Cow genome map

Conread name: rsin05_m18.y1

Conread position: 1-276
Cow position: chr1:53310867-53310594 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 49

Conread position: 1-310
Cow position: chr1:49971524-49971839 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 147

Conread position: 1-311
Cow position: chr1:3932615-3932942 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-311
Cow position: chr1:5300458-5300778 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-311
Cow position: chr1:5504568-5504248 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-311
Cow position: chr1:17010063-17010382 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 0

Conread position: 1-311
Cow position: chr1:18963100-18963417 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 33

Conread position: 1-311
Cow position: chr1:20831481-20831168 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 196

Conread position: 1-311
Cow position: chr1:25054914-25054597 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 0

Conread position: 1-311
Cow position: chr1:26515747-26516061 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 254, 100

Conread position: 1-311
Cow position: chr1:26812443-26812756 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 170

Conread position: 1-311
Cow position: chr1:27955818-27956123 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 238
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 212, 108

Conread position: 1-311
Cow position: chr1:28713670-28713351 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 31

Conread position: 1-311
Cow position: chr1:29036944-29036630 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 47

Conread position: 1-311
Cow position: chr1:30532392-30532705 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 13

Conread position: 1-311
Cow position: chr1:31239598-31239918 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 199

Conread position: 1-311
Cow position: chr1:31363470-31363785 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 254, 117

Conread position: 1-311
Cow position: chr1:38477944-38477623 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 0

Conread position: 1-311
Cow position: chr1:41518194-41518502 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 83

Conread position: 1-311
Cow position: chr1:52356619-52356939 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-311
Cow position: chr1:53422528-53422202 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 24

Conread position: 1-311
Cow position: chr1:55779212-55778892 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-311
Cow position: chr1:56141726-56142040 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 276, 251

Conread position: 1-311
Cow position: chr1:56620867-56620547 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-311
Cow position: chr1:57363701-57364024 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 142

Conread position: 1-311
Cow position: chr1:57570466-57570146 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 169

Conread position: 1-311
Cow position: chr1:58339558-58339241 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 0

Conread position: 1-311
Cow position: chr1:69025351-69025671 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-311
Cow position: chr1:72184235-72184555 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-311
Cow position: chr1:72986088-72985772 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 211

Conread position: 1-311
Cow position: chr1:73064707-73065027 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-311
Cow position: chr1:73439563-73439883 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 0

Conread position: 1-311
Cow position: chr1:76618842-76619159 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 0

Conread position: 1-311
Cow position: chr1:76877661-76877342 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 34

Conread position: 1-311
Cow position: chr1:77747373-77747054 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-311
Cow position: chr1:79454339-79454658 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 143

Conread position: 1-311
Cow position: chr1:81779083-81778767 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 33

Conread position: 1-311
Cow position: chr1:82910203-82910510 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 254, 47

Conread position: 1-311
Cow position: chr1:85794600-85794279 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 0

Conread position: 1-311
Cow position: chr1:89111248-89110928 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 34

Conread position: 1-311
Cow position: chr1:89493597-89493907 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 246, 33

Conread position: 1-311
Cow position: chr1:91672251-91672571 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-311
Cow position: chr1:93857149-93856831 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 0

Conread position: 1-311
Cow position: chr1:100509377-100509059 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 47

Conread position: 1-311
Cow position: chr1:100708699-100708385 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 74

Conread position: 1-311
Cow position: chr1:101833032-101832725 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 250, 46

Conread position: 1-312
Cow position: chr1:44086886-44087205 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-312
Cow position: chr1:61343085-61343397 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 45

Conread position: 1-383
Cow position: chr1:44973930-44973545 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 16

Conread position: 1-384
Cow position: chr1:63603157-63603556 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 0

Conread position: 1-384
Cow position: chr1:86507000-86507401 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 22

Conread position: 1-384
Cow position: chr1:89483756-89483360 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 276, 56

Conread position: 2-308
Cow position: chr1:27113880-27114189 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 167

Conread position: 2-309
Cow position: chr1:88394023-88394330 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 226
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 9, 16

Conread position: 2-310
Cow position: chr1:40533408-40533718 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 69

Conread position: 2-311
Cow position: chr1:6197666-6197985 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 0

Conread position: 2-311
Cow position: chr1:8827691-8827373 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 114

Conread position: 2-311
Cow position: chr1:13251889-13252208 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 0

Conread position: 2-311
Cow position: chr1:17939127-17939444 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 0

Conread position: 2-311
Cow position: chr1:30075502-30075190 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 249, 74

Conread position: 2-311
Cow position: chr1:32565301-32565611 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 252, 135

Conread position: 2-311
Cow position: chr1:36540128-36539822 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 162

Conread position: 2-311
Cow position: chr1:57525702-57525383 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 211

Conread position: 2-311
Cow position: chr1:62803241-62803563 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 51

Conread position: 2-311
Cow position: chr1:65388910-65388593 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 168

Conread position: 2-311
Cow position: chr1:66487861-66487538 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 2-311
Cow position: chr1:72086133-72085815 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 33

Conread position: 2-311
Cow position: chr1:94662305-94661988 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 60

Conread position: 2-311
Cow position: chr1:102432394-102432713 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 0

Conread position: 2-384
Cow position: chr1:23657801-23657391 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 0

Conread position: 3-309
Cow position: chr1:99017436-99017746 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 117

Conread position: 3-311
Cow position: chr1:9525720-9526038 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 207

Conread position: 3-311
Cow position: chr1:48249529-48249214 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 252, 0

Conread position: 3-311
Cow position: chr1:73434699-73435015 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 0

Conread position: 3-311
Cow position: chr1:74284046-74284363 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 0

Conread position: 3-311
Cow position: chr1:88133406-88133088 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 0

Conread position: 3-311
Cow position: chr1:98095001-98094686 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 47

Conread position: 11-299
Cow position: chr1:19484375-19484664 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 210
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 26, 34

Conread position: 12-311
Cow position: chr1:82566718-82566409 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 0

Conread position: 13-309
Cow position: chr1:56725780-56725474 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 13-311
Cow position: chr1:21090065-21089757 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 13-311
Cow position: chr1:59484248-59484546 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 35

Conread position: 13-311
Cow position: chr1:67000296-67000604 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 13-311
Cow position: chr1:71560127-71560432 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 241, 0

Conread position: 14-311
Cow position: chr1:86545522-86545826 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 240, 0

Conread position: 23-311
Cow position: chr1:85777843-85778140 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 93

Conread position: 28-311
Cow position: chr1:89124978-89124685 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 0

Conread position: 30-311
Cow position: chr1:76094258-76094550 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 0

Conread position: 36-309
Cow position: chr1:57970984-57971259 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 211
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 35, 12

Conread position: 39-277
Cow position: chr1:53396116-53395863 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 193
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 83, 77

Conread position: 53-308
Cow position: chr1:79113040-79112766 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 205
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 92, 0

Conread position: 54-308
Cow position: chr1:19183730-19183990 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 120

Conread position: 58-277
Cow position: chr1:56631216-56630992 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 172
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 98, 102

Conread position: 65-311
Cow position: chr1:42738995-42738746 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 177

Conread position: 70-311
Cow position: chr1:4210663-4210427 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 66

Conread position: 70-384
Cow position: chr1:30494501-30494171 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 10

Conread position: 73-276
Cow position: chr1:89767968-89768176 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 0

Conread position: 106-311
Cow position: chr1:47160867-47161088 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 164
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 45, 0

Conread position: 111-311
Cow position: chr1:69405535-69405325 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 0

Conread position: 116-308
Cow position: chr1:72138566-72138366 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 148
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 103, 0

Conread position: 121-311
Cow position: chr1:73019433-73019634 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 156
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 98, 28

Conread position: 144-311
Cow position: chr1:62922046-62921874 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 141
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 75, 110

Conread position: 146-311
Cow position: chr1:16117428-16117249 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 142
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 73, 0

Conread position: 156-311
Cow position: chr1:92281132-92281293 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 128
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 63, 89

Conread position: 158-295
Cow position: chr1:92554623-92554767 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 120
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 62, 0

Conread position: 174-311
Cow position: chr1:33549227-33549371 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 123
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 80, 0

Conread position: 174-311
Cow position: chr1:81289597-81289453 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 126
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 77, 0

Conread position: 174-311
Cow position: chr1:100593762-100593909 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 125
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 45, 0

Conread position: 177-311
Cow position: chr1:82862972-82862827 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 118
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 9, 0

Conread position: 190-311
Cow position: chr1:21306779-21306648 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 112
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 29, 0

Conread position: 1-276
Cow position: chr10:32008730-32008451 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-305
Cow position: chr10:2243609-2243304 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 45

Conread position: 1-308
Cow position: chr10:16928810-16928502 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 276, 101

Conread position: 1-309
Cow position: chr10:14333189-14333507 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-309
Cow position: chr10:38342709-38343032 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 0

Conread position: 1-309
Cow position: chr10:47909271-47908960 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 49

Conread position: 1-310
Cow position: chr10:21896999-21897310 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 32

Conread position: 1-310
Cow position: chr10:24294643-24294942 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 62

Conread position: 1-311
Cow position: chr10:4996684-4996992 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 231
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 43, 32

Conread position: 1-311
Cow position: chr10:10584782-10584468 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 173

Conread position: 1-311
Cow position: chr10:19842323-19842022 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 0

Conread position: 1-311
Cow position: chr10:21426647-21426966 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 0

Conread position: 1-311
Cow position: chr10:30682836-30683147 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 277

Conread position: 1-311
Cow position: chr10:32280502-32280182 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-311
Cow position: chr10:32364595-32364276 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 0

Conread position: 1-311
Cow position: chr10:32703418-32703098 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 0

Conread position: 1-311
Cow position: chr10:39776351-39776662 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 246

Conread position: 1-311
Cow position: chr10:40642587-40642276 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 35

Conread position: 1-311
Cow position: chr10:48374791-48375111 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 0

Conread position: 1-311
Cow position: chr10:51558052-51557732 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-311
Cow position: chr10:68096962-68097280 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 34

Conread position: 1-312
Cow position: chr10:6287398-6287081 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 49

Conread position: 1-312
Cow position: chr10:29844025-29844336 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 35

Conread position: 2-296
Cow position: chr10:53339865-53339570 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 197
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 122, 31

Conread position: 2-309
Cow position: chr10:8292781-8292468 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 240

Conread position: 2-311
Cow position: chr10:1380153-1379836 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 0

Conread position: 2-311
Cow position: chr10:2118372-2118691 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 0

Conread position: 2-311
Cow position: chr10:7279447-7279762 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 244

Conread position: 2-311
Cow position: chr10:12101740-12102049 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 131

Conread position: 2-311
Cow position: chr10:14855267-14854958 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 223
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 31, 113

Conread position: 2-311
Cow position: chr10:17958735-17958417 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 33

Conread position: 2-311
Cow position: chr10:37772544-37772228 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 252, 0

Conread position: 2-311
Cow position: chr10:38842818-38842499 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 0

Conread position: 2-311
Cow position: chr10:40149511-40149814 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 276, 56

Conread position: 2-311
Cow position: chr10:48170177-48169867 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 45

Conread position: 2-379
Cow position: chr10:6254808-6255178 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 124

Conread position: 2-384
Cow position: chr10:19513883-19513477 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 252, 0

Conread position: 3-311
Cow position: chr10:15620732-15621048 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 30

Conread position: 3-311
Cow position: chr10:22618761-22619072 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 252, 127

Conread position: 3-311
Cow position: chr10:26292835-26293153 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 92

Conread position: 3-311
Cow position: chr10:29629619-29629924 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 245, 0

Conread position: 4-310
Cow position: chr10:21516360-21516673 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 139

Conread position: 4-311
Cow position: chr10:38543270-38543575 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 247, 65

Conread position: 6-309
Cow position: chr10:38723923-38723612 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 133

Conread position: 13-311
Cow position: chr10:7895841-7896146 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 238, 0

Conread position: 13-311
Cow position: chr10:22344119-22343805 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 13-311
Cow position: chr10:23848606-23848298 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 13-311
Cow position: chr10:31856123-31855815 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 13-311
Cow position: chr10:39210400-39210096 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 37

Conread position: 13-311
Cow position: chr10:39813751-39814059 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 0

Conread position: 13-311
Cow position: chr10:46762842-46762544 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 238, 124

Conread position: 13-311
Cow position: chr10:53172677-53172985 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 13-311
Cow position: chr10:57554695-57555003 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 0

Conread position: 13-312
Cow position: chr10:51950456-51950762 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 238, 0

Conread position: 13-384
Cow position: chr10:25340793-25340400 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 21

Conread position: 14-308
Cow position: chr10:28031286-28031590 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 0

Conread position: 14-311
Cow position: chr10:57987060-57987367 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 0

Conread position: 17-384
Cow position: chr10:51780807-51781191 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 162

Conread position: 18-309
Cow position: chr10:45506805-45507093 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 193
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 73, 17

Conread position: 19-311
Cow position: chr10:39038423-39038720 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 223

Conread position: 29-311
Cow position: chr10:42115876-42115591 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 48

Conread position: 30-309
Cow position: chr10:57090643-57090359 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 199
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 21, 179

Conread position: 37-311
Cow position: chr10:1663345-1663625 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 175

Conread position: 38-311
Cow position: chr10:24309579-24309858 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 95

Conread position: 39-310
Cow position: chr10:32319064-32318795 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 202
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 174, 71

Conread position: 39-311
Cow position: chr10:4500565-4500299 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 209
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 181, 22

Conread position: 43-311
Cow position: chr10:24975222-24975496 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 96

Conread position: 44-311
Cow position: chr10:6002957-6003233 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 192
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 42, 132

Conread position: 47-309
Cow position: chr10:31044946-31045203 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 200
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 65, 152

Conread position: 51-309
Cow position: chr10:20381361-20381613 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 204
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 162, 65

Conread position: 58-310
Cow position: chr10:36467261-36467523 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 195
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 162, 0

Conread position: 82-384
Cow position: chr10:41635957-41635635 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 310

Conread position: 97-295
Cow position: chr10:37074348-37074547 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 166
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 122, 23

Conread position: 97-311
Cow position: chr10:39440716-39440497 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 139

Conread position: 98-311
Cow position: chr10:12546543-12546320 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 0

Conread position: 99-293
Cow position: chr10:22907653-22907854 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 147
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 120, 50

Conread position: 108-311
Cow position: chr10:28948012-28947800 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 164
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 65, 41

Conread position: 120-311
Cow position: chr10:11109133-11109334 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 169
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 0

Conread position: 125-311
Cow position: chr10:51086035-51085839 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 165
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 0

Conread position: 161-311
Cow position: chr10:41654790-41654636 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 127
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 93, 12

Conread position: 161-384
Cow position: chr10:46193616-46193381 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 183
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 58, 84

Conread position: 166-311
Cow position: chr10:55401245-55401090 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 120
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 53, 0

Conread position: 170-311
Cow position: chr10:60362315-60362171 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 116
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 82, 44

Conread position: 171-384
Cow position: chr10:22347431-22347201 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 180
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 84, 31

Conread position: 176-295
Cow position: chr10:8458415-8458286 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 111
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 32, 0

Conread position: 192-311
Cow position: chr10:14806329-14806206 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 107
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 86, 60

Conread position: 1-276
Cow position: chr11:35253009-35253276 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 251, 56

Conread position: 1-281
Cow position: chr11:25183326-25183053 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 27

Conread position: 1-308
Cow position: chr11:21897392-21897705 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 105

Conread position: 1-309
Cow position: chr11:10092964-10092651 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 236, 33

Conread position: 1-309
Cow position: chr11:53429731-53430049 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-311
Cow position: chr11:418431-418750 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 101

Conread position: 1-311
Cow position: chr11:3495269-3494955 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 50

Conread position: 1-311
Cow position: chr11:4267857-4268171 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 33

Conread position: 1-311
Cow position: chr11:7228544-7228227 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 0

Conread position: 1-311
Cow position: chr11:17548450-17548149 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 132

Conread position: 1-311
Cow position: chr11:24292745-24292430 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 15

Conread position: 1-311
Cow position: chr11:26122631-26122947 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 45

Conread position: 1-311
Cow position: chr11:26549791-26549473 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 0

Conread position: 1-311
Cow position: chr11:30201399-30201714 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 276, 0

Conread position: 1-311
Cow position: chr11:30254518-30254205 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 61

Conread position: 1-311
Cow position: chr11:32078489-32078809 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 0

Conread position: 1-311
Cow position: chr11:33602339-33602659 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-311
Cow position: chr11:44154797-44155105 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 0

Conread position: 1-311
Cow position: chr11:47737255-47737567 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 250, 49

Conread position: 1-311
Cow position: chr11:63391185-63391505 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-311
Cow position: chr11:67296718-67297035 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 46

Conread position: 1-311
Cow position: chr11:71331793-71331476 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 0

Conread position: 1-311
Cow position: chr11:74346695-74346388 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 95

Conread position: 1-311
Cow position: chr11:75392543-75392223 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-311
Cow position: chr11:85391533-85391853 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-312
Cow position: chr11:41168404-41168725 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-379
Cow position: chr11:15994452-15994056 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 36

Conread position: 1-384
Cow position: chr11:4054009-4054415 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 56

Conread position: 2-309
Cow position: chr11:9387539-9387841 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 34

Conread position: 2-311
Cow position: chr11:44580940-44581257 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 0

Conread position: 2-311
Cow position: chr11:56917713-56918018 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 47

Conread position: 2-311
Cow position: chr11:78358071-78357753 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 2-379
Cow position: chr11:30121356-30121751 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 252, 293

Conread position: 2-384
Cow position: chr11:9154900-9155295 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 32

Conread position: 3-302
Cow position: chr11:44254365-44254064 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 251, 170

Conread position: 3-309
Cow position: chr11:22934301-22934615 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 249, 0

Conread position: 3-311
Cow position: chr11:10850409-10850094 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 251, 0

Conread position: 3-311
Cow position: chr11:19061785-19062096 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 278

Conread position: 3-311
Cow position: chr11:19100194-19100511 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 68

Conread position: 3-311
Cow position: chr11:52421758-52421443 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 42

Conread position: 5-305
Cow position: chr11:78780848-78781151 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 24

Conread position: 11-311
Cow position: chr11:40403481-40403780 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 23

Conread position: 13-311
Cow position: chr11:4033120-4033421 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 38

Conread position: 13-311
Cow position: chr11:15987531-15987227 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 35

Conread position: 13-311
Cow position: chr11:23882289-23881981 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 13-311
Cow position: chr11:28227501-28227799 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 21

Conread position: 13-311
Cow position: chr11:32478534-32478833 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 265

Conread position: 13-311
Cow position: chr11:38600659-38600961 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 241, 33

Conread position: 13-311
Cow position: chr11:41744839-41744531 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 13-311
Cow position: chr11:47973573-47973881 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 13-311
Cow position: chr11:78791786-78792094 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 14-311
Cow position: chr11:17105404-17105708 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 240, 0

Conread position: 14-311
Cow position: chr11:66731434-66731130 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 233

Conread position: 15-311
Cow position: chr11:67445965-67446269 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 55

Conread position: 15-311
Cow position: chr11:67452931-67452625 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 0

Conread position: 17-311
Cow position: chr11:12096069-12095765 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 0

Conread position: 26-311
Cow position: chr11:24395580-24395290 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 228, 9

Conread position: 29-311
Cow position: chr11:39151187-39150902 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 6

Conread position: 37-311
Cow position: chr11:7720132-7720411 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 56

Conread position: 37-311
Cow position: chr11:82347157-82347430 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 207
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 214, 55

Conread position: 38-311
Cow position: chr11:261453-261709 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 203
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 214, 88

Conread position: 42-311
Cow position: chr11:30190053-30189780 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 200
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 34, 93

Conread position: 53-376
Cow position: chr11:12950907-12951260 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 115

Conread position: 63-311
Cow position: chr11:29666359-29666614 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 0

Conread position: 119-311
Cow position: chr11:47758088-47758290 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 164
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 82, 65

Conread position: 133-311
Cow position: chr11:5483384-5483199 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 154
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 121, 0

Conread position: 159-311
Cow position: chr11:1493597-1493758 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 130
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 60, 39

Conread position: 171-311
Cow position: chr11:12317885-12318035 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 128
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 48, 0

Conread position: 174-311
Cow position: chr11:66860359-66860505 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 121
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 42, 0

Conread position: 215-311
Cow position: chr11:58138497-58138394 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 91
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 39, 0

Conread position: 1-277
Cow position: chr12:18467367-18467089 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 125

Conread position: 1-292
Cow position: chr12:18585250-18584951 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-309
Cow position: chr12:23138746-23139059 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 46

Conread position: 1-310
Cow position: chr12:251265-251580 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 130

Conread position: 1-311
Cow position: chr12:1407410-1407090 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 35

Conread position: 1-311
Cow position: chr12:3717696-3718016 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 33

Conread position: 1-311
Cow position: chr12:25260937-25261255 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 36

Conread position: 1-311
Cow position: chr12:42605602-42605918 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 245

Conread position: 2-309
Cow position: chr12:28834749-28835065 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 100

Conread position: 2-309
Cow position: chr12:42856953-42857267 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 252, 0

Conread position: 2-311
Cow position: chr12:3179945-3179630 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 252, 218

Conread position: 2-311
Cow position: chr12:8675496-8675817 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 0

Conread position: 3-311
Cow position: chr12:11100820-11100505 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 251, 0

Conread position: 3-311
Cow position: chr12:22747787-22747473 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 224

Conread position: 3-311
Cow position: chr12:28764457-28764772 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 256

Conread position: 3-311
Cow position: chr12:30686317-30686002 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 187

Conread position: 3-311
Cow position: chr12:36212830-36212510 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 3-384
Cow position: chr12:24980258-24979853 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 0

Conread position: 13-310
Cow position: chr12:22571409-22571107 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 238, 192

Conread position: 13-311
Cow position: chr12:12755593-12755901 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 13-311
Cow position: chr12:20460659-20460964 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 241, 0

Conread position: 13-311
Cow position: chr12:24993405-24993713 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 13-311
Cow position: chr12:25266771-25267079 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 13-311
Cow position: chr12:27853385-27853701 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 13-311
Cow position: chr12:33925957-33926265 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 13-312
Cow position: chr12:21430525-21430216 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 0

Conread position: 14-311
Cow position: chr12:37561569-37561266 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 238, 116

Conread position: 15-368
Cow position: chr12:22203115-22203479 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 19

Conread position: 16-311
Cow position: chr12:24432333-24432631 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 20

Conread position: 25-311
Cow position: chr12:19872834-19872543 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 252, 0

Conread position: 27-384
Cow position: chr12:21091187-21091559 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 226
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 227, 0

Conread position: 29-310
Cow position: chr12:23160348-23160629 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 213
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 191, 126

Conread position: 66-311
Cow position: chr12:24030434-24030687 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 50

Conread position: 83-311
Cow position: chr12:27930261-27930496 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 0

Conread position: 92-311
Cow position: chr12:14213684-14213913 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 0

Conread position: 112-384
Cow position: chr12:15949340-15949638 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 0

Conread position: 133-311
Cow position: chr12:31331882-31332067 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 159
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 0

Conread position: 146-311
Cow position: chr12:15775837-15775662 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 149
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 73, 0

Conread position: 165-311
Cow position: chr12:25097830-25097974 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 117
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 89, 8

Conread position: 174-311
Cow position: chr12:14659948-14660086 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 117
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 77, 13

Conread position: 174-311
Cow position: chr12:20995690-20995832 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 114
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 81, 0

Conread position: 1-277
Cow position: chr13:60921407-60921667 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 196
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 162, 24

Conread position: 1-308
Cow position: chr13:32922907-32923221 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 33

Conread position: 1-309
Cow position: chr13:28527541-28527857 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-309
Cow position: chr13:32549125-32548808 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 115

Conread position: 1-310
Cow position: chr13:13902227-13901914 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 158

Conread position: 1-310
Cow position: chr13:26846844-26846539 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 34

Conread position: 1-311
Cow position: chr13:4733899-4733580 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-311
Cow position: chr13:4943751-4943434 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 250, 0

Conread position: 1-311
Cow position: chr13:5230583-5230896 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 45

Conread position: 1-311
Cow position: chr13:11389573-11389253 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-311
Cow position: chr13:15279426-15279744 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 17

Conread position: 1-311
Cow position: chr13:15447130-15447430 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 277, 33

Conread position: 1-311
Cow position: chr13:17310783-17310465 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 54

Conread position: 1-311
Cow position: chr13:18330760-18331060 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 88

Conread position: 1-311
Cow position: chr13:30305558-30305243 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 61

Conread position: 1-311
Cow position: chr13:30652919-30653237 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 184

Conread position: 1-311
Cow position: chr13:33333982-33334296 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 210

Conread position: 1-311
Cow position: chr13:34039975-34040297 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-311
Cow position: chr13:34509447-34509761 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 27

Conread position: 1-311
Cow position: chr13:50191259-50191580 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 0

Conread position: 1-380
Cow position: chr13:47368539-47368134 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 68

Conread position: 2-305
Cow position: chr13:21906572-21906882 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 36

Conread position: 2-309
Cow position: chr13:35759922-35759607 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 91

Conread position: 2-309
Cow position: chr13:60698435-60698745 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 74

Conread position: 2-311
Cow position: chr13:15922093-15922409 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 252, 0

Conread position: 2-311
Cow position: chr13:23455804-23455485 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 0

Conread position: 2-311
Cow position: chr13:30240914-30240604 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 14

Conread position: 2-311
Cow position: chr13:32734822-32735138 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 180

Conread position: 2-311
Cow position: chr13:54239061-54239379 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 90

Conread position: 3-308
Cow position: chr13:53543809-53544111 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 230
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 16, 34

Conread position: 3-311
Cow position: chr13:3481499-3481811 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 226
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 100, 55

Conread position: 3-311
Cow position: chr13:4735641-4735324 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 0

Conread position: 3-311
Cow position: chr13:30470011-30470317 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 251, 216

Conread position: 4-311
Cow position: chr13:25381766-25381452 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 98

Conread position: 4-311
Cow position: chr13:34344276-34343959 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 0

Conread position: 4-311
Cow position: chr13:34870325-34870010 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 107

Conread position: 13-311
Cow position: chr13:562033-562341 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 13-311
Cow position: chr13:5499633-5499932 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 265, 184

Conread position: 13-311
Cow position: chr13:19566072-19565763 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 80

Conread position: 13-311
Cow position: chr13:35539520-35539211 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 0

Conread position: 13-311
Cow position: chr13:49613186-49613487 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 37

Conread position: 13-311
Cow position: chr13:49976023-49975724 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 238, 37

Conread position: 13-311
Cow position: chr13:60647231-60647533 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 37

Conread position: 14-311
Cow position: chr13:31728545-31728850 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 145

Conread position: 24-311
Cow position: chr13:3651919-3652214 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 0

Conread position: 25-311
Cow position: chr13:44463586-44463885 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 211
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 20, 54

Conread position: 26-311
Cow position: chr13:7049981-7049697 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 9

Conread position: 53-311
Cow position: chr13:14400791-14401052 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 49

Conread position: 80-311
Cow position: chr13:4667377-4667138 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 164
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 83, 11

Conread position: 80-311
Cow position: chr13:8068869-8069107 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 10

Conread position: 81-311
Cow position: chr13:11762350-11762589 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 90

Conread position: 89-311
Cow position: chr13:19044286-19044514 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 177
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 97, 124

Conread position: 94-311
Cow position: chr13:21698551-21698325 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 0

Conread position: 108-311
Cow position: chr13:60511835-60511623 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 17

Conread position: 114-310
Cow position: chr13:46459654-46459862 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 156
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 10, 147

Conread position: 118-311
Cow position: chr13:9300131-9299934 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 162
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 136, 98

Conread position: 121-384
Cow position: chr13:16252275-16252560 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 89

Conread position: 135-309
Cow position: chr13:31609562-31609742 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 156
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 178

Conread position: 146-276
Cow position: chr13:34322778-34322915 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 116
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 11, 0

Conread position: 155-384
Cow position: chr13:6360059-6359801 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 196
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 64, 0

Conread position: 156-384
Cow position: chr13:37489329-37489569 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 182
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 122, 82

Conread position: 164-311
Cow position: chr13:16921664-16921507 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 134
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 55, 0

Conread position: 182-311
Cow position: chr13:54312288-54312150 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 112
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 30, 59

Conread position: 1-309
Cow position: chr14:16917489-16917806 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 0

Conread position: 1-309
Cow position: chr14:33679301-33679002 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 101

Conread position: 1-309
Cow position: chr14:41411984-41411667 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 35

Conread position: 1-309
Cow position: chr14:48827516-48827198 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 119

Conread position: 1-310
Cow position: chr14:9450294-9450610 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 250, 0

Conread position: 1-310
Cow position: chr14:48361420-48361092 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 0

Conread position: 1-311
Cow position: chr14:192291-191973 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 0

Conread position: 1-311
Cow position: chr14:5531575-5531258 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 0

Conread position: 1-311
Cow position: chr14:7988753-7988436 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 250, 0

Conread position: 1-311
Cow position: chr14:11475055-11475369 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 125

Conread position: 1-311
Cow position: chr14:13782099-13781784 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 91

Conread position: 1-311
Cow position: chr14:15273313-15273632 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 0

Conread position: 1-311
Cow position: chr14:16997799-16998115 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 0

Conread position: 1-311
Cow position: chr14:19549434-19549118 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 250, 33

Conread position: 1-311
Cow position: chr14:22029233-22029548 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 33

Conread position: 1-311
Cow position: chr14:23255103-23255421 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 92

Conread position: 1-311
Cow position: chr14:28210138-28209818 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-311
Cow position: chr14:30713543-30713863 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-311
Cow position: chr14:34668549-34668870 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 0

Conread position: 1-311
Cow position: chr14:34904593-34904274 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 200

Conread position: 1-311
Cow position: chr14:37226408-37226077 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 0

Conread position: 1-311
Cow position: chr14:44260704-44260379 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 0

Conread position: 1-311
Cow position: chr14:46123367-46123048 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 92

Conread position: 1-311
Cow position: chr14:46434855-46434538 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 115

Conread position: 1-311
Cow position: chr14:46503928-46503612 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 212

Conread position: 1-311
Cow position: chr14:50113605-50113289 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 161

Conread position: 1-384
Cow position: chr14:35383412-35383802 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 27

Conread position: 1-384
Cow position: chr14:43560471-43560063 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 94

Conread position: 2-311
Cow position: chr14:32449199-32448880 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 0

Conread position: 2-311
Cow position: chr14:32472903-32473223 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 0

Conread position: 2-311
Cow position: chr14:32584791-32585105 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 240

Conread position: 2-380
Cow position: chr14:13581068-13580672 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 252, 0

Conread position: 2-380
Cow position: chr14:14031147-14031543 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 238, 70

Conread position: 3-311
Cow position: chr14:17758383-17758703 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 31

Conread position: 3-311
Cow position: chr14:24524184-24523865 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 222
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 75, 25

Conread position: 3-311
Cow position: chr14:44554061-44553747 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 251, 139

Conread position: 4-311
Cow position: chr14:19326023-19326339 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 190

Conread position: 4-311
Cow position: chr14:33491049-33490746 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 227
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 215, 25

Conread position: 5-311
Cow position: chr14:30665354-30665661 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 46

Conread position: 6-311
Cow position: chr14:24992902-24993200 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 218
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 269, 30

Conread position: 13-311
Cow position: chr14:1660679-1660376 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 29

Conread position: 13-311
Cow position: chr14:14421181-14421498 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 236
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 43, 20

Conread position: 13-311
Cow position: chr14:44691407-44691100 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 105

Conread position: 13-311
Cow position: chr14:45087435-45087125 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 104

Conread position: 13-311
Cow position: chr14:46222309-46222001 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 13-384
Cow position: chr14:13237576-13237954 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 279

Conread position: 14-311
Cow position: chr14:45026730-45027035 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 0

Conread position: 14-384
Cow position: chr14:13861293-13861686 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 0

Conread position: 15-311
Cow position: chr14:46389036-46389339 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 232

Conread position: 24-309
Cow position: chr14:38813265-38813554 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 214
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 156, 9

Conread position: 26-309
Cow position: chr14:30130697-30130416 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 22

Conread position: 37-312
Cow position: chr14:9849703-9849975 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 96

Conread position: 38-311
Cow position: chr14:38915901-38916170 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 193
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 181, 31

Conread position: 41-384
Cow position: chr14:46468993-46469359 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 233, 85

Conread position: 43-311
Cow position: chr14:449981-449712 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 200
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 85, 76

Conread position: 53-311
Cow position: chr14:7474536-7474272 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 160

Conread position: 54-311
Cow position: chr14:36908018-36908285 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 57-311
Cow position: chr14:43557142-43556879 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 191
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 97, 102

Conread position: 93-310
Cow position: chr14:13305252-13305026 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 127

Conread position: 109-311
Cow position: chr14:34763022-34763234 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 0

Conread position: 126-311
Cow position: chr14:30594092-30594285 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 149
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 64, 0

Conread position: 141-311
Cow position: chr14:40344413-40344232 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 149
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 10, 0

Conread position: 152-311
Cow position: chr14:13275402-13275237 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 135
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 87, 10

Conread position: 159-311
Cow position: chr14:5515017-5514855 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 133
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 59, 0

Conread position: 160-311
Cow position: chr14:2296567-2296406 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 121
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 59, 0

Conread position: 166-311
Cow position: chr14:16807246-16807400 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 131
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 47, 0

Conread position: 174-309
Cow position: chr14:17688916-17688771 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 121
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 45, 0

Conread position: 174-311
Cow position: chr14:33391862-33392005 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 114
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 81, 38

Conread position: 187-311
Cow position: chr14:40385868-40386002 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 114
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 32, 0

Conread position: 1-304
Cow position: chr15:42939150-42938837 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-310
Cow position: chr15:4727446-4727129 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 0

Conread position: 1-311
Cow position: chr15:2806637-2806953 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 0

Conread position: 1-311
Cow position: chr15:3258805-3259118 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 95

Conread position: 1-311
Cow position: chr15:4387990-4387675 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 45

Conread position: 1-311
Cow position: chr15:4639174-4638857 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 249, 0

Conread position: 1-311
Cow position: chr15:5497296-5496982 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 198

Conread position: 1-311
Cow position: chr15:6563418-6563098 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-311
Cow position: chr15:8358899-8358583 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 224
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 142, 42

Conread position: 1-311
Cow position: chr15:8753121-8752818 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 235
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 182, 51

Conread position: 1-311
Cow position: chr15:9395202-9394886 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 46

Conread position: 1-311
Cow position: chr15:12418469-12418787 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 31

Conread position: 1-311
Cow position: chr15:14579906-14580226 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 0

Conread position: 1-311
Cow position: chr15:15344864-15345184 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-311
Cow position: chr15:18578951-18578632 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 148

Conread position: 1-311
Cow position: chr15:20405497-20405815 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 160

Conread position: 1-311
Cow position: chr15:20412838-20412519 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 15

Conread position: 1-311
Cow position: chr15:21663503-21663821 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 1-311
Cow position: chr15:27635668-27635348 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-311
Cow position: chr15:31363706-31363386 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-311
Cow position: chr15:42532161-42531841 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 35

Conread position: 1-311
Cow position: chr15:43292936-43293246 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 33

Conread position: 1-311
Cow position: chr15:51219981-51219662 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 0

Conread position: 1-384
Cow position: chr15:14756238-14755846 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 32

Conread position: 1-384
Cow position: chr15:20457292-20456889 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 52

Conread position: 2-304
Cow position: chr15:36356847-36357154 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 33

Conread position: 2-309
Cow position: chr15:4673484-4673167 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 0

Conread position: 2-309
Cow position: chr15:6551524-6551840 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 87

Conread position: 2-311
Cow position: chr15:2014739-2014427 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 252, 203

Conread position: 2-311
Cow position: chr15:2900013-2900331 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 32

Conread position: 2-311
Cow position: chr15:6153692-6154009 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 33

Conread position: 2-311
Cow position: chr15:7262864-7262537 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 45

Conread position: 2-311
Cow position: chr15:7329529-7329839 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 232
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 19, 144

Conread position: 2-311
Cow position: chr15:12365644-12365338 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 53

Conread position: 2-311
Cow position: chr15:16189530-16189849 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 0

Conread position: 2-311
Cow position: chr15:24297433-24297114 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 0

Conread position: 2-311
Cow position: chr15:29969119-29969424 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 250, 74

Conread position: 2-311
Cow position: chr15:38982890-38982571 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 0

Conread position: 2-384
Cow position: chr15:6119652-6119250 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 0

Conread position: 3-276
Cow position: chr15:32702500-32702763 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 174

Conread position: 3-278
Cow position: chr15:20354239-20354520 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 205
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 149, 30

Conread position: 3-310
Cow position: chr15:14574064-14574387 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 230
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 64, 39

Conread position: 3-311
Cow position: chr15:27748248-27747930 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 0

Conread position: 3-311
Cow position: chr15:32491651-32491968 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 0

Conread position: 3-311
Cow position: chr15:51911304-51911614 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 135

Conread position: 3-312
Cow position: chr15:7270579-7270265 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 251, 210

Conread position: 11-311
Cow position: chr15:37472337-37472638 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 241, 91

Conread position: 12-311
Cow position: chr15:21913753-21914056 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 222
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 169, 31

Conread position: 13-309
Cow position: chr15:32696394-32696076 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 51

Conread position: 13-311
Cow position: chr15:7565230-7564924 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 148

Conread position: 13-311
Cow position: chr15:10825698-10825393 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 112

Conread position: 13-311
Cow position: chr15:13430051-13429744 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 13-311
Cow position: chr15:18229293-18228985 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 13-311
Cow position: chr15:18265534-18265839 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 241, 0

Conread position: 13-311
Cow position: chr15:20017249-20017557 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 13-311
Cow position: chr15:21533901-21534202 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 229

Conread position: 13-311
Cow position: chr15:36330231-36330537 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 21

Conread position: 13-311
Cow position: chr15:50149550-50149242 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 13-384
Cow position: chr15:31586169-31586567 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 37

Conread position: 14-309
Cow position: chr15:6280854-6280553 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 21

Conread position: 20-311
Cow position: chr15:4917418-4917119 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 103

Conread position: 29-277
Cow position: chr15:6066301-6066549 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 49

Conread position: 29-311
Cow position: chr15:7882130-7881841 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 6

Conread position: 29-311
Cow position: chr15:24796098-24795808 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 100

Conread position: 33-311
Cow position: chr15:9014098-9013814 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 218
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 12, 72

Conread position: 39-311
Cow position: chr15:16509066-16508785 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 133

Conread position: 42-311
Cow position: chr15:53411289-53411019 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 50

Conread position: 43-384
Cow position: chr15:29341854-29342190 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 14

Conread position: 98-310
Cow position: chr15:3721889-3722108 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 0

Conread position: 131-384
Cow position: chr15:36669747-36669491 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 195
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 121, 31

Conread position: 136-311
Cow position: chr15:4924239-4924054 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 149
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 82, 0

Conread position: 167-311
Cow position: chr15:51767318-51767469 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 129
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 87, 0

Conread position: 174-308
Cow position: chr15:6224902-6224760 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 115
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 41, 0

Conread position: 174-311
Cow position: chr15:314014-314159 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 121
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 34, 0

Conread position: 175-326
Cow position: chr15:44072533-44072374 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 131
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 44, 30

Conread position: 176-357
Cow position: chr15:17406586-17406398 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 143
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 76, 30

Conread position: 179-311
Cow position: chr15:581481-581338 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 117
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 40, 0

Conread position: 182-370
Cow position: chr15:36279903-36280112 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 157
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 37, 0

Conread position: 197-311
Cow position: chr15:4767190-4767066 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 101
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 24, 0

Conread position: 1-276
Cow position: chr16:5526214-5526490 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 53

Conread position: 1-278
Cow position: chr16:18617246-18617517 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 34

Conread position: 1-292
Cow position: chr16:18495853-18496148 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 246, 153

Conread position: 1-308
Cow position: chr16:25455570-25455883 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 265

Conread position: 1-309
Cow position: chr16:5655069-5654756 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 115

Conread position: 1-310
Cow position: chr16:5891897-5891589 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 91

Conread position: 1-311
Cow position: chr16:839175-838861 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 243

Conread position: 1-311
Cow position: chr16:1565785-1566096 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 33

Conread position: 1-311
Cow position: chr16:2409003-2409316 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 66

Conread position: 1-311
Cow position: chr16:2725328-2725647 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 0

Conread position: 1-311
Cow position: chr16:3144507-3144817 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 45

Conread position: 1-311
Cow position: chr16:3331802-3331489 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 155

Conread position: 1-311
Cow position: chr16:4462434-4462771 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 33

Conread position: 1-311
Cow position: chr16:7466505-7466185 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-311
Cow position: chr16:7674567-7674887 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-311
Cow position: chr16:8814212-8814532 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 35

Conread position: 1-311
Cow position: chr16:10440134-10439823 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 52

Conread position: 1-311
Cow position: chr16:15186959-15186644 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 252, 33

Conread position: 1-311
Cow position: chr16:15980494-15980810 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 202

Conread position: 1-311
Cow position: chr16:19276022-19275710 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 250, 133

Conread position: 1-311
Cow position: chr16:23250096-23250404 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 80

Conread position: 1-311
Cow position: chr16:27731490-27731807 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 0

Conread position: 1-311
Cow position: chr16:29048922-29048602 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 35

Conread position: 1-311
Cow position: chr16:31586805-31587124 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 148

Conread position: 1-311
Cow position: chr16:36241038-36240731 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 33

Conread position: 1-311
Cow position: chr16:37478969-37479279 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 129

Conread position: 1-311
Cow position: chr16:39034811-39035126 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 15

Conread position: 1-311
Cow position: chr16:41033195-41032875 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 0

Conread position: 1-311
Cow position: chr16:41164868-41165180 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 276, 52

Conread position: 1-311
Cow position: chr16:43895371-43895688 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 0

Conread position: 1-311
Cow position: chr16:46102818-46103132 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 228
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 128, 143

Conread position: 1-311
Cow position: chr16:53445879-53446199 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-311
Cow position: chr16:54323428-54323748 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-330
Cow position: chr16:20635622-20635956 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 175

Conread position: 1-349
Cow position: chr16:3149139-3149487 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 45

Conread position: 1-384
Cow position: chr16:2273954-2273549 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 161

Conread position: 1-384
Cow position: chr16:41161578-41161983 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 33

Conread position: 2-309
Cow position: chr16:4425984-4425669 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 196

Conread position: 2-311
Cow position: chr16:3031611-3031924 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 276, 249

Conread position: 2-311
Cow position: chr16:3770120-3770437 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 0

Conread position: 2-311
Cow position: chr16:14663413-14663730 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 234

Conread position: 2-311
Cow position: chr16:25087501-25087189 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 31

Conread position: 2-311
Cow position: chr16:25343867-25343548 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 0

Conread position: 2-311
Cow position: chr16:26665607-26665303 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 275, 186

Conread position: 2-311
Cow position: chr16:28194409-28194728 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 0

Conread position: 2-311
Cow position: chr16:40294280-40294590 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 252, 106

Conread position: 2-384
Cow position: chr16:41684402-41684797 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 169

Conread position: 3-311
Cow position: chr16:1862332-1862025 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 251, 32

Conread position: 3-311
Cow position: chr16:26991057-26991376 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 200

Conread position: 3-311
Cow position: chr16:29207322-29207646 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 45

Conread position: 3-311
Cow position: chr16:42162634-42162320 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 40

Conread position: 13-276
Cow position: chr16:3010715-3010454 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 241, 37

Conread position: 13-309
Cow position: chr16:28168438-28168744 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 13-310
Cow position: chr16:30073273-30072964 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 205
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 42, 93

Conread position: 13-311
Cow position: chr16:34423-34117 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 150

Conread position: 13-311
Cow position: chr16:10373802-10374108 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 0

Conread position: 13-311
Cow position: chr16:11285097-11284796 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 37

Conread position: 13-311
Cow position: chr16:20277733-20277425 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 13-311
Cow position: chr16:20642387-20642081 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 79

Conread position: 13-311
Cow position: chr16:23365032-23365335 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 22

Conread position: 13-311
Cow position: chr16:23876650-23876952 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 35

Conread position: 13-311
Cow position: chr16:24621818-24622123 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 253

Conread position: 13-311
Cow position: chr16:26652499-26652191 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 13-384
Cow position: chr16:16239219-16239614 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 241, 43

Conread position: 14-309
Cow position: chr16:3348686-3348382 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 230, 27

Conread position: 14-310
Cow position: chr16:1434076-1433764 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 14-311
Cow position: chr16:21189113-21188806 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 0

Conread position: 14-311
Cow position: chr16:23985189-23984882 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 0

Conread position: 14-311
Cow position: chr16:47403262-47402958 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 238, 0

Conread position: 36-311
Cow position: chr16:25955706-25955990 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 209
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 11, 103

Conread position: 37-276
Cow position: chr16:5876199-5875963 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 7

Conread position: 37-311
Cow position: chr16:12536090-12536374 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 16

Conread position: 44-276
Cow position: chr16:25173130-25172898 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 171
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 175, 108

Conread position: 44-311
Cow position: chr16:49254403-49254676 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 87

Conread position: 46-308
Cow position: chr16:5590214-5589953 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 196
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 121, 58

Conread position: 52-311
Cow position: chr16:39645493-39645225 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 185

Conread position: 55-311
Cow position: chr16:2890674-2890940 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 0

Conread position: 68-311
Cow position: chr16:16031737-16031489 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 233

Conread position: 73-311
Cow position: chr16:56915289-56915533 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 188
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 146, 59

Conread position: 85-311
Cow position: chr16:25463100-25463332 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 71

Conread position: 96-311
Cow position: chr16:25126755-25126977 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 82

Conread position: 97-311
Cow position: chr16:10770675-10770456 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 169
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 83, 61

Conread position: 109-311
Cow position: chr16:818496-818286 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 163
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 110, 43

Conread position: 117-311
Cow position: chr16:25443408-25443205 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 162
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 94, 0

Conread position: 129-311
Cow position: chr16:5663604-5663419 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 155
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 125, 55

Conread position: 133-311
Cow position: chr16:4798958-4799144 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 150
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 87, 72

Conread position: 158-311
Cow position: chr16:55149969-55149809 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 125
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 61, 147

Conread position: 159-311
Cow position: chr16:16538541-16538384 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 133
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 56, 92

Conread position: 160-311
Cow position: chr16:416450-416298 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 131
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 116, 40

Conread position: 160-311
Cow position: chr16:39365149-39365308 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 131
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 59, 14

Conread position: 166-311
Cow position: chr16:28469053-28469208 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 134
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 53, 0

Conread position: 174-311
Cow position: chr16:15568974-15568830 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 127
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 42, 81

Conread position: 186-311
Cow position: chr16:25259512-25259381 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 111
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 68, 125

Conread position: 1-310
Cow position: chr17:1655294-1655608 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 14

Conread position: 1-311
Cow position: chr17:137099-136780 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 0

Conread position: 1-311
Cow position: chr17:253279-252962 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 199

Conread position: 1-311
Cow position: chr17:452292-451975 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 0

Conread position: 1-311
Cow position: chr17:1569930-1570246 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 246, 214

Conread position: 1-311
Cow position: chr17:4062789-4062476 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 201

Conread position: 1-311
Cow position: chr17:6070992-6070683 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 33

Conread position: 1-311
Cow position: chr17:6262320-6262002 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 0

Conread position: 1-311
Cow position: chr17:8204386-8204073 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 243

Conread position: 1-311
Cow position: chr17:11380730-11381051 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 0

Conread position: 1-311
Cow position: chr17:15709533-15709853 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-311
Cow position: chr17:16855638-16855961 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 226, 0

Conread position: 1-311
Cow position: chr17:16903342-16903026 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 245

Conread position: 1-311
Cow position: chr17:24784626-24784312 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 209

Conread position: 1-311
Cow position: chr17:25738757-25738437 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 35

Conread position: 1-311
Cow position: chr17:29825511-29825825 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 47

Conread position: 1-366
Cow position: chr17:20097858-20098238 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 34

Conread position: 1-383
Cow position: chr17:15438255-15437858 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-384
Cow position: chr17:16897640-16898036 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 32

Conread position: 2-311
Cow position: chr17:147389-147067 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 0

Conread position: 2-311
Cow position: chr17:13930350-13930031 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 0

Conread position: 2-311
Cow position: chr17:21768656-21768971 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 249, 209

Conread position: 2-311
Cow position: chr17:41012040-41011724 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 26

Conread position: 2-380
Cow position: chr17:36816150-36815758 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 16

Conread position: 3-309
Cow position: chr17:14242282-14241958 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 0

Conread position: 13-311
Cow position: chr17:3742608-3742300 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 13-311
Cow position: chr17:13418848-13418540 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 13-311
Cow position: chr17:15140898-15141193 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 241, 37

Conread position: 13-311
Cow position: chr17:15808419-15808110 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 13-311
Cow position: chr17:17257963-17257659 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 37

Conread position: 13-311
Cow position: chr17:18124492-18124788 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 135

Conread position: 16-310
Cow position: chr17:3284316-3284020 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 17

Conread position: 23-311
Cow position: chr17:4162000-4162309 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 220
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 65, 12

Conread position: 28-311
Cow position: chr17:2245616-2245905 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 23

Conread position: 29-311
Cow position: chr17:33282910-33283194 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 5

Conread position: 34-311
Cow position: chr17:2553834-2554121 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 0

Conread position: 37-311
Cow position: chr17:11085258-11085539 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 0

Conread position: 57-311
Cow position: chr17:34575162-34574898 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 0

Conread position: 68-311
Cow position: chr17:3236336-3236104 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 176
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 131, 19

Conread position: 75-311
Cow position: chr17:28026105-28026352 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 84-310
Cow position: chr17:6080889-6080655 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 170
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 63, 96

Conread position: 144-311
Cow position: chr17:19216393-19216568 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 146
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 62, 0

Conread position: 145-311
Cow position: chr17:14897275-14897101 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 142
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 74, 25

Conread position: 174-311
Cow position: chr17:22562190-22562047 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 121
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 45, 26

Conread position: 182-311
Cow position: chr17:52580-52720 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 112
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 37, 0

Conread position: 182-311
Cow position: chr17:14935660-14935799 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 115
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 37, 0

Conread position: 209-311
Cow position: chr17:29303023-29302914 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 96
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 45, 0

Conread position: 212-384
Cow position: chr17:35990372-35990562 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 149
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 65, 0

Conread position: 1-275
Cow position: chr18:16173935-16174207 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 45

Conread position: 1-287
Cow position: chr18:38160183-38160478 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-309
Cow position: chr18:51662825-51662507 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-309
Cow position: chr18:56484002-56484312 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 118

Conread position: 1-311
Cow position: chr18:1956493-1956813 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-311
Cow position: chr18:14418652-14418329 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 234, 0

Conread position: 1-311
Cow position: chr18:16464191-16464498 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 47

Conread position: 1-311
Cow position: chr18:21530201-21529884 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 250, 0

Conread position: 1-311
Cow position: chr18:23801698-23801381 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 183

Conread position: 1-311
Cow position: chr18:27835409-27835728 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 200

Conread position: 1-311
Cow position: chr18:28969611-28969928 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 0

Conread position: 1-311
Cow position: chr18:29863930-29864249 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 186

Conread position: 1-311
Cow position: chr18:32165257-32165569 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 33

Conread position: 1-311
Cow position: chr18:36511296-36510979 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 251, 0

Conread position: 1-311
Cow position: chr18:36775951-36775632 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 66

Conread position: 1-311
Cow position: chr18:37508640-37508324 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 92

Conread position: 1-311
Cow position: chr18:38090681-38090989 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 239
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 72, 34

Conread position: 1-311
Cow position: chr18:51484273-51483953 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-311
Cow position: chr18:52630583-52630888 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 54

Conread position: 2-310
Cow position: chr18:20691516-20691819 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 209
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 152, 9

Conread position: 2-311
Cow position: chr18:14128613-14128921 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 273, 82

Conread position: 2-311
Cow position: chr18:27168309-27167985 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 0

Conread position: 2-311
Cow position: chr18:40159001-40158685 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 249, 0

Conread position: 2-311
Cow position: chr18:52655487-52655173 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 252, 87

Conread position: 3-311
Cow position: chr18:11272171-11272487 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 242

Conread position: 3-384
Cow position: chr18:19355036-19354634 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 79

Conread position: 4-384
Cow position: chr18:54026473-54026075 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 189

Conread position: 13-276
Cow position: chr18:5202190-5201922 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 13-311
Cow position: chr18:603801-604097 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 37

Conread position: 13-311
Cow position: chr18:3755608-3755300 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 13-311
Cow position: chr18:26243914-26244219 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 241, 0

Conread position: 13-311
Cow position: chr18:28928927-28929228 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 53

Conread position: 13-311
Cow position: chr18:30762294-30762602 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 13-311
Cow position: chr18:37700830-37701133 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 37

Conread position: 13-311
Cow position: chr18:51696957-51696649 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 37

Conread position: 13-311
Cow position: chr18:55417388-55417083 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 238, 0

Conread position: 14-326
Cow position: chr18:33101984-33101666 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 20

Conread position: 19-311
Cow position: chr18:1047005-1046713 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 220
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 194, 24

Conread position: 37-311
Cow position: chr18:40483645-40483365 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 38

Conread position: 38-311
Cow position: chr18:39813008-39813273 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 204
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 176, 12

Conread position: 43-305
Cow position: chr18:15171510-15171243 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 54

Conread position: 73-311
Cow position: chr18:25941507-25941259 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 0

Conread position: 82-311
Cow position: chr18:32656285-32656046 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 0

Conread position: 82-311
Cow position: chr18:44148820-44149050 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 166
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 83, 93

Conread position: 83-311
Cow position: chr18:9661310-9661075 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 177
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 137, 153

Conread position: 87-311
Cow position: chr18:19457459-19457221 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 0

Conread position: 119-311
Cow position: chr18:14132953-14132751 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 166
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 0

Conread position: 135-311
Cow position: chr18:28767344-28767158 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 157
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 84, 0

Conread position: 145-309
Cow position: chr18:47744027-47743853 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 149
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 74, 0

Conread position: 154-311
Cow position: chr18:29070973-29070807 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 129
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 13, 20

Conread position: 160-311
Cow position: chr18:36310175-36310018 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 122
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 76, 60

Conread position: 180-311
Cow position: chr18:37664897-37664757 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 111
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 39, 57

Conread position: 1-275
Cow position: chr19:38559606-38559881 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 195
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 219, 129

Conread position: 1-276
Cow position: chr19:25378618-25378338 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 102

Conread position: 1-308
Cow position: chr19:33876097-33875781 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 221, 0

Conread position: 1-309
Cow position: chr19:4388262-4387958 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 35

Conread position: 1-311
Cow position: chr19:207186-206867 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 35

Conread position: 1-311
Cow position: chr19:257992-257676 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 75

Conread position: 1-311
Cow position: chr19:5732184-5731875 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 33

Conread position: 1-311
Cow position: chr19:7490780-7490463 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 0

Conread position: 1-311
Cow position: chr19:15445183-15445498 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 241

Conread position: 1-311
Cow position: chr19:39665869-39666186 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 0

Conread position: 1-311
Cow position: chr19:40834582-40834899 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 0

Conread position: 1-311
Cow position: chr19:40885064-40885382 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 0

Conread position: 2-310
Cow position: chr19:40849806-40850123 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 262

Conread position: 2-311
Cow position: chr19:436657-436975 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 68

Conread position: 2-311
Cow position: chr19:9705506-9705819 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 33

Conread position: 2-311
Cow position: chr19:12775804-12775485 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 0

Conread position: 2-311
Cow position: chr19:28579019-28579328 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 34

Conread position: 2-311
Cow position: chr19:44033146-44032833 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 228
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 15, 9

Conread position: 3-307
Cow position: chr19:35382474-35382782 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 36

Conread position: 13-309
Cow position: chr19:41003-40710 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 241, 155

Conread position: 13-311
Cow position: chr19:165459-165760 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 35

Conread position: 13-311
Cow position: chr19:7344701-7344396 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 38

Conread position: 13-311
Cow position: chr19:7481267-7481575 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 13-311
Cow position: chr19:16317940-16318247 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 50

Conread position: 13-311
Cow position: chr19:20107411-20107087 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 0

Conread position: 13-311
Cow position: chr19:39182869-39183177 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 13-311
Cow position: chr19:43147344-43147036 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 26-311
Cow position: chr19:33649528-33649825 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 37-311
Cow position: chr19:42297479-42297764 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 0

Conread position: 47-311
Cow position: chr19:21338207-21338481 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 0

Conread position: 47-384
Cow position: chr19:17882589-17882245 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 248
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 135, 83

Conread position: 54-312
Cow position: chr19:19176802-19177065 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 185
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 11, 39

Conread position: 58-300
Cow position: chr19:34656904-34657145 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 173
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 162, 60

Conread position: 67-311
Cow position: chr19:37683547-37683303 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 41

Conread position: 128-311
Cow position: chr19:2271563-2271753 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 160
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 0

Conread position: 152-311
Cow position: chr19:5898977-5899143 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 145
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 102, 0

Conread position: 1-278
Cow position: chr2:194583-194856 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 32

Conread position: 1-290
Cow position: chr2:5868182-5868478 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 249, 0

Conread position: 1-309
Cow position: chr2:12478136-12478453 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 168

Conread position: 1-309
Cow position: chr2:25744579-25744267 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 151

Conread position: 1-311
Cow position: chr2:169055-169368 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 97

Conread position: 1-311
Cow position: chr2:779296-779611 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 33

Conread position: 1-311
Cow position: chr2:4932065-4932379 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 276, 233

Conread position: 1-311
Cow position: chr2:6004709-6005029 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 0

Conread position: 1-311
Cow position: chr2:9187938-9188244 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 277, 208

Conread position: 1-311
Cow position: chr2:10467723-10467408 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 143

Conread position: 1-311
Cow position: chr2:11685128-11684830 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 0

Conread position: 1-311
Cow position: chr2:16321054-16320744 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 278, 34

Conread position: 1-311
Cow position: chr2:21982633-21982946 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 32

Conread position: 1-311
Cow position: chr2:22080036-22079717 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 35

Conread position: 1-311
Cow position: chr2:24470509-24470828 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 245

Conread position: 1-311
Cow position: chr2:24687803-24687491 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 49

Conread position: 1-311
Cow position: chr2:25886430-25886744 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 250, 199

Conread position: 1-311
Cow position: chr2:29217845-29217526 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 71

Conread position: 1-311
Cow position: chr2:29968110-29967790 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-311
Cow position: chr2:32063924-32064241 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 0

Conread position: 1-311
Cow position: chr2:36982777-36982460 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 0

Conread position: 1-311
Cow position: chr2:39676637-39676954 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 250

Conread position: 1-311
Cow position: chr2:42668582-42668895 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 45

Conread position: 1-311
Cow position: chr2:44057908-44058218 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 74

Conread position: 1-311
Cow position: chr2:44477735-44477418 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 252, 0

Conread position: 1-311
Cow position: chr2:44932897-44933212 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 276, 0

Conread position: 1-311
Cow position: chr2:45212560-45212880 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-311
Cow position: chr2:47183002-47183322 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 0

Conread position: 1-311
Cow position: chr2:50981026-50981340 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 197

Conread position: 1-311
Cow position: chr2:53331928-53331608 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-311
Cow position: chr2:62730650-62730330 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-311
Cow position: chr2:72931956-72932280 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 0

Conread position: 1-311
Cow position: chr2:78764780-78764465 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 169

Conread position: 1-311
Cow position: chr2:80290638-80290958 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-312
Cow position: chr2:245770-246088 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 254, 0

Conread position: 1-384
Cow position: chr2:34490566-34490175 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 277, 164

Conread position: 1-384
Cow position: chr2:36075703-36076099 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 52

Conread position: 1-384
Cow position: chr2:63289798-63290185 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 32

Conread position: 2-305
Cow position: chr2:4725104-4724785 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 227
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 72, 32

Conread position: 2-308
Cow position: chr2:8120827-8120511 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 0

Conread position: 2-310
Cow position: chr2:50079686-50079371 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 252, 0

Conread position: 2-311
Cow position: chr2:974249-974564 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 252, 236

Conread position: 2-311
Cow position: chr2:10184105-10184420 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 252, 81

Conread position: 2-311
Cow position: chr2:12595098-12594782 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 60

Conread position: 2-311
Cow position: chr2:39691977-39691660 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 215
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 73, 134

Conread position: 2-384
Cow position: chr2:11694554-11694154 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 24

Conread position: 3-311
Cow position: chr2:7369797-7369485 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 220

Conread position: 3-311
Cow position: chr2:31455552-31455250 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 73

Conread position: 3-311
Cow position: chr2:71520568-71520876 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 210
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 70, 30

Conread position: 3-370
Cow position: chr2:16310093-16309716 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 42

Conread position: 4-302
Cow position: chr2:49632908-49632606 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 7

Conread position: 4-311
Cow position: chr2:65936101-65936418 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 0

Conread position: 5-311
Cow position: chr2:18160824-18161128 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 230
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 22, 31

Conread position: 6-308
Cow position: chr2:58565608-58565904 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 233
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 24, 103

Conread position: 6-311
Cow position: chr2:32456947-32457254 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 57

Conread position: 13-311
Cow position: chr2:2086046-2086353 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 107

Conread position: 13-311
Cow position: chr2:2182156-2182461 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 238, 0

Conread position: 13-311
Cow position: chr2:12753147-12752839 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 13-311
Cow position: chr2:46908334-46908642 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 13-311
Cow position: chr2:49460699-49461007 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 13-311
Cow position: chr2:49629439-49629131 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 13-311
Cow position: chr2:77858447-77858152 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 21

Conread position: 13-384
Cow position: chr2:57338072-57337674 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 14-311
Cow position: chr2:39424044-39423737 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 0

Conread position: 14-311
Cow position: chr2:41047137-41047444 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 0

Conread position: 14-311
Cow position: chr2:53004088-53004393 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 20

Conread position: 19-311
Cow position: chr2:8733149-8732847 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 0

Conread position: 29-311
Cow position: chr2:10263318-10263606 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 214

Conread position: 35-384
Cow position: chr2:42330753-42331131 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 55

Conread position: 36-311
Cow position: chr2:1433758-1434047 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 210
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 106, 8

Conread position: 38-310
Cow position: chr2:60366710-60366978 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 194
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 241, 19

Conread position: 46-311
Cow position: chr2:52064839-52064564 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 0

Conread position: 51-384
Cow position: chr2:52160789-52161150 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 159

Conread position: 52-311
Cow position: chr2:55482116-55482380 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 0

Conread position: 57-310
Cow position: chr2:67189663-67189401 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 61

Conread position: 63-311
Cow position: chr2:72689669-72689410 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 0

Conread position: 78-310
Cow position: chr2:16902439-16902201 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 45

Conread position: 83-310
Cow position: chr2:66597079-66596842 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 0

Conread position: 85-309
Cow position: chr2:28652075-28652304 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 180
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 162, 21

Conread position: 98-311
Cow position: chr2:8747117-8747339 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 139

Conread position: 121-311
Cow position: chr2:60673818-60674018 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 165
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 98, 0

Conread position: 122-311
Cow position: chr2:26903774-26903970 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 168
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 0

Conread position: 123-311
Cow position: chr2:81259178-81258985 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 153
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 14, 10

Conread position: 124-314
Cow position: chr2:9972691-9972491 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 169
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 0

Conread position: 127-311
Cow position: chr2:8085904-8085710 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 164
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 0

Conread position: 129-311
Cow position: chr2:6640805-6640613 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 158
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 90, 0

Conread position: 154-384
Cow position: chr2:18063544-18063797 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 184
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 65, 204

Conread position: 156-311
Cow position: chr2:363095-363260 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 137
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 63, 0

Conread position: 157-311
Cow position: chr2:34500446-34500610 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 140
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 62, 0

Conread position: 159-311
Cow position: chr2:36048297-36048457 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 131
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 56, 44

Conread position: 174-311
Cow position: chr2:280739-280886 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 127
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 45, 0

Conread position: 174-311
Cow position: chr2:32640897-32640749 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 124
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 45, 0

Conread position: 184-310
Cow position: chr2:12329572-12329442 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 114
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 70, 21

Conread position: 214-311
Cow position: chr2:36471771-36471875 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 90
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 37, 0

Conread position: 216-311
Cow position: chr2:59423419-59423317 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 88
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 35, 0

Conread position: 1-276
Cow position: chr20:28724400-28724134 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 211
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 57, 83

Conread position: 1-280
Cow position: chr20:35844670-35844950 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 27

Conread position: 1-290
Cow position: chr20:12568668-12568966 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 86

Conread position: 1-311
Cow position: chr20:825423-825106 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 193

Conread position: 1-311
Cow position: chr20:5537572-5537256 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 162

Conread position: 1-311
Cow position: chr20:10867141-10867461 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 0

Conread position: 1-311
Cow position: chr20:10922275-10922595 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 158

Conread position: 1-311
Cow position: chr20:12435753-12436070 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 0

Conread position: 1-311
Cow position: chr20:15294611-15294303 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 277, 221

Conread position: 1-311
Cow position: chr20:19440558-19440242 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 254, 97

Conread position: 1-311
Cow position: chr20:23467021-23467340 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 12

Conread position: 1-311
Cow position: chr20:23801535-23801215 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 0

Conread position: 1-311
Cow position: chr20:23805234-23805553 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 151

Conread position: 1-311
Cow position: chr20:25845977-25846290 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 147

Conread position: 1-311
Cow position: chr20:27876125-27875808 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 64

Conread position: 1-311
Cow position: chr20:30578531-30578215 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 49

Conread position: 1-311
Cow position: chr20:30688216-30687898 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 71

Conread position: 2-311
Cow position: chr20:7513985-7513664 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 2-311
Cow position: chr20:13765539-13765221 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 73

Conread position: 2-311
Cow position: chr20:15095260-15095574 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 240

Conread position: 2-383
Cow position: chr20:13500938-13500543 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 27

Conread position: 3-311
Cow position: chr20:27345325-27345622 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 275, 31

Conread position: 4-309
Cow position: chr20:17659106-17659417 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 250, 49

Conread position: 11-277
Cow position: chr20:13954287-13954031 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 187
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 18, 0

Conread position: 13-308
Cow position: chr20:20440320-20440623 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 148

Conread position: 13-310
Cow position: chr20:24542057-24541750 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 13-311
Cow position: chr20:8971260-8971555 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 103

Conread position: 13-311
Cow position: chr20:18093553-18093861 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 13-311
Cow position: chr20:21719200-21718889 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 0

Conread position: 16-311
Cow position: chr20:34459680-34459980 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 64

Conread position: 25-311
Cow position: chr20:7598237-7598528 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 87

Conread position: 37-306
Cow position: chr20:8095374-8095629 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 186
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 215, 16

Conread position: 37-311
Cow position: chr20:19424653-19424381 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 70

Conread position: 43-276
Cow position: chr20:19844392-19844158 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 203

Conread position: 55-311
Cow position: chr20:29757688-29757954 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 0

Conread position: 64-311
Cow position: chr20:28280394-28280139 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 194
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 27, 112

Conread position: 82-308
Cow position: chr20:3677752-3677981 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 161
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 76, 97

Conread position: 83-281
Cow position: chr20:35131461-35131249 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 153
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 71, 0

Conread position: 144-311
Cow position: chr20:21917147-21916970 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 150
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 74, 0

Conread position: 184-312
Cow position: chr20:8214810-8214943 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 114
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 92, 0

Conread position: 1-274
Cow position: chr21:17143432-17143154 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-304
Cow position: chr21:13112637-13112943 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 277, 242

Conread position: 1-309
Cow position: chr21:27286200-27285887 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 240

Conread position: 1-311
Cow position: chr21:1195293-1194981 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 130

Conread position: 1-311
Cow position: chr21:3781542-3781213 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 0

Conread position: 1-311
Cow position: chr21:4078803-4078490 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 277, 242

Conread position: 1-311
Cow position: chr21:5019901-5019582 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 0

Conread position: 1-311
Cow position: chr21:7062914-7063234 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-311
Cow position: chr21:27068205-27068525 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-311
Cow position: chr21:28615073-28614754 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 138

Conread position: 1-311
Cow position: chr21:37373980-37373662 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 33

Conread position: 1-311
Cow position: chr21:44763206-44763520 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 215

Conread position: 1-311
Cow position: chr21:46968927-46969244 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 228
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 136, 41

Conread position: 1-311
Cow position: chr21:46975319-46975623 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 32

Conread position: 2-277
Cow position: chr21:3587305-3587568 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 195
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 150, 33

Conread position: 2-305
Cow position: chr21:34255840-34256148 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 252, 33

Conread position: 2-311
Cow position: chr21:10569447-10569133 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 252, 11

Conread position: 2-311
Cow position: chr21:26401012-26401314 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 252, 124

Conread position: 2-311
Cow position: chr21:30596334-30596653 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 34

Conread position: 2-311
Cow position: chr21:34902632-34902939 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 276, 32

Conread position: 2-311
Cow position: chr21:37039862-37040178 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 294

Conread position: 2-311
Cow position: chr21:41796968-41797287 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 0

Conread position: 2-311
Cow position: chr21:47648090-47647772 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 0

Conread position: 3-311
Cow position: chr21:26699911-26700230 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 0

Conread position: 3-311
Cow position: chr21:32397296-32397615 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 0

Conread position: 13-311
Cow position: chr21:4092077-4091773 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 238, 170

Conread position: 13-311
Cow position: chr21:6966729-6967024 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 241, 35

Conread position: 13-311
Cow position: chr21:11291432-11291125 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 0

Conread position: 14-311
Cow position: chr21:4587244-4587557 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 20

Conread position: 14-311
Cow position: chr21:31513581-31513881 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 19

Conread position: 14-380
Cow position: chr21:27148811-27149206 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 0

Conread position: 15-311
Cow position: chr21:27620756-27621061 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 0

Conread position: 19-311
Cow position: chr21:29002583-29002889 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 228
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 195, 51

Conread position: 20-384
Cow position: chr21:4036982-4036598 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 41

Conread position: 29-311
Cow position: chr21:28853119-28853410 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 17

Conread position: 29-311
Cow position: chr21:38024819-38024534 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 204
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 190, 97

Conread position: 34-311
Cow position: chr21:36978185-36978467 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 92

Conread position: 38-311
Cow position: chr21:28987853-28987579 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 92

Conread position: 63-310
Cow position: chr21:9894843-9894585 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 0

Conread position: 63-311
Cow position: chr21:5011043-5011300 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 192
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 156, 75

Conread position: 75-311
Cow position: chr21:16831062-16830829 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 171
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 144, 56

Conread position: 108-309
Cow position: chr21:27610093-27610304 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 120-265
Cow position: chr21:4448735-4448593 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 117
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 96, 0

Conread position: 128-311
Cow position: chr21:29949336-29949527 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 162
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 91, 72

Conread position: 148-309
Cow position: chr21:7038958-7038787 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 145
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 71, 0

Conread position: 151-310
Cow position: chr21:28258021-28257855 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 137
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 68, 0

Conread position: 174-311
Cow position: chr21:40269089-40269233 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 123
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 80, 0

Conread position: 182-311
Cow position: chr21:19352500-19352361 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 118
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 37, 0

Conread position: 192-311
Cow position: chr21:19613326-19613197 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 107
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 27, 0

Conread position: 209-311
Cow position: chr21:10852765-10852656 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 94
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 45, 0

Conread position: 1-276
Cow position: chr22:25969063-25969332 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 251, 65

Conread position: 1-309
Cow position: chr22:10933643-10933956 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 189

Conread position: 1-309
Cow position: chr22:22956729-22957044 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 0

Conread position: 1-310
Cow position: chr22:28784701-28784382 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-311
Cow position: chr22:558121-558438 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 0

Conread position: 1-311
Cow position: chr22:1708504-1708194 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 86

Conread position: 1-311
Cow position: chr22:2562163-2562499 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 0

Conread position: 1-311
Cow position: chr22:5931504-5931812 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 148

Conread position: 1-311
Cow position: chr22:6334393-6334079 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 183

Conread position: 1-311
Cow position: chr22:7279124-7278810 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 129

Conread position: 1-311
Cow position: chr22:8132206-8132519 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 250, 49

Conread position: 1-311
Cow position: chr22:13767908-13767602 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 277, 155

Conread position: 1-311
Cow position: chr22:17325899-17326218 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-311
Cow position: chr22:18029857-18029537 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 165

Conread position: 1-311
Cow position: chr22:19141107-19141423 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 112

Conread position: 1-311
Cow position: chr22:24818181-24818490 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 27

Conread position: 1-311
Cow position: chr22:28713259-28712942 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 250, 0

Conread position: 1-311
Cow position: chr22:31315124-31314804 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-311
Cow position: chr22:31332291-31332618 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-311
Cow position: chr22:32205642-32205331 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 33

Conread position: 1-311
Cow position: chr22:36858955-36859283 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 0

Conread position: 1-311
Cow position: chr22:37536892-37537210 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 81

Conread position: 1-311
Cow position: chr22:39039396-39039706 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 45

Conread position: 1-311
Cow position: chr22:40372990-40372674 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 146

Conread position: 1-311
Cow position: chr22:42993758-42993439 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 115

Conread position: 1-311
Cow position: chr22:44936525-44936205 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 177

Conread position: 1-311
Cow position: chr22:45280529-45280207 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 0

Conread position: 1-380
Cow position: chr22:44100759-44101152 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 148

Conread position: 2-309
Cow position: chr22:15854018-15853704 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 252, 0

Conread position: 2-311
Cow position: chr22:539713-539397 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 252, 0

Conread position: 2-311
Cow position: chr22:1482995-1482679 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 0

Conread position: 2-311
Cow position: chr22:8118660-8118977 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 87

Conread position: 2-311
Cow position: chr22:18604226-18604534 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 139

Conread position: 2-311
Cow position: chr22:21592006-21591691 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 252, 210

Conread position: 2-311
Cow position: chr22:39466931-39467246 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 252, 154

Conread position: 2-311
Cow position: chr22:43046784-43047090 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 237
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 213, 65

Conread position: 3-311
Cow position: chr22:11802467-11802786 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 0

Conread position: 3-311
Cow position: chr22:13775085-13774776 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 249, 194

Conread position: 6-311
Cow position: chr22:13546331-13546646 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 223
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 35, 39

Conread position: 13-311
Cow position: chr22:10577920-10578224 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 37

Conread position: 13-311
Cow position: chr22:18614845-18614549 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 161

Conread position: 13-311
Cow position: chr22:20238264-20238569 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 238, 0

Conread position: 13-311
Cow position: chr22:21193633-21193937 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 37

Conread position: 13-311
Cow position: chr22:26105573-26105885 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 0

Conread position: 13-311
Cow position: chr22:43235405-43235110 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 241, 64

Conread position: 14-311
Cow position: chr22:28555598-28555905 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 0

Conread position: 14-312
Cow position: chr22:36186197-36185891 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 94

Conread position: 17-310
Cow position: chr22:36544388-36544688 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 83

Conread position: 18-311
Cow position: chr22:17994747-17995047 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 26

Conread position: 18-384
Cow position: chr22:44399001-44398613 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 0

Conread position: 19-299
Cow position: chr22:50604-50313 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 0

Conread position: 35-310
Cow position: chr22:15309409-15309688 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 188

Conread position: 37-311
Cow position: chr22:35918603-35918328 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 238, 168

Conread position: 37-311
Cow position: chr22:35935972-35935712 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 244, 97

Conread position: 43-309
Cow position: chr22:36585301-36585577 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 200
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 177, 0

Conread position: 44-311
Cow position: chr22:14088433-14088707 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 185
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 176, 21

Conread position: 46-311
Cow position: chr22:9274900-9274642 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 191
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 233, 38

Conread position: 63-306
Cow position: chr22:44516642-44516895 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 0

Conread position: 70-311
Cow position: chr22:18842668-18842424 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 170
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 146, 60

Conread position: 82-311
Cow position: chr22:10549145-10548909 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 0

Conread position: 100-311
Cow position: chr22:4248842-4249057 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 159
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 97, 49

Conread position: 133-311
Cow position: chr22:12729240-12729423 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 154
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 21, 117

Conread position: 143-311
Cow position: chr22:11806312-11806485 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 144
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 134, 0

Conread position: 145-311
Cow position: chr22:3515888-3516066 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 148
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 64, 0

Conread position: 176-311
Cow position: chr22:8825921-8826061 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 109
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 78, 45

Conread position: 1-304
Cow position: chr23:14264924-14264613 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-308
Cow position: chr23:5625002-5625306 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 148

Conread position: 1-309
Cow position: chr23:14971371-14971686 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 165

Conread position: 1-311
Cow position: chr23:1049949-1050269 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 52

Conread position: 1-311
Cow position: chr23:2792188-2792502 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 277, 221

Conread position: 1-311
Cow position: chr23:4516117-4515797 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 149

Conread position: 1-311
Cow position: chr23:4891268-4890950 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 71

Conread position: 1-311
Cow position: chr23:7313516-7313836 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-311
Cow position: chr23:11781372-11781053 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 0

Conread position: 1-311
Cow position: chr23:15528163-15527846 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 0

Conread position: 1-311
Cow position: chr23:15568346-15568667 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 0

Conread position: 1-311
Cow position: chr23:16496692-16496990 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 277, 161

Conread position: 1-311
Cow position: chr23:16612223-16612536 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 34

Conread position: 1-311
Cow position: chr23:19492134-19491814 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-311
Cow position: chr23:22144725-22145044 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 109

Conread position: 1-311
Cow position: chr23:25350933-25350613 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-311
Cow position: chr23:29442521-29442834 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 239

Conread position: 1-311
Cow position: chr23:30212267-30212570 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 103

Conread position: 1-311
Cow position: chr23:32009072-32008762 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 276, 45

Conread position: 1-311
Cow position: chr23:36028804-36029124 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-311
Cow position: chr23:36097396-36097076 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-311
Cow position: chr23:37199941-37200258 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 0

Conread position: 1-314
Cow position: chr23:21773336-21773658 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 318

Conread position: 1-370
Cow position: chr23:4308600-4308997 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 0

Conread position: 1-384
Cow position: chr23:2411060-2411456 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 194

Conread position: 2-311
Cow position: chr23:15179643-15179327 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 252, 0

Conread position: 2-311
Cow position: chr23:28221282-28220966 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 252, 0

Conread position: 2-311
Cow position: chr23:35926071-35925771 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 276, 24

Conread position: 2-384
Cow position: chr23:4436230-4435826 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 252, 43

Conread position: 2-384
Cow position: chr23:38580235-38579841 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 276, 182

Conread position: 3-310
Cow position: chr23:16056315-16056021 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 48

Conread position: 3-311
Cow position: chr23:5871988-5872301 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 12

Conread position: 14-311
Cow position: chr23:22169451-22169142 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 0

Conread position: 21-311
Cow position: chr23:1958719-1958422 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 0

Conread position: 44-311
Cow position: chr23:528615-528332 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 0

Conread position: 60-311
Cow position: chr23:19441348-19441606 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 144

Conread position: 63-311
Cow position: chr23:4266328-4266585 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 96

Conread position: 80-311
Cow position: chr23:28305430-28305192 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 156
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 174, 0

Conread position: 96-284
Cow position: chr23:1249243-1249050 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 163
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 0

Conread position: 111-311
Cow position: chr23:30635382-30635580 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 164
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 164

Conread position: 116-311
Cow position: chr23:6222096-6221898 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 151
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 103, 46

Conread position: 117-312
Cow position: chr23:17845346-17845141 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 166
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 132, 0

Conread position: 144-312
Cow position: chr23:31165262-31165084 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 148
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 75, 0

Conread position: 174-311
Cow position: chr23:4638205-4638352 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 119
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 42, 0

Conread position: 178-309
Cow position: chr23:1204943-1204800 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 116
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 19, 0

Conread position: 212-311
Cow position: chr23:21792106-21792212 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 92
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 39, 0

Conread position: 1-309
Cow position: chr24:40467750-40468055 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 249, 56

Conread position: 1-310
Cow position: chr24:7064232-7063915 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 1-311
Cow position: chr24:6326703-6327018 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 250, 32

Conread position: 1-311
Cow position: chr24:6412146-6411827 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 52

Conread position: 1-311
Cow position: chr24:8606995-8606694 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 99

Conread position: 1-311
Cow position: chr24:12333054-12333374 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-311
Cow position: chr24:14195195-14195511 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 250, 233

Conread position: 1-311
Cow position: chr24:14759548-14759231 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 0

Conread position: 1-311
Cow position: chr24:16559637-16559956 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 0

Conread position: 1-311
Cow position: chr24:19467919-19468239 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 33

Conread position: 1-311
Cow position: chr24:19688915-19689230 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 92

Conread position: 1-311
Cow position: chr24:20284679-20284996 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 30

Conread position: 1-311
Cow position: chr24:29189954-29189634 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-311
Cow position: chr24:36724733-36724412 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 16

Conread position: 1-384
Cow position: chr24:11691332-11691740 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 0

Conread position: 1-384
Cow position: chr24:23093377-23093767 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 33

Conread position: 1-384
Cow position: chr24:23096115-23096505 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 33

Conread position: 1-384
Cow position: chr24:39680184-39679805 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 45

Conread position: 2-311
Cow position: chr24:16908003-16907693 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 34

Conread position: 2-376
Cow position: chr24:13300188-13300576 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 16

Conread position: 2-380
Cow position: chr24:6079096-6078701 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 160

Conread position: 3-308
Cow position: chr24:36556914-36557215 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 182

Conread position: 3-310
Cow position: chr24:12203702-12204013 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 32

Conread position: 3-310
Cow position: chr24:28030830-28031130 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 203
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 52, 45

Conread position: 3-311
Cow position: chr24:6657591-6657905 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 251, 209

Conread position: 3-311
Cow position: chr24:12698351-12698670 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 3-384
Cow position: chr24:12911247-12910852 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 280
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 79, 25

Conread position: 13-311
Cow position: chr24:3850223-3849915 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 13-311
Cow position: chr24:6440408-6440100 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 13-311
Cow position: chr24:16081832-16082140 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 13-311
Cow position: chr24:17323348-17323040 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 13-311
Cow position: chr24:19704353-19704049 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 37

Conread position: 13-311
Cow position: chr24:20367021-20366713 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 13-311
Cow position: chr24:21248292-21248600 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 13-311
Cow position: chr24:22818497-22818193 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 216
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 76, 59

Conread position: 13-384
Cow position: chr24:38584491-38584871 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 21

Conread position: 14-311
Cow position: chr24:12088855-12088551 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 239, 0

Conread position: 18-310
Cow position: chr24:14723089-14722796 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 219
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 22, 14

Conread position: 25-311
Cow position: chr24:11150481-11150774 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 229, 0

Conread position: 38-311
Cow position: chr24:31085735-31085446 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 200
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 96, 62

Conread position: 77-311
Cow position: chr24:22973660-22973419 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 0

Conread position: 84-311
Cow position: chr24:6069274-6069511 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 0

Conread position: 87-311
Cow position: chr24:36037633-36037864 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 92-380
Cow position: chr24:14335447-14335131 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 220
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 38, 194

Conread position: 145-311
Cow position: chr24:4413034-4413202 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 142
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 132, 94

Conread position: 171-311
Cow position: chr24:17454633-17454783 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 127
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 48, 0

Conread position: 174-311
Cow position: chr24:17312237-17312373 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 112
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 104, 65

Conread position: 174-312
Cow position: chr24:9072687-9072836 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 119
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 57, 0

Conread position: 228-384
Cow position: chr24:6131216-6131059 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 122
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 20, 91

Conread position: 1-310
Cow position: chr25:18489387-18489067 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 80

Conread position: 1-311
Cow position: chr25:11930185-11930469 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 21

Conread position: 1-311
Cow position: chr25:13959435-13959125 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 126

Conread position: 1-311
Cow position: chr25:18887104-18887427 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 128

Conread position: 1-311
Cow position: chr25:20632257-20631940 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 0

Conread position: 1-311
Cow position: chr25:26281387-26281070 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 254, 0

Conread position: 1-311
Cow position: chr25:26900901-26900584 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 0

Conread position: 1-311
Cow position: chr25:28862234-28861923 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 254, 151

Conread position: 1-311
Cow position: chr25:34344337-34344657 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 0

Conread position: 1-311
Cow position: chr25:34510382-34510698 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 250, 219

Conread position: 1-311
Cow position: chr25:34667368-34667678 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 37

Conread position: 1-384
Cow position: chr25:35626846-35627237 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 16

Conread position: 2-311
Cow position: chr25:13785216-13784898 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 31

Conread position: 2-311
Cow position: chr25:24656069-24656388 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 0

Conread position: 3-280
Cow position: chr25:23360552-23360268 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 22

Conread position: 4-311
Cow position: chr25:17657007-17656703 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 112

Conread position: 13-311
Cow position: chr25:13352323-13352014 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 0

Conread position: 13-311
Cow position: chr25:20772979-20773287 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 0

Conread position: 13-311
Cow position: chr25:34505461-34505768 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 0

Conread position: 14-311
Cow position: chr25:18191037-18191340 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 240, 77

Conread position: 19-311
Cow position: chr25:29359376-29359077 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 235, 0

Conread position: 19-311
Cow position: chr25:30810167-30809886 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 199
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 20, 117

Conread position: 26-311
Cow position: chr25:12700310-12700023 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 228, 9

Conread position: 33-309
Cow position: chr25:18250313-18250609 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 214
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 30, 72

Conread position: 44-309
Cow position: chr25:10136025-10135756 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 90

Conread position: 45-311
Cow position: chr25:25509286-25509018 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 177
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 171, 91

Conread position: 63-311
Cow position: chr25:34674216-34673962 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 7

Conread position: 120-311
Cow position: chr25:12939928-12940126 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 164
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 0

Conread position: 129-309
Cow position: chr25:26354841-26354651 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 153
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 85, 0

Conread position: 174-311
Cow position: chr25:15617222-15617075 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 126
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 45, 0

Conread position: 1-309
Cow position: chr26:9483700-9483387 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 35

Conread position: 1-309
Cow position: chr26:13772309-13772601 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 50

Conread position: 1-311
Cow position: chr26:1349007-1349327 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-311
Cow position: chr26:5677778-5677461 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 0

Conread position: 1-311
Cow position: chr26:6425618-6425298 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-311
Cow position: chr26:6496993-6497301 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 32

Conread position: 1-311
Cow position: chr26:6844893-6845211 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 35

Conread position: 1-311
Cow position: chr26:14365611-14365920 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 49

Conread position: 1-311
Cow position: chr26:14896590-14896270 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-311
Cow position: chr26:17326785-17326469 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 250, 228

Conread position: 1-311
Cow position: chr26:17394272-17394582 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 45

Conread position: 1-311
Cow position: chr26:18856740-18856425 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 247, 46

Conread position: 1-311
Cow position: chr26:19348875-19349191 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 52

Conread position: 1-311
Cow position: chr26:32932898-32933214 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 161

Conread position: 1-319
Cow position: chr26:31793128-31792797 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 2-311
Cow position: chr26:3028004-3028327 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 0

Conread position: 2-311
Cow position: chr26:17429884-17430203 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 0

Conread position: 2-311
Cow position: chr26:18035532-18035218 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 226
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 25, 34

Conread position: 3-311
Cow position: chr26:9841788-9842090 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 8

Conread position: 3-311
Cow position: chr26:21824039-21824348 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 98

Conread position: 13-309
Cow position: chr26:6792814-6792517 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 20

Conread position: 13-311
Cow position: chr26:899012-898704 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 13-311
Cow position: chr26:23889019-23888715 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 239, 62

Conread position: 13-311
Cow position: chr26:28707452-28707759 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 222

Conread position: 13-311
Cow position: chr26:34014303-34013999 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 238, 0

Conread position: 13-311
Cow position: chr26:35561813-35561507 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 94

Conread position: 34-311
Cow position: chr26:8281106-8281371 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 212
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 124, 42

Conread position: 39-311
Cow position: chr26:9114495-9114214 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 0

Conread position: 67-311
Cow position: chr26:30753834-30754088 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 0

Conread position: 174-311
Cow position: chr26:9560073-9560213 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 123
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 103, 81

Conread position: 180-311
Cow position: chr26:3225623-3225764 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 118
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 39, 0

Conread position: 1-309
Cow position: chr27:1535759-1535450 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 13

Conread position: 1-309
Cow position: chr27:15273499-15273813 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 34

Conread position: 1-310
Cow position: chr27:27289075-27288756 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-311
Cow position: chr27:9332321-9332001 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 31

Conread position: 1-311
Cow position: chr27:15034518-15034839 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-311
Cow position: chr27:19524138-19524458 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-311
Cow position: chr27:28294287-28294602 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 35

Conread position: 1-311
Cow position: chr27:30034742-30034422 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 35

Conread position: 1-384
Cow position: chr27:12749607-12749216 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 35

Conread position: 1-384
Cow position: chr27:23318347-23318743 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 33

Conread position: 2-311
Cow position: chr27:3232948-3233264 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 252, 0

Conread position: 2-311
Cow position: chr27:8200380-8200066 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 154

Conread position: 2-311
Cow position: chr27:22797877-22798192 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 48

Conread position: 2-311
Cow position: chr27:24296668-24296987 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 0

Conread position: 2-311
Cow position: chr27:26327635-26327320 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 252, 0

Conread position: 2-370
Cow position: chr27:15374402-15374031 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 262
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 177, 23

Conread position: 3-311
Cow position: chr27:20809987-20809669 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 0

Conread position: 3-311
Cow position: chr27:27729901-27730208 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 275, 26

Conread position: 3-383
Cow position: chr27:166340-166741 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 75

Conread position: 13-310
Cow position: chr27:797045-797349 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 238, 0

Conread position: 13-311
Cow position: chr27:22742824-22743125 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 238, 37

Conread position: 13-311
Cow position: chr27:26599490-26599198 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 68

Conread position: 14-311
Cow position: chr27:25801612-25801919 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 22

Conread position: 24-311
Cow position: chr27:9990660-9990950 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 230, 178

Conread position: 35-311
Cow position: chr27:4981920-4981638 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 0

Conread position: 38-311
Cow position: chr27:8591608-8591322 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 208
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 46, 117

Conread position: 128-311
Cow position: chr27:5985312-5985119 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 158
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 85, 0

Conread position: 182-309
Cow position: chr27:25884507-25884646 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 112
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 32, 0

Conread position: 205-311
Cow position: chr27:1211738-1211625 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 99
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 49, 0

Conread position: 1-306
Cow position: chr28:20410192-20409884 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 210
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 212, 27

Conread position: 1-309
Cow position: chr28:10458608-10458917 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 56

Conread position: 1-311
Cow position: chr28:785286-784973 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 32

Conread position: 1-311
Cow position: chr28:1165265-1165583 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 64

Conread position: 1-311
Cow position: chr28:1215210-1215527 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 0

Conread position: 1-311
Cow position: chr28:5112098-5112415 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 0

Conread position: 1-311
Cow position: chr28:5210742-5210425 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 0

Conread position: 1-311
Cow position: chr28:5940105-5939793 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 45

Conread position: 1-311
Cow position: chr28:7004628-7004309 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 0

Conread position: 1-311
Cow position: chr28:7743762-7743445 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 0

Conread position: 1-311
Cow position: chr28:8381667-8381349 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 33

Conread position: 1-311
Cow position: chr28:9181495-9181176 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 151

Conread position: 1-311
Cow position: chr28:12407593-12407909 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 0

Conread position: 1-311
Cow position: chr28:13462584-13462272 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 276, 222

Conread position: 1-311
Cow position: chr28:15033458-15033778 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 0

Conread position: 1-311
Cow position: chr28:15686027-15685713 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 46

Conread position: 1-311
Cow position: chr28:17391035-17390715 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-311
Cow position: chr28:17664702-17665014 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 184

Conread position: 1-311
Cow position: chr28:18517524-18517842 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 0

Conread position: 1-311
Cow position: chr28:22230708-22231024 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 245

Conread position: 1-311
Cow position: chr28:24885481-24885161 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 0

Conread position: 1-311
Cow position: chr28:29760007-29760322 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 35

Conread position: 1-311
Cow position: chr28:29822808-29822496 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 35

Conread position: 1-311
Cow position: chr28:30097498-30097178 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 0

Conread position: 1-311
Cow position: chr28:30534441-30534761 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 0

Conread position: 1-311
Cow position: chr28:30960234-30959918 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 57

Conread position: 1-311
Cow position: chr28:33639190-33638870 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-311
Cow position: chr28:34596867-34596547 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 0

Conread position: 1-384
Cow position: chr28:2087085-2086684 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 251, 207

Conread position: 1-384
Cow position: chr28:11787975-11788373 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 32

Conread position: 1-384
Cow position: chr28:33254943-33254532 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 0

Conread position: 2-298
Cow position: chr28:13605928-13605623 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 227
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 66, 23

Conread position: 2-311
Cow position: chr28:957507-957192 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 227
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 39, 20

Conread position: 2-311
Cow position: chr28:3189620-3189940 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 0

Conread position: 3-309
Cow position: chr28:21379155-21378842 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 236, 297

Conread position: 3-311
Cow position: chr28:7335608-7335293 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 48

Conread position: 3-311
Cow position: chr28:29037026-29037344 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 0

Conread position: 12-309
Cow position: chr28:7813061-7812772 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 266, 68

Conread position: 13-311
Cow position: chr28:1812330-1812629 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 239, 135

Conread position: 13-311
Cow position: chr28:1955977-1955672 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 37

Conread position: 13-311
Cow position: chr28:2644327-2644019 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 13-311
Cow position: chr28:5636438-5636142 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 264, 226

Conread position: 13-311
Cow position: chr28:10302447-10302146 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 241, 16

Conread position: 13-311
Cow position: chr28:25849022-25849330 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 13-311
Cow position: chr28:34582532-34582224 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 13-384
Cow position: chr28:6536188-6536582 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 21

Conread position: 18-277
Cow position: chr28:22310660-22310403 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 178
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 44, 66

Conread position: 18-311
Cow position: chr28:16596930-16596634 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 259, 37

Conread position: 18-363
Cow position: chr28:22325271-22324924 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 240
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 44, 17

Conread position: 19-311
Cow position: chr28:10579255-10579556 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 16

Conread position: 30-311
Cow position: chr28:7829081-7828802 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 221, 8

Conread position: 37-311
Cow position: chr28:32588444-32588728 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 0

Conread position: 51-309
Cow position: chr28:34083948-34084210 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 122

Conread position: 61-273
Cow position: chr28:17188948-17188738 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 145
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 83, 33

Conread position: 66-311
Cow position: chr28:3013412-3013663 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 30

Conread position: 68-311
Cow position: chr28:22040840-22041089 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 178

Conread position: 79-311
Cow position: chr28:21362029-21361807 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 188
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 175, 84

Conread position: 107-309
Cow position: chr28:13723738-13723543 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 153
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 170, 18

Conread position: 120-311
Cow position: chr28:26423760-26423958 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 162
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 0

Conread position: 157-311
Cow position: chr28:5568615-5568460 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 124
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 120, 66

Conread position: 163-314
Cow position: chr28:6231363-6231520 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 129
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 56, 8

Conread position: 166-311
Cow position: chr28:30806229-30806074 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 132
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 53, 0

Conread position: 184-309
Cow position: chr28:24560352-24560218 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 108
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 35, 27

Conread position: 205-311
Cow position: chr28:3626504-3626393 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 98
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 46, 33

Conread position: 212-311
Cow position: chr28:1460515-1460409 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 92
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 39, 0

Conread position: 1-308
Cow position: chr29:42256390-42256700 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 49

Conread position: 1-309
Cow position: chr29:27977235-27977555 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 49

Conread position: 1-310
Cow position: chr29:26162245-26162563 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 148

Conread position: 1-311
Cow position: chr29:107648-107334 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 251, 43

Conread position: 1-311
Cow position: chr29:408671-408984 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 251, 33

Conread position: 1-311
Cow position: chr29:608042-608356 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 47

Conread position: 1-311
Cow position: chr29:6219208-6219511 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 276, 102

Conread position: 1-311
Cow position: chr29:6263409-6263726 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 250, 0

Conread position: 1-311
Cow position: chr29:6934083-6933768 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 188

Conread position: 1-311
Cow position: chr29:10644820-10645137 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 0

Conread position: 1-311
Cow position: chr29:14500457-14500138 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 115

Conread position: 1-311
Cow position: chr29:15624107-15624431 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 0

Conread position: 1-311
Cow position: chr29:15966962-15967282 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-311
Cow position: chr29:16346797-16346478 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-311
Cow position: chr29:17407730-17407405 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-311
Cow position: chr29:19525698-19526014 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 250, 188

Conread position: 1-311
Cow position: chr29:21430266-21430581 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 49

Conread position: 1-311
Cow position: chr29:23979302-23978980 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 0

Conread position: 1-311
Cow position: chr29:25929927-25930245 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 20

Conread position: 1-311
Cow position: chr29:27260530-27260841 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 211

Conread position: 1-311
Cow position: chr29:32557154-32557474 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-311
Cow position: chr29:35274428-35274748 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-311
Cow position: chr29:43326091-43325786 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 101

Conread position: 1-311
Cow position: chr29:45207103-45206787 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 35

Conread position: 1-311
Cow position: chr29:45625938-45625620 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 47

Conread position: 1-321
Cow position: chr29:45461824-45461495 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 155

Conread position: 1-384
Cow position: chr29:8624605-8625005 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 45

Conread position: 1-384
Cow position: chr29:19620677-19621081 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 14

Conread position: 2-275
Cow position: chr29:2693036-2692765 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 249, 44

Conread position: 2-310
Cow position: chr29:15995789-15996106 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 32

Conread position: 2-311
Cow position: chr29:45870-46184 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 252, 63

Conread position: 2-311
Cow position: chr29:2464280-2464599 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 0

Conread position: 2-311
Cow position: chr29:2838746-2839065 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 0

Conread position: 2-311
Cow position: chr29:4518490-4518176 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 30

Conread position: 2-311
Cow position: chr29:5980133-5980449 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 27

Conread position: 2-311
Cow position: chr29:7428521-7428841 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 0

Conread position: 2-311
Cow position: chr29:19656494-19656175 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 0

Conread position: 2-311
Cow position: chr29:20253756-20253446 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 34

Conread position: 2-311
Cow position: chr29:39077126-39077440 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 252, 31

Conread position: 3-311
Cow position: chr29:529809-530125 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 0

Conread position: 3-311
Cow position: chr29:13057341-13057018 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 81

Conread position: 3-311
Cow position: chr29:28657780-28658098 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 0

Conread position: 3-311
Cow position: chr29:35299510-35299197 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 247

Conread position: 13-286
Cow position: chr29:32514904-32514629 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 65

Conread position: 13-311
Cow position: chr29:5785392-5785084 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 13-311
Cow position: chr29:14208969-14209274 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 241, 0

Conread position: 13-311
Cow position: chr29:15260410-15260718 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 13-311
Cow position: chr29:16689411-16689106 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 55

Conread position: 13-311
Cow position: chr29:31183987-31183679 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 13-311
Cow position: chr29:39424559-39424867 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 14-311
Cow position: chr29:13019266-13018967 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 241, 105

Conread position: 15-311
Cow position: chr29:40470989-40470687 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 236, 67

Conread position: 16-384
Cow position: chr29:34739260-34739636 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 238, 0

Conread position: 19-311
Cow position: chr29:13584789-13584493 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 36

Conread position: 29-311
Cow position: chr29:34333709-34333984 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 205
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 14, 6

Conread position: 37-311
Cow position: chr29:16013729-16014012 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 212
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 115, 11

Conread position: 59-311
Cow position: chr29:17152839-17152600 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 186
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 160, 41

Conread position: 88-311
Cow position: chr29:14082221-14082450 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 180
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 9, 93

Conread position: 108-308
Cow position: chr29:21537078-21536876 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 155
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 143, 83

Conread position: 127-311
Cow position: chr29:14743581-14743775 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 165
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 0

Conread position: 144-311
Cow position: chr29:10021877-10022054 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 151
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 75, 0

Conread position: 154-311
Cow position: chr29:18524281-18524447 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 127
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 65, 51

Conread position: 159-384
Cow position: chr29:32642678-32642428 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 187
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 60, 0

Conread position: 175-311
Cow position: chr29:1477586-1477434 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 121
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 44, 0

Conread position: 178-311
Cow position: chr29:40500598-40500739 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 118
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 41, 11

Conread position: 182-312
Cow position: chr29:5237428-5237288 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 119
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 34, 0

Conread position: 185-311
Cow position: chr29:34797395-34797532 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 108
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 21, 0

Conread position: 192-311
Cow position: chr29:35003015-35003142 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 109
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 21, 114

Conread position: 1-277
Cow position: chr3:80930933-80931208 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 217
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 219, 21

Conread position: 1-309
Cow position: chr3:596626-596321 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 78

Conread position: 1-309
Cow position: chr3:30320769-30320451 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-309
Cow position: chr3:38496283-38495965 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 224

Conread position: 1-310
Cow position: chr3:18113180-18113500 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 0

Conread position: 1-310
Cow position: chr3:34028419-34028736 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 237

Conread position: 1-311
Cow position: chr3:2708365-2708679 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 254, 134

Conread position: 1-311
Cow position: chr3:3059399-3059087 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 129

Conread position: 1-311
Cow position: chr3:3983141-3982821 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 0

Conread position: 1-311
Cow position: chr3:7156210-7156525 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 49

Conread position: 1-311
Cow position: chr3:16225386-16225076 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 50

Conread position: 1-311
Cow position: chr3:18461616-18461924 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 41

Conread position: 1-311
Cow position: chr3:19754456-19754769 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 276, 242

Conread position: 1-311
Cow position: chr3:19798647-19798967 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-311
Cow position: chr3:19882981-19882680 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 236

Conread position: 1-311
Cow position: chr3:24443589-24443909 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-311
Cow position: chr3:24573654-24573958 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 254, 49

Conread position: 1-311
Cow position: chr3:26743366-26743686 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-311
Cow position: chr3:32620536-32620856 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-311
Cow position: chr3:36402099-36401784 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 186

Conread position: 1-311
Cow position: chr3:36689688-36690007 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-311
Cow position: chr3:38869086-38868770 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 250, 0

Conread position: 1-311
Cow position: chr3:39556075-39556399 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 32

Conread position: 1-311
Cow position: chr3:43190765-43191085 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-311
Cow position: chr3:45977007-45976688 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 169

Conread position: 1-311
Cow position: chr3:50124494-50124806 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 16

Conread position: 1-311
Cow position: chr3:50204052-50203726 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-311
Cow position: chr3:53048274-53048598 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 246, 183

Conread position: 1-311
Cow position: chr3:56147812-56147497 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 251, 158

Conread position: 1-311
Cow position: chr3:57482218-57482534 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 267

Conread position: 1-311
Cow position: chr3:57742031-57741718 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 248, 97

Conread position: 1-311
Cow position: chr3:58128582-58128272 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 131

Conread position: 1-311
Cow position: chr3:59864060-59863753 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 276, 27

Conread position: 1-311
Cow position: chr3:64812938-64813258 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 146

Conread position: 1-311
Cow position: chr3:66622721-66622404 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 0

Conread position: 1-311
Cow position: chr3:69931328-69931648 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 0

Conread position: 1-311
Cow position: chr3:72632574-72632258 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 211

Conread position: 1-311
Cow position: chr3:75039340-75039662 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 0

Conread position: 1-311
Cow position: chr3:77426233-77425905 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 234

Conread position: 1-311
Cow position: chr3:78024927-78025247 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 2-277
Cow position: chr3:70889780-70889505 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 203
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 218, 33

Conread position: 2-311
Cow position: chr3:18814011-18813698 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 152

Conread position: 2-311
Cow position: chr3:21004320-21004007 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 114

Conread position: 2-311
Cow position: chr3:23205375-23205693 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 11

Conread position: 2-311
Cow position: chr3:29574616-29574928 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 246, 210

Conread position: 2-311
Cow position: chr3:42151284-42151597 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 48

Conread position: 2-311
Cow position: chr3:42449607-42449300 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 103

Conread position: 2-311
Cow position: chr3:48602757-48602440 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 0

Conread position: 2-311
Cow position: chr3:56337447-56337766 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 0

Conread position: 2-311
Cow position: chr3:63256616-63256301 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 34

Conread position: 3-299
Cow position: chr3:36716140-36716439 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 33

Conread position: 3-309
Cow position: chr3:35885834-35886154 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 31

Conread position: 3-311
Cow position: chr3:7246599-7246919 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 42

Conread position: 3-311
Cow position: chr3:19946746-19946433 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 243

Conread position: 3-311
Cow position: chr3:23009895-23009580 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 251, 0

Conread position: 3-311
Cow position: chr3:37627469-37627152 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 67

Conread position: 3-311
Cow position: chr3:49542698-49543016 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 252

Conread position: 3-384
Cow position: chr3:69963298-69963676 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 251, 170

Conread position: 13-309
Cow position: chr3:1031461-1031162 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 242, 37

Conread position: 13-311
Cow position: chr3:13036183-13035875 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 13-311
Cow position: chr3:19941409-19941115 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 265, 153

Conread position: 13-311
Cow position: chr3:20380221-20380538 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 90

Conread position: 13-311
Cow position: chr3:22725275-22725580 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 242, 0

Conread position: 13-311
Cow position: chr3:30989751-30990059 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 13-311
Cow position: chr3:34504854-34505161 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 97

Conread position: 13-311
Cow position: chr3:41082660-41082359 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 37

Conread position: 13-311
Cow position: chr3:41208102-41208410 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 13-311
Cow position: chr3:49003664-49003356 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 13-311
Cow position: chr3:49734065-49733757 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 13-311
Cow position: chr3:66969387-66969694 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 22

Conread position: 15-311
Cow position: chr3:64653158-64652852 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 0

Conread position: 16-311
Cow position: chr3:22338399-22338107 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 77

Conread position: 19-311
Cow position: chr3:49135073-49135371 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 235, 0

Conread position: 20-308
Cow position: chr3:63239738-63240029 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 14

Conread position: 37-311
Cow position: chr3:14849749-14849476 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 192
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 54, 82

Conread position: 38-275
Cow position: chr3:71175835-71176077 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 168
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 60, 12

Conread position: 43-311
Cow position: chr3:80580898-80580619 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 0

Conread position: 43-384
Cow position: chr3:77366600-77366960 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 252
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 54, 0

Conread position: 44-311
Cow position: chr3:57996580-57996303 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 0

Conread position: 60-311
Cow position: chr3:24637879-24637623 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 38

Conread position: 65-311
Cow position: chr3:49742905-49742649 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 0

Conread position: 70-311
Cow position: chr3:19590273-19590521 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 0

Conread position: 88-311
Cow position: chr3:34040157-34040387 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 141

Conread position: 94-379
Cow position: chr3:36862042-36862352 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 305

Conread position: 118-312
Cow position: chr3:82707134-82707343 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 170
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 83, 0

Conread position: 120-311
Cow position: chr3:21180311-21180509 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 164
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 0

Conread position: 129-311
Cow position: chr3:28670466-28670275 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 156
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 90, 0

Conread position: 142-308
Cow position: chr3:2904670-2904846 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 142
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 74, 0

Conread position: 142-311
Cow position: chr3:37644652-37644477 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 138
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 112, 61

Conread position: 144-311
Cow position: chr3:72573269-72573442 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 133
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 75, 55

Conread position: 149-311
Cow position: chr3:4288441-4288270 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 148
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 70, 21

Conread position: 157-311
Cow position: chr3:64813833-64813994 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 122
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 42, 47

Conread position: 159-311
Cow position: chr3:5951839-5952002 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 131
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 61, 0

Conread position: 160-311
Cow position: chr3:11784197-11784358 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 140
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 48, 0

Conread position: 174-311
Cow position: chr3:2919966-2919812 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 122
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 41, 0

Conread position: 175-306
Cow position: chr3:58035350-58035220 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 113
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 99, 37

Conread position: 178-311
Cow position: chr3:15657211-15657352 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 116
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 41, 27

Conread position: 200-311
Cow position: chr3:70719824-70719703 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 103
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 15, 0

Conread position: 1-311
Cow position: chr4:358194-357886 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 221

Conread position: 1-311
Cow position: chr4:1047941-1048268 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 0

Conread position: 1-311
Cow position: chr4:1928312-1928628 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 142

Conread position: 1-311
Cow position: chr4:2350406-2350726 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 0

Conread position: 1-311
Cow position: chr4:3069239-3068934 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 276, 45

Conread position: 1-311
Cow position: chr4:3449106-3448783 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 101

Conread position: 1-311
Cow position: chr4:4378704-4378382 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 246, 0

Conread position: 1-311
Cow position: chr4:6266902-6267222 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-311
Cow position: chr4:6488059-6488373 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 34

Conread position: 1-311
Cow position: chr4:9797931-9798244 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 76

Conread position: 1-311
Cow position: chr4:14141428-14141110 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 125

Conread position: 1-311
Cow position: chr4:16362515-16362199 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 52

Conread position: 1-311
Cow position: chr4:16640922-16640605 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 0

Conread position: 1-311
Cow position: chr4:18815289-18815605 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 164

Conread position: 1-311
Cow position: chr4:23305029-23305337 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 35

Conread position: 1-311
Cow position: chr4:25597176-25597492 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 34

Conread position: 1-311
Cow position: chr4:35306503-35306813 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 67

Conread position: 1-311
Cow position: chr4:36898691-36898373 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 240

Conread position: 1-311
Cow position: chr4:41977336-41977645 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 35

Conread position: 1-311
Cow position: chr4:42406933-42406616 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 250, 0

Conread position: 1-311
Cow position: chr4:43317337-43317657 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-311
Cow position: chr4:43883426-43883107 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 151

Conread position: 1-311
Cow position: chr4:48029172-48028855 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 0

Conread position: 1-311
Cow position: chr4:57986330-57986010 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-311
Cow position: chr4:67683507-67683190 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 0

Conread position: 1-312
Cow position: chr4:47751658-47751341 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 264

Conread position: 1-366
Cow position: chr4:64799366-64798991 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 45

Conread position: 1-380
Cow position: chr4:15815184-15815584 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 64

Conread position: 1-384
Cow position: chr4:5611682-5612092 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-384
Cow position: chr4:34182393-34182792 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 87

Conread position: 2-311
Cow position: chr4:10883844-10883533 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 32

Conread position: 2-311
Cow position: chr4:46712287-46712601 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 249, 51

Conread position: 2-311
Cow position: chr4:54189002-54188684 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 149

Conread position: 2-311
Cow position: chr4:55510535-55510847 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 148

Conread position: 2-311
Cow position: chr4:61241591-61241278 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 44

Conread position: 2-312
Cow position: chr4:67382596-67382282 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 252, 182

Conread position: 2-384
Cow position: chr4:161477-161072 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 171

Conread position: 3-311
Cow position: chr4:11108762-11109071 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 84

Conread position: 3-311
Cow position: chr4:16061590-16061272 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 0

Conread position: 12-311
Cow position: chr4:10055248-10054950 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 22

Conread position: 13-304
Cow position: chr4:532182-531881 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 13-311
Cow position: chr4:3128120-3127812 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 13-311
Cow position: chr4:17923657-17923965 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 0

Conread position: 13-311
Cow position: chr4:18336648-18336956 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 13-311
Cow position: chr4:21574061-21573760 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 239, 37

Conread position: 13-311
Cow position: chr4:32214474-32214170 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 180

Conread position: 13-311
Cow position: chr4:33021328-33021636 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 13-311
Cow position: chr4:41473543-41473847 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 238, 199

Conread position: 13-311
Cow position: chr4:58622227-58622535 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 15-311
Cow position: chr4:27336234-27335928 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 0

Conread position: 17-310
Cow position: chr4:43414206-43413909 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 200
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 14, 19

Conread position: 17-311
Cow position: chr4:11391194-11391481 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 12

Conread position: 17-311
Cow position: chr4:19095991-19095696 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 216
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 203, 27

Conread position: 19-309
Cow position: chr4:34176690-34176990 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 0

Conread position: 19-311
Cow position: chr4:15459112-15459414 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 0

Conread position: 29-311
Cow position: chr4:5442246-5442535 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 0

Conread position: 38-309
Cow position: chr4:50976868-50976599 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 239, 95

Conread position: 38-311
Cow position: chr4:25736990-25736716 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 97

Conread position: 38-384
Cow position: chr4:20605924-20605554 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 265
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 111, 49

Conread position: 42-309
Cow position: chr4:42968824-42969101 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 197
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 21, 79

Conread position: 65-311
Cow position: chr4:54971693-54971442 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 189
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 15, 178

Conread position: 106-311
Cow position: chr4:31563013-31563224 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 195

Conread position: 144-311
Cow position: chr4:30473382-30473208 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 153
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 0

Conread position: 174-311
Cow position: chr4:13495462-13495325 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 118
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 37, 67

Conread position: 179-370
Cow position: chr4:60262045-60262258 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 163
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 40, 0

Conread position: 1-310
Cow position: chr5:48806039-48806343 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 254

Conread position: 1-311
Cow position: chr5:444931-444615 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 49

Conread position: 1-311
Cow position: chr5:1339511-1339829 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 33

Conread position: 1-311
Cow position: chr5:3788638-3788318 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 0

Conread position: 1-311
Cow position: chr5:3966847-3966529 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 50

Conread position: 1-311
Cow position: chr5:4963962-4964277 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 204

Conread position: 1-311
Cow position: chr5:6152480-6152796 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 177

Conread position: 1-311
Cow position: chr5:7276244-7275924 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-311
Cow position: chr5:18120062-18120382 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 0

Conread position: 1-311
Cow position: chr5:21523394-21523721 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 0

Conread position: 1-311
Cow position: chr5:23957916-23958233 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 49

Conread position: 1-311
Cow position: chr5:29031684-29031364 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-311
Cow position: chr5:34698896-34698577 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 0

Conread position: 1-311
Cow position: chr5:44709969-44710289 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 0

Conread position: 1-311
Cow position: chr5:45180682-45180999 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 0

Conread position: 1-311
Cow position: chr5:45702732-45702415 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 0

Conread position: 1-311
Cow position: chr5:46649556-46649235 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 32

Conread position: 1-311
Cow position: chr5:46666419-46666098 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 0

Conread position: 1-311
Cow position: chr5:46735869-46736186 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 0

Conread position: 1-311
Cow position: chr5:46792262-46791942 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-311
Cow position: chr5:48226163-48226478 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 99

Conread position: 1-311
Cow position: chr5:49117931-49118242 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 277, 245

Conread position: 1-311
Cow position: chr5:49521129-49520808 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 61

Conread position: 1-311
Cow position: chr5:58244410-58244727 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 51

Conread position: 1-311
Cow position: chr5:59063053-59062735 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 54

Conread position: 1-311
Cow position: chr5:68593182-68592871 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 194

Conread position: 1-311
Cow position: chr5:73486510-73486830 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 0

Conread position: 1-370
Cow position: chr5:4353017-4352653 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 276
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 218, 71

Conread position: 1-370
Cow position: chr5:54786697-54787099 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 0

Conread position: 1-380
Cow position: chr5:37423559-37423179 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 27

Conread position: 1-384
Cow position: chr5:5925550-5925961 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-384
Cow position: chr5:7141691-7142080 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 251, 97

Conread position: 1-384
Cow position: chr5:26405133-26405530 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 276
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 10, 17

Conread position: 1-384
Cow position: chr5:31120796-31121200 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 62

Conread position: 2-277
Cow position: chr5:24153039-24152771 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 2-285
Cow position: chr5:14877710-14877984 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 200
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 48, 90

Conread position: 2-311
Cow position: chr5:3501718-3502030 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 252, 44

Conread position: 2-311
Cow position: chr5:10921253-10920938 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 90

Conread position: 2-311
Cow position: chr5:12133003-12132694 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 238, 93

Conread position: 2-311
Cow position: chr5:25929276-25929594 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 35

Conread position: 2-311
Cow position: chr5:51745631-51745324 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 252, 46

Conread position: 2-311
Cow position: chr5:64779594-64779913 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 0

Conread position: 3-311
Cow position: chr5:10854407-10854723 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 0

Conread position: 3-311
Cow position: chr5:49222086-49222405 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 51

Conread position: 4-311
Cow position: chr5:41979892-41979600 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 30

Conread position: 13-311
Cow position: chr5:5105623-5105319 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 184

Conread position: 13-311
Cow position: chr5:11922727-11923035 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 13-311
Cow position: chr5:14543902-14544207 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 246

Conread position: 13-311
Cow position: chr5:47827924-47828226 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 236

Conread position: 13-311
Cow position: chr5:50390720-50391013 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 143

Conread position: 13-311
Cow position: chr5:59145773-59145464 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 0

Conread position: 13-384
Cow position: chr5:37379492-37379139 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 103

Conread position: 14-311
Cow position: chr5:12730312-12730619 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 0

Conread position: 14-370
Cow position: chr5:4387619-4387249 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 234, 111

Conread position: 14-384
Cow position: chr5:27196682-27197076 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 343

Conread position: 23-311
Cow position: chr5:12641051-12641350 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 229, 0

Conread position: 29-310
Cow position: chr5:4755796-4756083 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 21

Conread position: 29-384
Cow position: chr5:34299255-34298890 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 262
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 191, 87

Conread position: 36-311
Cow position: chr5:38267697-38267981 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 200
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 80, 119

Conread position: 37-310
Cow position: chr5:57001878-57001596 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 274

Conread position: 37-311
Cow position: chr5:35496553-35496270 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 0

Conread position: 53-310
Cow position: chr5:40932582-40932307 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 207
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 6, 79

Conread position: 54-309
Cow position: chr5:5439772-5439515 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 186
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 29, 49

Conread position: 55-311
Cow position: chr5:30567633-30567367 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 0

Conread position: 57-311
Cow position: chr5:68591088-68590827 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 186
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 91, 149

Conread position: 65-384
Cow position: chr5:2916776-2916437 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 0

Conread position: 67-311
Cow position: chr5:41525207-41525451 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 191
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 141, 26

Conread position: 88-312
Cow position: chr5:40130266-40130500 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 0

Conread position: 93-311
Cow position: chr5:52436325-52436099 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 180
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 127, 50

Conread position: 122-311
Cow position: chr5:4683507-4683706 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 164
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 93, 0

Conread position: 127-277
Cow position: chr5:27655035-27654883 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 114
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 92, 15

Conread position: 133-311
Cow position: chr5:55993161-55993345 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 153
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 121, 53

Conread position: 144-310
Cow position: chr5:4016820-4016992 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 145
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 67, 0

Conread position: 144-311
Cow position: chr5:47358988-47358814 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 137
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 74, 0

Conread position: 152-311
Cow position: chr5:41066442-41066273 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 139
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 67, 0

Conread position: 154-311
Cow position: chr5:13407858-13407690 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 140
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 7, 0

Conread position: 158-311
Cow position: chr5:23846861-23847025 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 133
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 22, 0

Conread position: 165-311
Cow position: chr5:9056910-9056754 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 133
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 54, 0

Conread position: 172-311
Cow position: chr5:280433-280285 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 123
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 47, 13

Conread position: 174-311
Cow position: chr5:414624-414776 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 118
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 45, 0

Conread position: 174-311
Cow position: chr5:24296844-24296701 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 124
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 69, 0

Conread position: 174-311
Cow position: chr5:59284547-59284400 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 116
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 42, 0

Conread position: 179-380
Cow position: chr5:32953320-32953106 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 165
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 73, 55

Conread position: 1-309
Cow position: chr6:478097-477778 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 33

Conread position: 1-309
Cow position: chr6:1536257-1535934 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 0

Conread position: 1-309
Cow position: chr6:7138786-7139100 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 49

Conread position: 1-309
Cow position: chr6:30272338-30272656 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-309
Cow position: chr6:41676488-41676172 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 43

Conread position: 1-310
Cow position: chr6:916594-916275 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-310
Cow position: chr6:1820077-1820390 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 276, 147

Conread position: 1-310
Cow position: chr6:25361840-25361529 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 228
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 218, 31

Conread position: 1-310
Cow position: chr6:36530836-36530521 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 251, 219

Conread position: 1-310
Cow position: chr6:59595801-59595489 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 92

Conread position: 1-311
Cow position: chr6:49023-49341 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 240

Conread position: 1-311
Cow position: chr6:182993-183308 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 241, 200

Conread position: 1-311
Cow position: chr6:704767-704446 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 0

Conread position: 1-311
Cow position: chr6:1106679-1106996 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 161

Conread position: 1-311
Cow position: chr6:1275444-1275763 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 0

Conread position: 1-311
Cow position: chr6:3886957-3887277 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-311
Cow position: chr6:5947226-5947550 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 0

Conread position: 1-311
Cow position: chr6:6094783-6094468 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 49

Conread position: 1-311
Cow position: chr6:8204729-8204411 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 0

Conread position: 1-311
Cow position: chr6:10043764-10043448 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 49

Conread position: 1-311
Cow position: chr6:12663764-12664084 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-311
Cow position: chr6:14133194-14133513 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 34

Conread position: 1-311
Cow position: chr6:14928010-14927693 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 252, 0

Conread position: 1-311
Cow position: chr6:16767285-16767606 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 166

Conread position: 1-311
Cow position: chr6:20557400-20557713 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 276, 205

Conread position: 1-311
Cow position: chr6:28186284-28186604 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-311
Cow position: chr6:32001739-32002047 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 246, 34

Conread position: 1-311
Cow position: chr6:37478771-37478455 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 115

Conread position: 1-311
Cow position: chr6:38874109-38874426 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 0

Conread position: 1-311
Cow position: chr6:39331981-39332296 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 33

Conread position: 1-311
Cow position: chr6:40277617-40277304 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 47

Conread position: 1-311
Cow position: chr6:40864480-40864796 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 212

Conread position: 1-311
Cow position: chr6:43777803-43777493 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 276, 12

Conread position: 1-311
Cow position: chr6:43791023-43791349 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 0

Conread position: 1-311
Cow position: chr6:44018280-44018596 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 61

Conread position: 1-311
Cow position: chr6:45902336-45902656 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-311
Cow position: chr6:45936810-45936497 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 250, 49

Conread position: 1-311
Cow position: chr6:47040649-47040956 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 87

Conread position: 1-311
Cow position: chr6:50486245-50486565 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-311
Cow position: chr6:51091916-51091593 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 0

Conread position: 1-311
Cow position: chr6:51732631-51732314 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 0

Conread position: 1-311
Cow position: chr6:55539720-55540040 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 0

Conread position: 1-311
Cow position: chr6:61052545-61052865 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-383
Cow position: chr6:50112652-50112249 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 210

Conread position: 1-384
Cow position: chr6:28278155-28277763 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 175

Conread position: 1-384
Cow position: chr6:40974735-40974326 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 33

Conread position: 2-278
Cow position: chr6:6162686-6162407 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 209
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 38, 136

Conread position: 2-308
Cow position: chr6:51717094-51716778 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 0

Conread position: 2-309
Cow position: chr6:29479543-29479222 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 219

Conread position: 2-311
Cow position: chr6:3485850-3486165 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 48

Conread position: 2-311
Cow position: chr6:11722646-11722965 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 0

Conread position: 2-311
Cow position: chr6:35874161-35874479 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 199

Conread position: 2-355
Cow position: chr6:39435373-39435751 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 114

Conread position: 2-378
Cow position: chr6:27527438-27527830 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 354

Conread position: 3-311
Cow position: chr6:13849623-13849307 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 26

Conread position: 3-311
Cow position: chr6:15138619-15138936 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 0

Conread position: 3-311
Cow position: chr6:15925023-15925330 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 229
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 210, 13

Conread position: 3-380
Cow position: chr6:16624365-16623988 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 274
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 248, 26

Conread position: 4-384
Cow position: chr6:63705110-63705487 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 63

Conread position: 13-276
Cow position: chr6:28064528-28064267 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 79

Conread position: 13-309
Cow position: chr6:34505507-34505810 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 49

Conread position: 13-309
Cow position: chr6:43620268-43619970 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 34

Conread position: 13-310
Cow position: chr6:16050753-16051058 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 68

Conread position: 13-311
Cow position: chr6:328822-329126 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 181

Conread position: 13-311
Cow position: chr6:2377241-2376939 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 233

Conread position: 13-311
Cow position: chr6:11870394-11870698 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 35

Conread position: 13-311
Cow position: chr6:13308848-13309152 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 37

Conread position: 13-311
Cow position: chr6:16592510-16592205 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 241, 0

Conread position: 13-311
Cow position: chr6:18514075-18513787 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 238, 33

Conread position: 13-311
Cow position: chr6:20351552-20351860 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 13-311
Cow position: chr6:34128994-34128692 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 240, 21

Conread position: 13-311
Cow position: chr6:34492692-34492386 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 49

Conread position: 13-311
Cow position: chr6:37387119-37386814 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 238, 0

Conread position: 13-311
Cow position: chr6:39911865-39911557 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 13-311
Cow position: chr6:40318123-40317815 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 20

Conread position: 13-311
Cow position: chr6:46296810-46296504 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 0

Conread position: 13-311
Cow position: chr6:51149479-51149171 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 221

Conread position: 13-311
Cow position: chr6:53544637-53544330 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 22

Conread position: 13-311
Cow position: chr6:55238232-55237924 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 13-311
Cow position: chr6:62577645-62577952 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 0

Conread position: 13-311
Cow position: chr6:62664313-62664012 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 241, 200

Conread position: 13-311
Cow position: chr6:65929785-65929472 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 13-380
Cow position: chr6:33465503-33465117 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 264, 199

Conread position: 13-384
Cow position: chr6:27474951-27474573 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 241, 36

Conread position: 14-311
Cow position: chr6:67553017-67552714 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 36

Conread position: 18-309
Cow position: chr6:3757268-3756970 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 236, 0

Conread position: 19-311
Cow position: chr6:1408120-1408417 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 31

Conread position: 24-311
Cow position: chr6:10611367-10611072 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 224
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 92, 74

Conread position: 25-311
Cow position: chr6:25216829-25216535 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 0

Conread position: 37-311
Cow position: chr6:44148037-44148321 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 0

Conread position: 39-311
Cow position: chr6:31586749-31587031 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 0

Conread position: 48-311
Cow position: chr6:33810142-33809869 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 0

Conread position: 56-311
Cow position: chr6:40552089-40552344 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 221, 20

Conread position: 99-311
Cow position: chr6:65844074-65843844 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 176
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 110, 0

Conread position: 110-269
Cow position: chr6:9734672-9734827 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 122
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 101, 0

Conread position: 146-311
Cow position: chr6:15895389-15895560 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 134
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 106, 76

Conread position: 147-311
Cow position: chr6:40000083-40000253 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 147
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 104, 0

Conread position: 159-311
Cow position: chr6:13758117-13757955 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 138
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 60, 0

Conread position: 168-311
Cow position: chr6:32633205-32633052 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 123
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 22, 12

Conread position: 175-311
Cow position: chr6:3274643-3274785 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 121
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 78, 92

Conread position: 176-337
Cow position: chr6:43800858-43801025 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 135
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 43, 135

Conread position: 192-311
Cow position: chr6:46479490-46479361 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 109
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 27, 0

Conread position: 1-276
Cow position: chr7:66011258-66010983 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 126

Conread position: 1-277
Cow position: chr7:62393157-62392888 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 191
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 41, 77

Conread position: 1-283
Cow position: chr7:22346395-22346109 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 236

Conread position: 1-299
Cow position: chr7:21125029-21125345 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 92

Conread position: 1-307
Cow position: chr7:3122519-3122207 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 33

Conread position: 1-308
Cow position: chr7:34488557-34488243 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 78

Conread position: 1-309
Cow position: chr7:29473085-29472780 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 250, 40

Conread position: 1-309
Cow position: chr7:39596695-39597008 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 57

Conread position: 1-310
Cow position: chr7:33066070-33066381 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 75

Conread position: 1-310
Cow position: chr7:39095847-39096166 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 15

Conread position: 1-310
Cow position: chr7:42225154-42225471 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 0

Conread position: 1-311
Cow position: chr7:195257-195577 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-311
Cow position: chr7:443617-443936 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 161

Conread position: 1-311
Cow position: chr7:547489-547179 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 49

Conread position: 1-311
Cow position: chr7:1368054-1368358 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 113

Conread position: 1-311
Cow position: chr7:6626733-6627052 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 105

Conread position: 1-311
Cow position: chr7:8142331-8142647 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 250, 0

Conread position: 1-311
Cow position: chr7:10428780-10429098 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 0

Conread position: 1-311
Cow position: chr7:11420939-11421257 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 151

Conread position: 1-311
Cow position: chr7:13531264-13531581 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 0

Conread position: 1-311
Cow position: chr7:20558425-20558105 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 0

Conread position: 1-311
Cow position: chr7:21232365-21232680 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 33

Conread position: 1-311
Cow position: chr7:21989276-21988958 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 248, 0

Conread position: 1-311
Cow position: chr7:27099629-27099949 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 0

Conread position: 1-311
Cow position: chr7:37165503-37165191 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 16

Conread position: 1-311
Cow position: chr7:39132190-39132506 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 252, 45

Conread position: 1-311
Cow position: chr7:39552701-39553008 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 32

Conread position: 1-311
Cow position: chr7:45953356-45953029 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 133

Conread position: 1-311
Cow position: chr7:46265805-46265489 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 49

Conread position: 1-311
Cow position: chr7:47191100-47191414 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 135

Conread position: 1-311
Cow position: chr7:51016874-51016569 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 277, 16

Conread position: 1-311
Cow position: chr7:57025413-57025721 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 52

Conread position: 1-311
Cow position: chr7:58336381-58336698 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 250, 0

Conread position: 1-311
Cow position: chr7:60465361-60465041 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-311
Cow position: chr7:66572370-66572681 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 232
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 64, 121

Conread position: 1-311
Cow position: chr7:66907894-66907573 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 176

Conread position: 1-311
Cow position: chr7:68234974-68234666 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 252

Conread position: 1-312
Cow position: chr7:34151587-34151267 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 34

Conread position: 1-312
Cow position: chr7:34414414-34414733 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 35

Conread position: 1-314
Cow position: chr7:27107114-27107435 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 0

Conread position: 1-349
Cow position: chr7:27578291-27578643 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 32

Conread position: 1-370
Cow position: chr7:42297648-42298023 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 247, 33

Conread position: 1-383
Cow position: chr7:27712042-27711662 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 35

Conread position: 1-384
Cow position: chr7:60727815-60728220 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 35

Conread position: 2-305
Cow position: chr7:34667552-34667249 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 235
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 28, 34

Conread position: 2-306
Cow position: chr7:19044568-19044881 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 43

Conread position: 2-309
Cow position: chr7:58920590-58920270 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 140

Conread position: 2-311
Cow position: chr7:736107-736424 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 121

Conread position: 2-311
Cow position: chr7:27458092-27458411 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 0

Conread position: 2-311
Cow position: chr7:42302822-42303129 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 252, 32

Conread position: 2-311
Cow position: chr7:62990122-62990436 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 32

Conread position: 2-311
Cow position: chr7:64246958-64247275 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 210

Conread position: 2-311
Cow position: chr7:68897284-68896970 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 224
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 150, 25

Conread position: 2-358
Cow position: chr7:1722507-1722872 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 32

Conread position: 2-384
Cow position: chr7:26837057-26836661 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 249, 198

Conread position: 2-384
Cow position: chr7:39144503-39144123 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 276, 90

Conread position: 2-384
Cow position: chr7:49827707-49828103 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 58

Conread position: 3-310
Cow position: chr7:55039838-55040156 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 0

Conread position: 3-311
Cow position: chr7:11461488-11461807 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 0

Conread position: 3-311
Cow position: chr7:58349403-58349716 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 232
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 100, 56

Conread position: 3-311
Cow position: chr7:64352369-64352054 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 31

Conread position: 3-384
Cow position: chr7:5260298-5260700 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 0

Conread position: 4-384
Cow position: chr7:61624036-61624432 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 88

Conread position: 11-311
Cow position: chr7:21314521-21314221 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 25

Conread position: 11-311
Cow position: chr7:24932926-24933233 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 242, 0

Conread position: 13-311
Cow position: chr7:3298039-3298349 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 13-311
Cow position: chr7:20151087-20151391 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 37

Conread position: 13-311
Cow position: chr7:25442401-25442105 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 35

Conread position: 13-311
Cow position: chr7:45170168-45169860 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 0

Conread position: 13-311
Cow position: chr7:49603940-49604248 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 13-311
Cow position: chr7:64354647-64354340 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 290

Conread position: 13-311
Cow position: chr7:65557790-65558094 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 238, 37

Conread position: 14-311
Cow position: chr7:113245-112935 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 193

Conread position: 14-311
Cow position: chr7:28087697-28087417 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 232
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 203, 20

Conread position: 14-311
Cow position: chr7:52408167-52407863 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 35

Conread position: 16-311
Cow position: chr7:29363842-29364132 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 262, 76

Conread position: 17-311
Cow position: chr7:6801821-6801521 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 114

Conread position: 18-277
Cow position: chr7:18855793-18855534 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 200
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 19, 116

Conread position: 18-311
Cow position: chr7:38146097-38146406 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 16

Conread position: 19-311
Cow position: chr7:41873644-41873940 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 227

Conread position: 19-311
Cow position: chr7:63388643-63388354 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 235, 29

Conread position: 29-309
Cow position: chr7:67496840-67496554 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 6

Conread position: 37-311
Cow position: chr7:21322848-21322567 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 0

Conread position: 37-312
Cow position: chr7:33403275-33403560 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 0

Conread position: 44-311
Cow position: chr7:38399415-38399143 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 20

Conread position: 46-311
Cow position: chr7:20062071-20061800 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 200

Conread position: 54-310
Cow position: chr7:26160010-26160271 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 194
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 58, 77

Conread position: 73-311
Cow position: chr7:41493419-41493171 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 0

Conread position: 73-311
Cow position: chr7:46900019-46900267 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 0

Conread position: 112-311
Cow position: chr7:20785505-20785305 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 156
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 122, 104

Conread position: 119-311
Cow position: chr7:43395651-43395851 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 166
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 0

Conread position: 140-311
Cow position: chr7:3321631-3321812 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 150
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 79, 0

Conread position: 143-311
Cow position: chr7:56823219-56823043 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 140
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 76, 0

Conread position: 144-309
Cow position: chr7:24744170-24744346 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 132
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 78, 0

Conread position: 155-311
Cow position: chr7:3127829-3127666 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 139
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 99, 0

Conread position: 157-379
Cow position: chr7:38962215-38962449 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 167
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 62, 24

Conread position: 174-311
Cow position: chr7:42427317-42427170 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 123
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 45, 0

Conread position: 174-311
Cow position: chr7:45946677-45946824 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 124
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 45, 0

Conread position: 177-311
Cow position: chr7:62607855-62607998 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 125
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 34, 0

Conread position: 187-370
Cow position: chr7:54853643-54853446 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 148
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 32, 59

Conread position: 202-311
Cow position: chr7:30300862-30300981 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 101
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 17, 0

Conread position: 1-309
Cow position: chr8:27154304-27154621 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 199

Conread position: 1-309
Cow position: chr8:49219770-49219451 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 35

Conread position: 1-310
Cow position: chr8:21252068-21251752 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 250, 0

Conread position: 1-311
Cow position: chr8:1934861-1935174 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 276, 187

Conread position: 1-311
Cow position: chr8:3333858-3333535 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 272

Conread position: 1-311
Cow position: chr8:4689227-4688907 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 0

Conread position: 1-311
Cow position: chr8:8399290-8399591 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 35

Conread position: 1-311
Cow position: chr8:8515256-8515576 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-311
Cow position: chr8:12312059-12312372 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 276, 242

Conread position: 1-311
Cow position: chr8:14589048-14589363 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 45

Conread position: 1-311
Cow position: chr8:14630402-14630722 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-311
Cow position: chr8:14926061-14926370 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 102

Conread position: 1-311
Cow position: chr8:18403503-18403820 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 148

Conread position: 1-311
Cow position: chr8:23773462-23773145 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 97

Conread position: 1-311
Cow position: chr8:24913463-24913779 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 32

Conread position: 1-311
Cow position: chr8:29922540-29922835 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 254, 92

Conread position: 1-311
Cow position: chr8:34399378-34399071 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 276, 46

Conread position: 1-311
Cow position: chr8:35128969-35129289 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 50

Conread position: 1-311
Cow position: chr8:35472124-35471813 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 193

Conread position: 1-311
Cow position: chr8:42486734-42486419 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 105

Conread position: 1-311
Cow position: chr8:47489386-47489691 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 139

Conread position: 1-311
Cow position: chr8:47659493-47659809 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 0

Conread position: 1-311
Cow position: chr8:49285235-49285555 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-311
Cow position: chr8:50928278-50928591 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 276, 242

Conread position: 1-311
Cow position: chr8:59260114-59260432 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 213

Conread position: 1-370
Cow position: chr8:8228574-8228956 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 33

Conread position: 1-370
Cow position: chr8:55087367-55086979 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 137

Conread position: 1-378
Cow position: chr8:32316757-32317142 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 350

Conread position: 1-380
Cow position: chr8:46059138-46059530 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 250, 32

Conread position: 1-384
Cow position: chr8:12451880-12451464 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 2-309
Cow position: chr8:5019838-5019521 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 0

Conread position: 2-309
Cow position: chr8:51701152-51700835 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 115

Conread position: 2-310
Cow position: chr8:2167692-2168006 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 244

Conread position: 2-310
Cow position: chr8:58183811-58184120 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 95

Conread position: 2-311
Cow position: chr8:4273097-4272784 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 81

Conread position: 2-311
Cow position: chr8:20090773-20091096 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 264

Conread position: 2-311
Cow position: chr8:38044306-38044622 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 0

Conread position: 2-311
Cow position: chr8:38393459-38393140 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 0

Conread position: 2-311
Cow position: chr8:38589530-38589840 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 32

Conread position: 2-311
Cow position: chr8:39193091-39193410 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 0

Conread position: 2-311
Cow position: chr8:44240866-44241179 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 114

Conread position: 2-311
Cow position: chr8:45792923-45793242 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 0

Conread position: 2-311
Cow position: chr8:47675666-47675350 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 165

Conread position: 2-311
Cow position: chr8:47888687-47888360 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 0

Conread position: 2-325
Cow position: chr8:6492675-6492995 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 222
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 54, 16

Conread position: 2-384
Cow position: chr8:33591185-33590800 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 252, 44

Conread position: 3-276
Cow position: chr8:32629186-32629460 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 116

Conread position: 3-308
Cow position: chr8:41741295-41740992 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 213
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 249, 25

Conread position: 3-311
Cow position: chr8:3226076-3226378 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 221
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 24, 35

Conread position: 3-311
Cow position: chr8:46801086-46801407 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 0

Conread position: 6-311
Cow position: chr8:11777476-11777170 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 246, 23

Conread position: 13-311
Cow position: chr8:1151469-1151762 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 265, 109

Conread position: 13-311
Cow position: chr8:12446593-12446893 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 265, 143

Conread position: 13-311
Cow position: chr8:17382299-17382604 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 238, 0

Conread position: 13-311
Cow position: chr8:21154533-21154837 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 37

Conread position: 13-311
Cow position: chr8:29628797-29629105 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 0

Conread position: 13-311
Cow position: chr8:36333499-36333804 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 241, 0

Conread position: 13-311
Cow position: chr8:53837755-53837455 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 242, 174

Conread position: 13-311
Cow position: chr8:55271715-55272017 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 29

Conread position: 15-311
Cow position: chr8:43230-43528 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 239, 101

Conread position: 15-311
Cow position: chr8:1467939-1467633 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 0

Conread position: 16-310
Cow position: chr8:1582268-1581963 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 0

Conread position: 19-311
Cow position: chr8:10751152-10750854 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 235, 203

Conread position: 20-384
Cow position: chr8:9640703-9640311 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 43

Conread position: 29-309
Cow position: chr8:51037786-51038083 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 208
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 97, 0

Conread position: 34-311
Cow position: chr8:47467879-47468164 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 36-380
Cow position: chr8:18577963-18578300 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 251
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 183, 54

Conread position: 38-310
Cow position: chr8:11764745-11764461 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 210
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 143, 121

Conread position: 38-311
Cow position: chr8:29919202-29919471 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 95

Conread position: 39-310
Cow position: chr8:42655209-42655482 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 207
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 150, 171

Conread position: 44-309
Cow position: chr8:36633730-36634002 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 98

Conread position: 50-311
Cow position: chr8:9738311-9738044 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 148

Conread position: 63-311
Cow position: chr8:24191740-24191482 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 0

Conread position: 64-311
Cow position: chr8:27819666-27819419 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 180
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 26, 70

Conread position: 65-311
Cow position: chr8:21041861-21042117 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 0

Conread position: 73-311
Cow position: chr8:27591025-27591255 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 189
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 182, 98

Conread position: 75-311
Cow position: chr8:40890556-40890785 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 183
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 103, 65

Conread position: 77-310
Cow position: chr8:23386012-23386248 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 172
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 174, 80

Conread position: 77-311
Cow position: chr8:16733540-16733307 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 186
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 134, 163

Conread position: 87-311
Cow position: chr8:4296856-4296627 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 31

Conread position: 94-311
Cow position: chr8:11604967-11604740 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 172
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 86, 58

Conread position: 103-311
Cow position: chr8:43541824-43542042 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 0

Conread position: 130-310
Cow position: chr8:55341627-55341441 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 145
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 108, 36

Conread position: 142-311
Cow position: chr8:45157854-45158035 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 138
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 74, 0

Conread position: 156-310
Cow position: chr8:10740967-10741131 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 142
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 52, 0

Conread position: 165-309
Cow position: chr8:50996452-50996303 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 132
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 89, 95

Conread position: 185-311
Cow position: chr8:8954170-8954306 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 115
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 34, 0

Conread position: 207-311
Cow position: chr8:38088542-38088433 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 96
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 47, 0

Conread position: 212-311
Cow position: chr8:51068681-51068575 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 92
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 39, 0

Conread position: 1-277
Cow position: chr9:35593601-35593878 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 35

Conread position: 1-298
Cow position: chr9:5453731-5453429 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-307
Cow position: chr9:9198587-9198280 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 33

Conread position: 1-309
Cow position: chr9:2209346-2209651 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 276, 74

Conread position: 1-309
Cow position: chr9:9015553-9015235 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-310
Cow position: chr9:1728826-1729147 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 0

Conread position: 1-310
Cow position: chr9:43302741-43303058 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 314

Conread position: 1-311
Cow position: chr9:791833-792149 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 203

Conread position: 1-311
Cow position: chr9:1983296-1982982 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 221, 155

Conread position: 1-311
Cow position: chr9:5534739-5535057 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-311
Cow position: chr9:6251749-6251421 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 0

Conread position: 1-311
Cow position: chr9:7059584-7059904 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 0

Conread position: 1-311
Cow position: chr9:10939202-10938885 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 252, 0

Conread position: 1-311
Cow position: chr9:13473301-13473619 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 161

Conread position: 1-311
Cow position: chr9:17061916-17062227 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 50

Conread position: 1-311
Cow position: chr9:17303490-17303805 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 91

Conread position: 1-311
Cow position: chr9:18507348-18507665 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 0

Conread position: 1-311
Cow position: chr9:19156806-19157121 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 46

Conread position: 1-311
Cow position: chr9:27037590-27037270 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 0

Conread position: 1-311
Cow position: chr9:28024288-28023969 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 32

Conread position: 1-311
Cow position: chr9:28357043-28356725 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 101

Conread position: 1-311
Cow position: chr9:28658570-28658890 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 35

Conread position: 1-311
Cow position: chr9:28680453-28680134 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 115

Conread position: 1-311
Cow position: chr9:30674549-30674229 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-311
Cow position: chr9:31810057-31809744 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 45

Conread position: 1-311
Cow position: chr9:32971856-32971536 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-311
Cow position: chr9:33950730-33951038 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 32

Conread position: 1-311
Cow position: chr9:34770635-34770327 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 254, 199

Conread position: 1-311
Cow position: chr9:37160330-37160652 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-311
Cow position: chr9:50326323-50326004 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 0

Conread position: 1-311
Cow position: chr9:51179693-51180013 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-366
Cow position: chr9:1639219-1638838 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 28

Conread position: 1-369
Cow position: chr9:5627297-5626902 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 0

Conread position: 1-380
Cow position: chr9:20780384-20779977 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 395

Conread position: 1-384
Cow position: chr9:2496247-2496653 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 200

Conread position: 2-309
Cow position: chr9:7005196-7004890 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 252, 169

Conread position: 2-310
Cow position: chr9:47005220-47004901 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 0

Conread position: 2-311
Cow position: chr9:5006454-5006138 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 252, 0

Conread position: 2-311
Cow position: chr9:21411787-21411471 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 252, 0

Conread position: 2-311
Cow position: chr9:59508690-59509007 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 230
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 217, 39

Conread position: 2-370
Cow position: chr9:17900095-17900480 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 26

Conread position: 3-311
Cow position: chr9:2681052-2680733 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 31

Conread position: 3-311
Cow position: chr9:9515533-9515228 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 225
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 42, 56

Conread position: 3-311
Cow position: chr9:59480372-59480690 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 0

Conread position: 4-276
Cow position: chr9:2526766-2526491 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 117

Conread position: 4-310
Cow position: chr9:22320228-22320537 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 274, 239

Conread position: 13-310
Cow position: chr9:48795826-48796133 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 13-311
Cow position: chr9:2213612-2213306 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 187

Conread position: 13-311
Cow position: chr9:34240633-34240940 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 220

Conread position: 13-311
Cow position: chr9:42312159-42311854 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 241, 0

Conread position: 13-311
Cow position: chr9:45875986-45875678 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 13-311
Cow position: chr9:47044437-47044129 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 13-311
Cow position: chr9:52525624-52525316 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 19-286
Cow position: chr9:2865531-2865797 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 191
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 152, 14

Conread position: 29-311
Cow position: chr9:2631051-2630761 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 9

Conread position: 31-294
Cow position: chr9:5861417-5861685 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 7

Conread position: 37-310
Cow position: chr9:19108762-19108474 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 197
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 39, 28

Conread position: 40-311
Cow position: chr9:23421033-23420773 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 199
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 180, 43

Conread position: 45-311
Cow position: chr9:18023374-18023112 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 55

Conread position: 46-310
Cow position: chr9:38678568-38678295 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 17

Conread position: 62-311
Cow position: chr9:8164480-8164729 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 68

Conread position: 73-384
Cow position: chr9:46040849-46041185 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 327

Conread position: 93-310
Cow position: chr9:33593525-33593298 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 0

Conread position: 98-277
Cow position: chr9:12182039-12182219 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 138
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 156, 109

Conread position: 118-311
Cow position: chr9:59538466-59538263 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 168
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 0

Conread position: 121-311
Cow position: chr9:22437309-22437106 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 148
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 38, 94

Conread position: 163-311
Cow position: chr9:10644383-10644225 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 135
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 56, 0

Conread position: 174-311
Cow position: chr9:17313810-17313663 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 124
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 41, 0

Conread position: 176-277
Cow position: chr9:60461431-60461537 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 89
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 43, 0

Conread position: 178-310
Cow position: chr9:4307046-4307190 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 112
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 41, 0

Conread position: 182-311
Cow position: chr9:1994112-1994248 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 118
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 72, 0

Conread position: 212-309
Cow position: chr9:22433490-22433386 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 89
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 41, 0

Conread position: 214-311
Cow position: chr9:2607906-2607802 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 91
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 37, 0

Conread position: 1-277
Cow position: chrX:34008172-34007892 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 35

Conread position: 1-277
Cow position: chrX:42009017-42008743 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 116

Conread position: 1-299
Cow position: chrX:16023152-16022845 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 301

Conread position: 1-304
Cow position: chrX:11458423-11458727 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 121

Conread position: 1-309
Cow position: chrX:17890930-17890617 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 34

Conread position: 1-309
Cow position: chrX:45417215-45417531 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 10

Conread position: 1-311
Cow position: chrX:302489-302168 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 224
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 156, 21

Conread position: 1-311
Cow position: chrX:387525-387206 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 222
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 156, 175

Conread position: 1-311
Cow position: chrX:1549368-1549050 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 0

Conread position: 1-311
Cow position: chrX:2814090-2814410 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-311
Cow position: chrX:4906606-4906924 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 63

Conread position: 1-311
Cow position: chrX:5281396-5281712 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 49

Conread position: 1-311
Cow position: chrX:5865528-5865209 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 169

Conread position: 1-311
Cow position: chrX:7552419-7552739 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-311
Cow position: chrX:9095033-9094716 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 35

Conread position: 1-311
Cow position: chrX:12464395-12464074 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 238

Conread position: 1-311
Cow position: chrX:16360720-16361036 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 211

Conread position: 1-311
Cow position: chrX:16702071-16701751 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-311
Cow position: chrX:16781672-16781356 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 238, 176

Conread position: 1-311
Cow position: chrX:18657418-18657734 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 49

Conread position: 1-311
Cow position: chrX:19474762-19475084 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 62

Conread position: 1-311
Cow position: chrX:20034019-20034335 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 250, 233

Conread position: 1-311
Cow position: chrX:20725360-20725040 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-311
Cow position: chrX:21225867-21225547 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 0

Conread position: 1-311
Cow position: chrX:22565298-22565618 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-311
Cow position: chrX:23021706-23021384 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 0

Conread position: 1-311
Cow position: chrX:23133985-23133676 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 118

Conread position: 1-311
Cow position: chrX:23279414-23279097 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 0

Conread position: 1-311
Cow position: chrX:23394993-23394675 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 45

Conread position: 1-311
Cow position: chrX:23453665-23453984 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-311
Cow position: chrX:24807166-24807479 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 220
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 24, 35

Conread position: 1-311
Cow position: chrX:26756253-26756573 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 0

Conread position: 1-311
Cow position: chrX:28587368-28587049 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-311
Cow position: chrX:32328601-32328282 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 303

Conread position: 1-311
Cow position: chrX:38149986-38149665 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 0

Conread position: 1-311
Cow position: chrX:39561545-39561864 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 162

Conread position: 1-311
Cow position: chrX:39712940-39712623 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 250

Conread position: 1-312
Cow position: chrX:30167688-30168006 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 250, 0

Conread position: 1-367
Cow position: chrX:3406949-3407304 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 253
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 144, 27

Conread position: 1-384
Cow position: chrX:10529400-10529803 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 250, 0

Conread position: 1-384
Cow position: chrX:10867464-10867869 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 181

Conread position: 1-384
Cow position: chrX:26443934-26443531 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 221, 47

Conread position: 1-384
Cow position: chrX:43074124-43073736 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 37

Conread position: 2-309
Cow position: chrX:13416038-13416359 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 239
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 157, 114

Conread position: 2-309
Cow position: chrX:13929348-13929661 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 48

Conread position: 2-309
Cow position: chrX:18951345-18951643 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 252, 159

Conread position: 2-310
Cow position: chrX:21492555-21492236 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 0

Conread position: 2-311
Cow position: chrX:2480242-2480559 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 160

Conread position: 2-311
Cow position: chrX:13406899-13407212 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 70

Conread position: 2-311
Cow position: chrX:15978566-15978885 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 0

Conread position: 2-311
Cow position: chrX:16710351-16710033 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 33

Conread position: 2-311
Cow position: chrX:16804753-16805072 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 0

Conread position: 2-311
Cow position: chrX:21831901-21831582 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 0

Conread position: 2-311
Cow position: chrX:28625240-28625554 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 236

Conread position: 2-311
Cow position: chrX:29098812-29098503 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 274, 55

Conread position: 2-311
Cow position: chrX:30181539-30181857 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 314

Conread position: 2-311
Cow position: chrX:36839107-36838786 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 173

Conread position: 2-311
Cow position: chrX:38589797-38590108 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 246, 33

Conread position: 2-353
Cow position: chrX:2145359-2145006 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 277, 155

Conread position: 2-353
Cow position: chrX:27497262-27496908 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 33

Conread position: 3-277
Cow position: chrX:22590453-22590735 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 0

Conread position: 3-301
Cow position: chrX:21267683-21267987 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 18

Conread position: 3-311
Cow position: chrX:3360210-3359898 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 49

Conread position: 3-311
Cow position: chrX:20133768-20134079 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 30

Conread position: 3-311
Cow position: chrX:23317487-23317807 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 192
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 127, 198

Conread position: 3-311
Cow position: chrX:23388163-23388480 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 45

Conread position: 3-311
Cow position: chrX:24770469-24770783 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 0

Conread position: 3-311
Cow position: chrX:26274346-26274035 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 274, 240

Conread position: 3-311
Cow position: chrX:27978437-27978747 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 247, 30

Conread position: 3-311
Cow position: chrX:41686999-41686678 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 215
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 198, 127

Conread position: 5-311
Cow position: chrX:20799691-20799369 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 234
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 142, 71

Conread position: 13-310
Cow position: chrX:11462618-11462925 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 0

Conread position: 13-310
Cow position: chrX:16045346-16045046 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 265, 230

Conread position: 13-311
Cow position: chrX:2578796-2578493 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 21

Conread position: 13-311
Cow position: chrX:5360384-5360079 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 238, 0

Conread position: 13-311
Cow position: chrX:7119867-7119559 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 13-311
Cow position: chrX:8481826-8481522 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 106

Conread position: 13-311
Cow position: chrX:20741253-20741560 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 90

Conread position: 13-311
Cow position: chrX:24445833-24446141 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 13-311
Cow position: chrX:24731025-24730717 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 13-311
Cow position: chrX:27304317-27304019 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 241, 40

Conread position: 13-311
Cow position: chrX:29094940-29095248 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 13-311
Cow position: chrX:30437282-30436974 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 13-311
Cow position: chrX:34093452-34093760 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 13-311
Cow position: chrX:35532234-35531929 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 241, 0

Conread position: 13-311
Cow position: chrX:37814525-37814217 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 14-310
Cow position: chrX:36536356-36536658 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 198

Conread position: 14-311
Cow position: chrX:5321338-5321645 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 0

Conread position: 14-311
Cow position: chrX:12345312-12345008 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 240, 0

Conread position: 14-311
Cow position: chrX:31979460-31979779 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 19

Conread position: 14-312
Cow position: chrX:21751284-21751592 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 0

Conread position: 17-311
Cow position: chrX:30072253-30071959 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 210
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 206, 11

Conread position: 19-311
Cow position: chrX:16809515-16809817 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 0

Conread position: 25-311
Cow position: chrX:27423920-27424216 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 0

Conread position: 29-311
Cow position: chrX:29909067-29909355 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 9

Conread position: 37-277
Cow position: chrX:6247829-6248066 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 185
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 111, 6

Conread position: 39-311
Cow position: chrX:33536937-33536652 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 205
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 61, 111

Conread position: 53-280
Cow position: chrX:24110235-24110466 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 173
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 105, 5

Conread position: 68-311
Cow position: chrX:6870760-6871013 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 0

Conread position: 103-311
Cow position: chrX:16464482-16464265 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 0

Conread position: 106-384
Cow position: chrX:13180270-13180574 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 211
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 67, 154

Conread position: 117-311
Cow position: chrX:41848943-41849134 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 160
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 32, 68

Conread position: 118-384
Cow position: chrX:31052110-31052391 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 203
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 134, 19

Conread position: 133-311
Cow position: chrX:14783222-14783407 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 153
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 89, 102

Conread position: 133-311
Cow position: chrX:31511868-31511675 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 149
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 86, 0

Conread position: 133-312
Cow position: chrX:28505005-28505194 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 155
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 86, 0

Conread position: 144-311
Cow position: chrX:3373674-3373851 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 151
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 75, 0

Conread position: 154-372
Cow position: chrX:24323157-24323385 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 142
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 65, 0

Conread position: 157-310
Cow position: chrX:9170142-9170303 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 136
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 56, 13

Conread position: 174-283
Cow position: chrX:30135890-30135780 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 98
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 80, 68

Conread position: 174-311
Cow position: chrX:3466426-3466573 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 124
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 45, 0

Conread position: 175-380
Cow position: chrX:39565106-39565321 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 160
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 44, 62

Conread position: 175-384
Cow position: chrX:21792838-21792610 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 174
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 79, 55

Conread position: 193-311
Cow position: chrX:47360614-47360738 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 64, 0

Conread position: 203-384
Cow position: chrX:4751459-4751645 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 137
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 13, 77

Conread position: 212-311
Cow position: chrX:7032640-7032534 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 93
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 39, 0