 187
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 186, 35

Conread position: 92-333
Cow position: chr7:64247952-64247714 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 182
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 182, 31

Conread position: 92-334
Cow position: chr7:40320903-40321140 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 185
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 92, 31

Conread position: 105-334
Cow position: chr7:27459082-27458853 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 171
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 30, 67

Conread position: 205-334
Cow position: chr7:112348-112485 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 109
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 69, 0

Conread position: 211-334
Cow position: chr7:996670-996797 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 102
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 63, 117

Conread position: 1-209
Cow position: chr8:48103576-48103790 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 169
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 164, 77

Conread position: 1-271
Cow position: chr8:1121110-1121369 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 0

Conread position: 1-279
Cow position: chr8:45145575-45145305 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 125

Conread position: 1-334
Cow position: chr8:44700714-44701045 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 89

Conread position: 1-334
Cow position: chr8:47887576-47887907 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 273, 122

Conread position: 2-334
Cow position: chr8:8400358-8400039 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 243
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 63, 47

Conread position: 2-334
Cow position: chr8:23772373-23772696 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 272, 90

Conread position: 2-334
Cow position: chr8:50995520-50995850 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 272, 121

Conread position: 3-209
Cow position: chr8:2386923-2387137 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 169
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 162, 120

Conread position: 3-209
Cow position: chr8:29008353-29008566 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 29

Conread position: 3-209
Cow position: chr8:33590117-33590331 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 169
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 160, 120

Conread position: 3-209
Cow position: chr8:37932830-37933044 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 172
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 157, 120

Conread position: 3-209
Cow position: chr8:56884261-56884475 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 32

Conread position: 3-278
Cow position: chr8:39194479-39194214 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 120

Conread position: 3-325
Cow position: chr8:2887487-2887806 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 28

Conread position: 3-331
Cow position: chr8:18054460-18054788 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 232
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 160, 44

Conread position: 3-333
Cow position: chr8:11763678-11764013 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 237
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 159, 100

Conread position: 3-333
Cow position: chr8:38392361-38392686 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-333
Cow position: chr8:47075891-47076226 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 252
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 59, 18

Conread position: 3-334
Cow position: chr8:1320751-1321080 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr8:1347516-1347187 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr8:3748466-3748138 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr8:3786364-3786693 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr8:3855290-3854961 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr8:4688135-4688464 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 245, 120

Conread position: 3-334
Cow position: chr8:10750085-10750410 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr8:11824630-11824955 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 121

Conread position: 3-334
Cow position: chr8:11834260-11834589 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 122

Conread position: 3-334
Cow position: chr8:12804517-12804828 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 274, 47

Conread position: 3-334
Cow position: chr8:14927150-14926822 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 120

Conread position: 3-334
Cow position: chr8:16090577-16090896 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 226
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 270, 34

Conread position: 3-334
Cow position: chr8:21250960-21251289 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 117

Conread position: 3-334
Cow position: chr8:22570570-22570241 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr8:25524126-25524455 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr8:30155836-30156162 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 243
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 157, 49

Conread position: 3-334
Cow position: chr8:32317814-32317491 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 243
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 124, 148

Conread position: 3-334
Cow position: chr8:32630299-32629970 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr8:34349405-34349734 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr8:36634775-36634441 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 201

Conread position: 3-334
Cow position: chr8:37655821-37655492 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 122

Conread position: 3-334
Cow position: chr8:39820186-39820515 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 120

Conread position: 3-334
Cow position: chr8:42485645-42485971 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr8:45794017-45793693 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 96

Conread position: 3-334
Cow position: chr8:47068082-47067757 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr8:47660587-47660258 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr8:49218458-49218805 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 248
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 64, 136

Conread position: 3-334
Cow position: chr8:50929371-50929042 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr8:51068263-51067934 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 120

Conread position: 3-334
Cow position: chr8:60062144-60062472 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 7-334
Cow position: chr8:12450782-12451104 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 267, 36

Conread position: 7-334
Cow position: chr8:19332311-19332634 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 267, 121

Conread position: 10-334
Cow position: chr8:47947827-47948150 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 228
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 213, 113

Conread position: 11-334
Cow position: chr8:21584931-21585244 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 235
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 264, 112

Conread position: 14-334
Cow position: chr8:29923606-29923288 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 52

Conread position: 15-334
Cow position: chr8:50432380-50432091 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 233
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 48, 0

Conread position: 19-334
Cow position: chr8:11803564-11803874 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 255, 70

Conread position: 25-334
Cow position: chr8:14590122-14589814 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 249, 98

Conread position: 25-334
Cow position: chr8:35471058-35471365 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 249, 98

Conread position: 25-334
Cow position: chr8:59261188-59260885 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 232
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 249, 54

Conread position: 27-334
Cow position: chr8:8904313-8904009 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 215
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 247, 25

Conread position: 30-334
Cow position: chr8:24190727-24191029 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 220
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 130, 93

Conread position: 33-334
Cow position: chr8:9944156-9943863 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 218
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 115, 90

Conread position: 47-334
Cow position: chr8:25774870-25774584 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 218
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 234, 76

Conread position: 63-334
Cow position: chr8:44241897-44241628 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 60

Conread position: 69-334
Cow position: chr8:45158726-45158463 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 195
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 205, 46

Conread position: 69-334
Cow position: chr8:58184815-58184555 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 197
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 27, 42

Conread position: 114-334
Cow position: chr8:46060127-46059909 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 163
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 160, 9

Conread position: 136-334
Cow position: chr8:42428638-42428441 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 148
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 138, 33

Conread position: 162-334
Cow position: chr8:29033091-29032911 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 133
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 47, 20

Conread position: 170-334
Cow position: chr8:21205434-21205602 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 131
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 104, 17

Conread position: 205-334
Cow position: chr8:53902722-53902859 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 106
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 69, 0

Conread position: 206-330
Cow position: chr8:5661911-5661784 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 104
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 68, 0

Conread position: 207-334
Cow position: chr8:46948523-46948388 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 108
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 67, 0

Conread position: 1-209
Cow position: chr9:827723-827508 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 170
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 158, 21

Conread position: 1-278
Cow position: chr9:28000903-28001175 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 220
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 65, 128

Conread position: 1-334
Cow position: chr9:18508441-18508113 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 273, 122

Conread position: 3-198
Cow position: chr9:32970330-32970532 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 163
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 160, 105

Conread position: 3-199
Cow position: chr9:44384650-44384854 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 120

Conread position: 3-209
Cow position: chr9:4533881-4534095 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 167
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 160, 70

Conread position: 3-209
Cow position: chr9:10976502-10976716 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 171
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 157, 120

Conread position: 3-209
Cow position: chr9:20939698-20939911 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 120

Conread position: 3-209
Cow position: chr9:26567990-26568196 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 163
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 147, 28

Conread position: 3-209
Cow position: chr9:27935767-27935981 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 170
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 157, 120

Conread position: 3-209
Cow position: chr9:30300842-30300628 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 167
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 157, 120

Conread position: 3-209
Cow position: chr9:50093850-50093636 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 120

Conread position: 3-330
Cow position: chr9:2871720-2872044 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-331
Cow position: chr9:27036289-27036613 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 32

Conread position: 3-331
Cow position: chr9:28023187-28023512 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 270, 120

Conread position: 3-331
Cow position: chr9:59537487-59537814 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 122

Conread position: 3-333
Cow position: chr9:650640-650310 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 11

Conread position: 3-333
Cow position: chr9:2679654-2679987 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 77

Conread position: 3-334
Cow position: chr9:779432-779106 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 40

Conread position: 3-334
Cow position: chr9:1250610-1250282 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 45

Conread position: 3-334
Cow position: chr9:2172327-2172655 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 182

Conread position: 3-334
Cow position: chr9:4307975-4307654 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 230
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 272, 63

Conread position: 3-334
Cow position: chr9:8781522-8781212 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 243
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 271, 53

Conread position: 3-334
Cow position: chr9:9014460-9014786 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 255
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 160, 40

Conread position: 3-334
Cow position: chr9:13474388-13474065 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 119

Conread position: 3-334
Cow position: chr9:17304588-17304260 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 92

Conread position: 3-334
Cow position: chr9:19158146-19157813 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 221, 120

Conread position: 3-334
Cow position: chr9:21410694-21411021 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 40

Conread position: 3-334
Cow position: chr9:25903911-25904237 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 74

Conread position: 3-334
Cow position: chr9:26101883-26101554 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 44

Conread position: 3-334
Cow position: chr9:26737297-26737637 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 100

Conread position: 3-334
Cow position: chr9:27783572-27783901 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 272, 120

Conread position: 3-334
Cow position: chr9:30673766-30674093 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr9:30828128-30828456 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 283, 120

Conread position: 3-334
Cow position: chr9:31066105-31066434 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr9:31808962-31809292 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr9:37161427-37161101 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr9:37969822-37969510 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 0

Conread position: 3-334
Cow position: chr9:38677531-38677860 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr9:42311065-42311407 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 120

Conread position: 3-334
Cow position: chr9:47043347-47043676 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 120

Conread position: 3-334
Cow position: chr9:50792100-50792431 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 245
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 54, 122

Conread position: 3-334
Cow position: chr9:51180792-51180464 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 58

Conread position: 4-333
Cow position: chr9:2212528-2212854 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 270, 119

Conread position: 7-334
Cow position: chr9:7004122-7004449 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 118

Conread position: 8-334
Cow position: chr9:1074784-1074459 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 115

Conread position: 10-334
Cow position: chr9:46041853-46041536 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 264, 27

Conread position: 20-334
Cow position: chr9:5142101-5142410 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 226
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 100, 86

Conread position: 25-195
Cow position: chr9:54681337-54681160 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 139
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 135, 47

Conread position: 25-332
Cow position: chr9:1994998-1994693 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 249, 98

Conread position: 25-334
Cow position: chr9:5005394-5005702 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 249, 98

Conread position: 25-334
Cow position: chr9:22436362-22436665 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 223
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 136, 98

Conread position: 36-334
Cow position: chr9:56303032-56302736 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 238, 87

Conread position: 42-334
Cow position: chr9:9647568-9647857 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 206
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 233, 81

Conread position: 44-334
Cow position: chr9:6250711-6251000 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 80

Conread position: 48-334
Cow position: chr9:6709390-6709674 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 211
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 112, 75

Conread position: 53-334
Cow position: chr9:29026486-29026209 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 221, 70

Conread position: 56-209
Cow position: chr9:3804793-3804950 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 129
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 106, 67

Conread position: 60-331
Cow position: chr9:20176281-20176000 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 194
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 96, 65

Conread position: 60-333
Cow position: chr9:43665110-43665377 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 200
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 8, 64

Conread position: 71-334
Cow position: chr9:47004186-47004447 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 203
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 203, 52

Conread position: 82-334
Cow position: chr9:17312845-17313090 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 194
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 192, 41

Conread position: 114-334
Cow position: chr9:31090675-31090894 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 171
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 109, 9

Conread position: 115-329
Cow position: chr9:34769642-34769855 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 165
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 159, 8

Conread position: 128-334
Cow position: chr9:16177102-16177303 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 158
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 146, 32

Conread position: 203-334
Cow position: chr9:32970642-32970775 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 108
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 71, 0

Conread position: 206-334
Cow position: chr9:31112705-31112841 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 110
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 68, 0

Conread position: 209-334
Cow position: chr9:1982408-1982541 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 107
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 73, 64

Conread position: 1-207
Cow position: chrX:29792742-29792528 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 159
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 6, 39

Conread position: 1-333
Cow position: chrX:27496003-27496335 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 273, 34

Conread position: 1-333
Cow position: chrX:41849920-41849602 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 39

Conread position: 1-334
Cow position: chrX:12184232-12184563 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 272, 124

Conread position: 1-334
Cow position: chrX:13075407-13075080 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 273, 60

Conread position: 1-334
Cow position: chrX:18535704-18536022 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 240
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 134, 56

Conread position: 1-334
Cow position: chrX:21753146-21752819 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 273, 57

Conread position: 2-332
Cow position: chrX:13411841-13411509 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 242
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 45, 127

Conread position: 2-332
Cow position: chrX:26765904-26765577 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 272, 121

Conread position: 2-333
Cow position: chrX:3419918-3419597 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 276, 128

Conread position: 3-200
Cow position: chrX:32327458-32327661 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 161
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 127, 94

Conread position: 3-201
Cow position: chrX:12314468-12314265 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 161
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 159, 34

Conread position: 3-209
Cow position: chrX:1548273-1548488 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 166
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 108, 121

Conread position: 3-209
Cow position: chrX:15125936-15125722 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 169
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 160, 120

Conread position: 3-209
Cow position: chrX:15600439-15600653 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 163
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 160, 120

Conread position: 3-209
Cow position: chrX:16811151-16810939 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 169
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 157, 85

Conread position: 3-209
Cow position: chrX:18452275-18452489 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 120

Conread position: 3-209
Cow position: chrX:26529258-26529472 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 167
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 160, 120

Conread position: 3-209
Cow position: chrX:27592692-27592482 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 162
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 157, 97

Conread position: 3-209
Cow position: chrX:29949306-29949103 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 161
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 160, 37

Conread position: 3-211
Cow position: chrX:2977798-2977583 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 120

Conread position: 3-271
Cow position: chrX:29097490-29097767 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 120

Conread position: 3-329
Cow position: chrX:21830806-21831131 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 233
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 160, 120

Conread position: 3-331
Cow position: chrX:5393553-5393227 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-331
Cow position: chrX:10414847-10414516 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 230
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 36, 105

Conread position: 3-332
Cow position: chrX:321759-322085 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 251
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 160, 120

Conread position: 3-332
Cow position: chrX:17052839-17053172 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 120

Conread position: 3-333
Cow position: chrX:673911-673585 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 22

Conread position: 3-333
Cow position: chrX:28505975-28505647 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 120

Conread position: 3-333
Cow position: chrX:30182634-30182305 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-333
Cow position: chrX:36136270-36135952 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 281, 120

Conread position: 3-333
Cow position: chrX:42477521-42477194 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 120

Conread position: 3-334
Cow position: chrX:972062-972401 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 126

Conread position: 3-334
Cow position: chrX:2481336-2481010 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 273, 40

Conread position: 3-334
Cow position: chrX:2561564-2561233 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 13

Conread position: 3-334
Cow position: chrX:2577718-2578045 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 119

Conread position: 3-334
Cow position: chrX:3374615-3374286 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 242
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 157, 120

Conread position: 3-334
Cow position: chrX:3467350-3467024 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 32

Conread position: 3-334
Cow position: chrX:6281489-6281160 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chrX:6871781-6871452 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 120

Conread position: 3-334
Cow position: chrX:7094762-7095091 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chrX:7753202-7753522 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 245
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 271, 43

Conread position: 3-334
Cow position: chrX:9093937-9094266 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 125

Conread position: 3-334
Cow position: chrX:11148040-11147710 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 127

Conread position: 3-334
Cow position: chrX:11423165-11423494 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 241
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 157, 120

Conread position: 3-334
Cow position: chrX:11463753-11463424 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 242
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 157, 120

Conread position: 3-334
Cow position: chrX:12481291-12481619 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chrX:12653212-12652882 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chrX:12836024-12835706 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 0

Conread position: 3-334
Cow position: chrX:13095966-13095641 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 58

Conread position: 3-334
Cow position: chrX:13447532-13447203 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 120

Conread position: 3-334
Cow position: chrX:14596141-14596467 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chrX:15623210-15622881 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chrX:15979663-15979336 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chrX:16361826-16361497 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chrX:16700989-16701314 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 18

Conread position: 3-334
Cow position: chrX:16780577-16780905 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 13

Conread position: 3-334
Cow position: chrX:17477128-17476797 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 19

Conread position: 3-334
Cow position: chrX:18658514-18658185 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chrX:18952384-18952054 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chrX:20035106-20034778 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 119

Conread position: 3-334
Cow position: chrX:21491453-21491783 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chrX:21580779-21581109 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chrX:22489450-22489779 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 237
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 160, 120

Conread position: 3-334
Cow position: chrX:23278317-23278646 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chrX:23454725-23454396 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chrX:24324271-24323942 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 127

Conread position: 3-334
Cow position: chrX:24771568-24771239 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chrX:27084262-27084596 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 124

Conread position: 3-334
Cow position: chrX:27316572-27316901 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chrX:27425028-27424699 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chrX:28521311-28520982 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 128

Conread position: 3-334
Cow position: chrX:28560596-28560266 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 128

Conread position: 3-334
Cow position: chrX:28586275-28586604 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 127

Conread position: 3-334
Cow position: chrX:28664689-28665018 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 120

Conread position: 3-334
Cow position: chrX:29096032-29095703 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 272, 120

Conread position: 3-334
Cow position: chrX:29172472-29172144 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chrX:29910133-29909802 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chrX:30012293-30012622 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 120

Conread position: 3-334
Cow position: chrX:30201443-30201114 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 120

Conread position: 3-334
Cow position: chrX:30436138-30436467 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 120

Conread position: 3-334
Cow position: chrX:31199852-31200179 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 244
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 273, 40

Conread position: 3-334
Cow position: chrX:32065874-32065546 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chrX:35531149-35531478 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chrX:37813446-37813769 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 34

Conread position: 3-334
Cow position: chrX:37957761-37957432 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 120

Conread position: 3-334
Cow position: chrX:39562658-39562329 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 4-333
Cow position: chrX:5296262-5295930 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 59

Conread position: 5-319
Cow position: chrX:37850427-37850739 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 269, 118

Conread position: 5-334
Cow position: chrX:23020591-23020918 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 118

Conread position: 5-334
Cow position: chrX:26398830-26398503 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 118

Conread position: 5-334
Cow position: chrX:29886282-29886611 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 247
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 47, 27

Conread position: 10-209
Cow position: chrX:5282479-5282276 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 164
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 148, 40

Conread position: 14-334
Cow position: chrX:45418942-45418625 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 259, 70

Conread position: 25-196
Cow position: chrX:5367834-5367655 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 147
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 135, 98

Conread position: 25-210
Cow position: chrX:2534760-2534575 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 155
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 135, 9

Conread position: 25-334
Cow position: chrX:21224788-21225094 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 228
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 138, 98

Conread position: 25-334
Cow position: chrX:27986515-27986207 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 248, 105

Conread position: 25-334
Cow position: chrX:30230784-30230488 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 227
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 242, 20

Conread position: 26-278
Cow position: chrX:47385300-47385060 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 186
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 59, 98

Conread position: 30-334
Cow position: chrX:21791935-21792237 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 93

Conread position: 37-210
Cow position: chrX:30068513-30068333 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 145
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 121, 5

Conread position: 37-334
Cow position: chrX:12463103-12463398 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 219
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 238, 86

Conread position: 40-334
Cow position: chrX:11459508-11459215 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 233, 83

Conread position: 41-331
Cow position: chrX:41887663-41887367 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 214
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 109, 84

Conread position: 48-333
Cow position: chrX:45376654-45376363 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 215
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 125, 80

Conread position: 50-334
Cow position: chrX:30365461-30365179 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 219
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 12, 6

Conread position: 52-334
Cow position: chrX:20724314-20724589 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 207
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 222, 23

Conread position: 53-332
Cow position: chrX:23389191-23388915 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 205
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 81, 43

Conread position: 56-334
Cow position: chrX:10530442-10530167 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 201
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 99, 67

Conread position: 80-331
Cow position: chrX:27962200-27962450 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 191
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 194, 43

Conread position: 84-334
Cow position: chrX:29852344-29852095 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 187
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 190, 39

Conread position: 95-334
Cow position: chrX:21507782-21507545 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 180
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 179, 28

Conread position: 115-334
Cow position: chrX:37759782-37760007 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 157
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 56, 81

Conread position: 134-334
Cow position: chrX:16709389-16709595 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 151
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 64, 41

Conread position: 205-334
Cow position: chrX:7031939-7032076 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 106
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 69, 0

Conread position: 207-334
Cow position: chrX:21590793-21590925 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 106
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 67, 106