Cow genome map

Conread name: rspl04_n13.y1

Conread position: 312-558
Cow position: chr1:44164442-44164691 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 60

Conread position: 327-553
Cow position: chr1:44824635-44824873 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 168
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 53, 0

Conread position: 348-626
Cow position: chr1:22728446-22728739 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 290

Conread position: 348-626
Cow position: chr1:67009333-67009038 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 108

Conread position: 348-626
Cow position: chr1:75743923-75744217 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 47

Conread position: 13-626
Cow position: chr10:50608581-50609214 (view UCSC Genome Browser custom track)
Alignm length: 650
Alignm identity: 483
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 223

Conread position: 328-626
Cow position: chr10:1488208-1488507 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 224
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 52, 180

Conread position: 348-626
Cow position: chr10:3274603-3274901 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 221
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 32, 178

Conread position: 348-626
Cow position: chr10:51320687-51320977 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 203
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 33, 172

Conread position: 441-626
Cow position: chr10:15461924-15462123 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 151
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 14, 0

Conread position: 477-626
Cow position: chr10:9576543-9576394 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 118
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 382-626
Cow position: chr11:79020125-79019868 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 195
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 73, 0

Conread position: 388-626
Cow position: chr11:63166775-63166519 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 393-618
Cow position: chr11:30057603-30057844 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 188
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 23, 0

Conread position: 349-626
Cow position: chr12:23210251-23210540 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 213
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 33, 152

Conread position: 327-625
Cow position: chr13:42114635-42114319 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 229
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 21, 288

Conread position: 401-624
Cow position: chr13:17567452-17567686 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 186
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 50, 22

Conread position: 469-626
Cow position: chr13:47313363-47313204 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 121
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 15, 0

Conread position: 348-626
Cow position: chr14:16525519-16525234 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 56

Conread position: 507-620
Cow position: chr14:39779231-39779118 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 89
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 327-618
Cow position: chr15:24821653-24821965 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 103

Conread position: 329-626
Cow position: chr15:23332143-23332458 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 61

Conread position: 477-626
Cow position: chr15:276304-276155 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 111
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 327-624
Cow position: chr16:19015582-19015274 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 293

Conread position: 477-626
Cow position: chr16:54578705-54578856 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 127
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 120, 41

Conread position: 348-626
Cow position: chr17:44233651-44233359 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 263

Conread position: 383-626
Cow position: chr17:12326403-12326145 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 0

Conread position: 479-626
Cow position: chr17:30529957-30529811 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 110
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 125, 56

Conread position: 327-626
Cow position: chr18:32283198-32283525 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 236
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 25, 213

Conread position: 327-626
Cow position: chr18:32284717-32285044 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 236
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 25, 213

Conread position: 327-626
Cow position: chr18:32300863-32301189 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 236
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 25, 212

Conread position: 348-626
Cow position: chr18:28929748-28929446 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 0

Conread position: 327-626
Cow position: chr19:1581222-1580907 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 257

Conread position: 372-622
Cow position: chr19:43178857-43178605 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 184
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 10, 58

Conread position: 402-626
Cow position: chr19:32683735-32683971 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 169
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 53, 33

Conread position: 500-626
Cow position: chr19:44571674-44571805 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 105
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 97, 16

Conread position: 350-626
Cow position: chr2:37008812-37009103 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 104

Conread position: 451-595
Cow position: chr2:44170059-44170206 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 117
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 27, 45

Conread position: 457-626
Cow position: chr2:15568805-15568625 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 141
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 22, 0

Conread position: 502-626
Cow position: chr2:30909965-30910096 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 108
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 93, 0

Conread position: 487-626
Cow position: chr20:33363096-33363243 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 118
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 107, 61

Conread position: 327-626
Cow position: chr21:8126355-8126039 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 85

Conread position: 349-626
Cow position: chr21:48108388-48108106 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 205
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 32, 44

Conread position: 318-624
Cow position: chr22:26184817-26184481 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 242
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 31, 0

Conread position: 327-620
Cow position: chr22:24067010-24066692 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 0

Conread position: 327-624
Cow position: chr22:38107062-38107378 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 239
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 25, 192

Conread position: 329-626
Cow position: chr22:22154971-22155282 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 0

Conread position: 344-595
Cow position: chr22:13209980-13210246 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 195
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 40, 0

Conread position: 386-626
Cow position: chr22:1986443-1986689 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 197
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 69, 31

Conread position: 448-626
Cow position: chr22:29037058-29036872 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 144
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 31, 70

Conread position: 327-554
Cow position: chr23:27288893-27288652 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 165
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 54, 0

Conread position: 327-626
Cow position: chr23:39806237-39806549 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 226
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 53, 188

Conread position: 348-626
Cow position: chr23:1428199-1428487 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 161

Conread position: 479-626
Cow position: chr23:8697978-8698132 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 124
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 116, 0

Conread position: 348-625
Cow position: chr24:45004299-45004587 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 214
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 33, 56

Conread position: 327-496
Cow position: chr25:23367339-23367516 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 134
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 46, 0

Conread position: 327-622
Cow position: chr26:9867735-9867440 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 68

Conread position: 327-626
Cow position: chr26:8810477-8810795 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 238
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 25, 106

Conread position: 348-622
Cow position: chr26:12965227-12964954 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 59

Conread position: 389-595
Cow position: chr26:22247112-22247330 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 160
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 65, 0

Conread position: 429-626
Cow position: chr26:818963-818762 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 150
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 49, 23

Conread position: 348-626
Cow position: chr27:14669808-14670109 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 0

Conread position: 371-626
Cow position: chr27:21392968-21393235 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 151

Conread position: 323-595
Cow position: chr28:15063959-15063670 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 271

Conread position: 322-626
Cow position: chr29:4875549-4875220 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 348-626
Cow position: chr29:38409819-38410112 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 447-626
Cow position: chr29:8190979-8190796 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 143
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 23, 54

Conread position: 327-626
Cow position: chr3:2903948-2903637 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 53

Conread position: 327-626
Cow position: chr3:26833275-26832966 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 231
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 25, 150

Conread position: 327-626
Cow position: chr3:39970552-39970233 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 248

Conread position: 327-626
Cow position: chr3:40344729-40345061 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 228
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 56, 81

Conread position: 348-626
Cow position: chr3:43008060-43007761 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 214
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 36, 0

Conread position: 348-626
Cow position: chr3:83202123-83201832 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 0

Conread position: 348-595
Cow position: chr4:17112548-17112303 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 187
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 33, 46

Conread position: 348-626
Cow position: chr4:33613256-33612973 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 180

Conread position: 360-624
Cow position: chr4:6653144-6653415 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 195
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 21, 34

Conread position: 419-626
Cow position: chr5:55233280-55233058 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 171
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 36, 0

Conread position: 477-626
Cow position: chr5:16062256-16062105 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 122
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 118, 63

Conread position: 477-626
Cow position: chr5:17087467-17087320 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 125
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 122, 37

Conread position: 374-624
Cow position: chr6:18969232-18968966 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 196
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 79, 9

Conread position: 477-626
Cow position: chr6:38770871-38771022 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 118
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 28, 134

Conread position: 348-595
Cow position: chr7:20105589-20105331 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 180
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 36, 97

Conread position: 348-614
Cow position: chr7:40264252-40263978 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 189

Conread position: 426-624
Cow position: chr7:66131594-66131803 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 164
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 53, 0

Conread position: 504-626
Cow position: chr7:36664927-36665055 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 105
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 92, 22

Conread position: 349-626
Cow position: chr9:3878369-3878663 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 205
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 34, 45

Conread position: 350-624
Cow position: chr9:46316153-46316441 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 174

Conread position: 486-626
Cow position: chr9:61023100-61022954 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 117
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 111, 0

Conread position: 427-626
Cow position: chrX:8869887-8869674 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 162
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 28, 0