Cow genome map
Conread name: | rspl04_n13.y1 |
Conread position: | 312-558 |
Cow position: | chr1:44164442-44164691 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 196 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 60 |
Conread position: | 327-553 |
Cow position: | chr1:44824635-44824873 (view UCSC Genome Browser custom track) |
Alignm length: | 239 |
Alignm identity: | 168 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 53, 0 |
Conread position: | 348-626 |
Cow position: | chr1:22728446-22728739 (view UCSC Genome Browser custom track) |
Alignm length: | 295 |
Alignm identity: | 228 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 290 |
Conread position: | 348-626 |
Cow position: | chr1:67009333-67009038 (view UCSC Genome Browser custom track) |
Alignm length: | 298 |
Alignm identity: | 224 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 108 |
Conread position: | 348-626 |
Cow position: | chr1:75743923-75744217 (view UCSC Genome Browser custom track) |
Alignm length: | 297 |
Alignm identity: | 234 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 47 |
Conread position: | 13-626 |
Cow position: | chr10:50608581-50609214 (view UCSC Genome Browser custom track) |
Alignm length: | 650 |
Alignm identity: | 483 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 223 |
Conread position: | 328-626 |
Cow position: | chr10:1488208-1488507 (view UCSC Genome Browser custom track) |
Alignm length: | 308 |
Alignm identity: | 224 |
Alignm E-value: | 5.04467e-44 |
Alignm gaps (pig, cow): | 52, 180 |
Conread position: | 348-626 |
Cow position: | chr10:3274603-3274901 (view UCSC Genome Browser custom track) |
Alignm length: | 300 |
Alignm identity: | 221 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 32, 178 |
Conread position: | 348-626 |
Cow position: | chr10:51320687-51320977 (view UCSC Genome Browser custom track) |
Alignm length: | 295 |
Alignm identity: | 203 |
Alignm E-value: | 9e-29 |
Alignm gaps (pig, cow): | 33, 172 |
Conread position: | 441-626 |
Cow position: | chr10:15461924-15462123 (view UCSC Genome Browser custom track) |
Alignm length: | 200 |
Alignm identity: | 151 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 14, 0 |
Conread position: | 477-626 |
Cow position: | chr10:9576543-9576394 (view UCSC Genome Browser custom track) |
Alignm length: | 150 |
Alignm identity: | 118 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 382-626 |
Cow position: | chr11:79020125-79019868 (view UCSC Genome Browser custom track) |
Alignm length: | 258 |
Alignm identity: | 195 |
Alignm E-value: | 7.00649e-45 |
Alignm gaps (pig, cow): | 73, 0 |
Conread position: | 388-626 |
Cow position: | chr11:63166775-63166519 (view UCSC Genome Browser custom track) |
Alignm length: | 257 |
Alignm identity: | 200 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 45, 0 |
Conread position: | 393-618 |
Cow position: | chr11:30057603-30057844 (view UCSC Genome Browser custom track) |
Alignm length: | 242 |
Alignm identity: | 188 |
Alignm E-value: | 5.99756e-43 |
Alignm gaps (pig, cow): | 23, 0 |
Conread position: | 349-626 |
Cow position: | chr12:23210251-23210540 (view UCSC Genome Browser custom track) |
Alignm length: | 292 |
Alignm identity: | 213 |
Alignm E-value: | 3.00004e-41 |
Alignm gaps (pig, cow): | 33, 152 |
Conread position: | 327-625 |
Cow position: | chr13:42114635-42114319 (view UCSC Genome Browser custom track) |
Alignm length: | 318 |
Alignm identity: | 229 |
Alignm E-value: | 1.00053e-42 |
Alignm gaps (pig, cow): | 21, 288 |
Conread position: | 401-624 |
Cow position: | chr13:17567452-17567686 (view UCSC Genome Browser custom track) |
Alignm length: | 238 |
Alignm identity: | 186 |
Alignm E-value: | 1.00053e-42 |
Alignm gaps (pig, cow): | 50, 22 |
Conread position: | 469-626 |
Cow position: | chr13:47313363-47313204 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 121 |
Alignm E-value: | 7e-28 |
Alignm gaps (pig, cow): | 15, 0 |
Conread position: | 348-626 |
Cow position: | chr14:16525519-16525234 (view UCSC Genome Browser custom track) |
Alignm length: | 288 |
Alignm identity: | 229 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 56 |
Conread position: | 507-620 |
Cow position: | chr14:39779231-39779118 (view UCSC Genome Browser custom track) |
Alignm length: | 114 |
Alignm identity: | 89 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 327-618 |
Cow position: | chr15:24821653-24821965 (view UCSC Genome Browser custom track) |
Alignm length: | 314 |
Alignm identity: | 246 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 25, 103 |
Conread position: | 329-626 |
Cow position: | chr15:23332143-23332458 (view UCSC Genome Browser custom track) |
Alignm length: | 318 |
Alignm identity: | 240 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 51, 61 |
Conread position: | 477-626 |
Cow position: | chr15:276304-276155 (view UCSC Genome Browser custom track) |
Alignm length: | 150 |
Alignm identity: | 111 |
Alignm E-value: | 5e-25 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 327-624 |
Cow position: | chr16:19015582-19015274 (view UCSC Genome Browser custom track) |
Alignm length: | 310 |
Alignm identity: | 225 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 293 |
Conread position: | 477-626 |
Cow position: | chr16:54578705-54578856 (view UCSC Genome Browser custom track) |
Alignm length: | 157 |
Alignm identity: | 127 |
Alignm E-value: | 7e-28 |
Alignm gaps (pig, cow): | 120, 41 |
Conread position: | 348-626 |
Cow position: | chr17:44233651-44233359 (view UCSC Genome Browser custom track) |
Alignm length: | 294 |
Alignm identity: | 219 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 263 |
Conread position: | 383-626 |
Cow position: | chr17:12326403-12326145 (view UCSC Genome Browser custom track) |
Alignm length: | 259 |
Alignm identity: | 204 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 44, 0 |
Conread position: | 479-626 |
Cow position: | chr17:30529957-30529811 (view UCSC Genome Browser custom track) |
Alignm length: | 149 |
Alignm identity: | 110 |
Alignm E-value: | 9e-22 |
Alignm gaps (pig, cow): | 125, 56 |
Conread position: | 327-626 |
Cow position: | chr18:32283198-32283525 (view UCSC Genome Browser custom track) |
Alignm length: | 329 |
Alignm identity: | 236 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 25, 213 |
Conread position: | 327-626 |
Cow position: | chr18:32284717-32285044 (view UCSC Genome Browser custom track) |
Alignm length: | 329 |
Alignm identity: | 236 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 25, 213 |
Conread position: | 327-626 |
Cow position: | chr18:32300863-32301189 (view UCSC Genome Browser custom track) |
Alignm length: | 328 |
Alignm identity: | 236 |
Alignm E-value: | 3e-40 |
Alignm gaps (pig, cow): | 25, 212 |
Conread position: | 348-626 |
Cow position: | chr18:28929748-28929446 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 232 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 0 |
Conread position: | 327-626 |
Cow position: | chr19:1581222-1580907 (view UCSC Genome Browser custom track) |
Alignm length: | 319 |
Alignm identity: | 241 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 25, 257 |
Conread position: | 372-622 |
Cow position: | chr19:43178857-43178605 (view UCSC Genome Browser custom track) |
Alignm length: | 257 |
Alignm identity: | 184 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 10, 58 |
Conread position: | 402-626 |
Cow position: | chr19:32683735-32683971 (view UCSC Genome Browser custom track) |
Alignm length: | 239 |
Alignm identity: | 169 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 53, 33 |
Conread position: | 500-626 |
Cow position: | chr19:44571674-44571805 (view UCSC Genome Browser custom track) |
Alignm length: | 134 |
Alignm identity: | 105 |
Alignm E-value: | 1e-20 |
Alignm gaps (pig, cow): | 97, 16 |
Conread position: | 350-626 |
Cow position: | chr2:37008812-37009103 (view UCSC Genome Browser custom track) |
Alignm length: | 293 |
Alignm identity: | 226 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 15, 104 |
Conread position: | 451-595 |
Cow position: | chr2:44170059-44170206 (view UCSC Genome Browser custom track) |
Alignm length: | 149 |
Alignm identity: | 117 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 27, 45 |
Conread position: | 457-626 |
Cow position: | chr2:15568805-15568625 (view UCSC Genome Browser custom track) |
Alignm length: | 181 |
Alignm identity: | 141 |
Alignm E-value: | 5e-32 |
Alignm gaps (pig, cow): | 22, 0 |
Conread position: | 502-626 |
Cow position: | chr2:30909965-30910096 (view UCSC Genome Browser custom track) |
Alignm length: | 132 |
Alignm identity: | 108 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 93, 0 |
Conread position: | 487-626 |
Cow position: | chr20:33363096-33363243 (view UCSC Genome Browser custom track) |
Alignm length: | 149 |
Alignm identity: | 118 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 107, 61 |
Conread position: | 327-626 |
Cow position: | chr21:8126355-8126039 (view UCSC Genome Browser custom track) |
Alignm length: | 322 |
Alignm identity: | 244 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 85 |
Conread position: | 349-626 |
Cow position: | chr21:48108388-48108106 (view UCSC Genome Browser custom track) |
Alignm length: | 292 |
Alignm identity: | 205 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 32, 44 |
Conread position: | 318-624 |
Cow position: | chr22:26184817-26184481 (view UCSC Genome Browser custom track) |
Alignm length: | 337 |
Alignm identity: | 242 |
Alignm E-value: | 3.00018e-42 |
Alignm gaps (pig, cow): | 31, 0 |
Conread position: | 327-620 |
Cow position: | chr22:24067010-24066692 (view UCSC Genome Browser custom track) |
Alignm length: | 319 |
Alignm identity: | 240 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 25, 0 |
Conread position: | 327-624 |
Cow position: | chr22:38107062-38107378 (view UCSC Genome Browser custom track) |
Alignm length: | 324 |
Alignm identity: | 239 |
Alignm E-value: | 8.99634e-43 |
Alignm gaps (pig, cow): | 25, 192 |
Conread position: | 329-626 |
Cow position: | chr22:22154971-22155282 (view UCSC Genome Browser custom track) |
Alignm length: | 312 |
Alignm identity: | 228 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 51, 0 |
Conread position: | 344-595 |
Cow position: | chr22:13209980-13210246 (view UCSC Genome Browser custom track) |
Alignm length: | 267 |
Alignm identity: | 195 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 40, 0 |
Conread position: | 386-626 |
Cow position: | chr22:1986443-1986689 (view UCSC Genome Browser custom track) |
Alignm length: | 255 |
Alignm identity: | 197 |
Alignm E-value: | 3.00018e-42 |
Alignm gaps (pig, cow): | 69, 31 |
Conread position: | 448-626 |
Cow position: | chr22:29037058-29036872 (view UCSC Genome Browser custom track) |
Alignm length: | 189 |
Alignm identity: | 144 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 31, 70 |
Conread position: | 327-554 |
Cow position: | chr23:27288893-27288652 (view UCSC Genome Browser custom track) |
Alignm length: | 242 |
Alignm identity: | 165 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 54, 0 |
Conread position: | 327-626 |
Cow position: | chr23:39806237-39806549 (view UCSC Genome Browser custom track) |
Alignm length: | 315 |
Alignm identity: | 226 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 53, 188 |
Conread position: | 348-626 |
Cow position: | chr23:1428199-1428487 (view UCSC Genome Browser custom track) |
Alignm length: | 290 |
Alignm identity: | 225 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 161 |
Conread position: | 479-626 |
Cow position: | chr23:8697978-8698132 (view UCSC Genome Browser custom track) |
Alignm length: | 155 |
Alignm identity: | 124 |
Alignm E-value: | 7e-31 |
Alignm gaps (pig, cow): | 116, 0 |
Conread position: | 348-625 |
Cow position: | chr24:45004299-45004587 (view UCSC Genome Browser custom track) |
Alignm length: | 292 |
Alignm identity: | 214 |
Alignm E-value: | 2.94273e-44 |
Alignm gaps (pig, cow): | 33, 56 |
Conread position: | 327-496 |
Cow position: | chr25:23367339-23367516 (view UCSC Genome Browser custom track) |
Alignm length: | 178 |
Alignm identity: | 134 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 46, 0 |
Conread position: | 327-622 |
Cow position: | chr26:9867735-9867440 (view UCSC Genome Browser custom track) |
Alignm length: | 304 |
Alignm identity: | 226 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 68 |
Conread position: | 327-626 |
Cow position: | chr26:8810477-8810795 (view UCSC Genome Browser custom track) |
Alignm length: | 323 |
Alignm identity: | 238 |
Alignm E-value: | 2.94273e-44 |
Alignm gaps (pig, cow): | 25, 106 |
Conread position: | 348-622 |
Cow position: | chr26:12965227-12964954 (view UCSC Genome Browser custom track) |
Alignm length: | 286 |
Alignm identity: | 229 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 59 |
Conread position: | 389-595 |
Cow position: | chr26:22247112-22247330 (view UCSC Genome Browser custom track) |
Alignm length: | 219 |
Alignm identity: | 160 |
Alignm E-value: | 6e-31 |
Alignm gaps (pig, cow): | 65, 0 |
Conread position: | 429-626 |
Cow position: | chr26:818963-818762 (view UCSC Genome Browser custom track) |
Alignm length: | 205 |
Alignm identity: | 150 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 49, 23 |
Conread position: | 348-626 |
Cow position: | chr27:14669808-14670109 (view UCSC Genome Browser custom track) |
Alignm length: | 302 |
Alignm identity: | 238 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 0 |
Conread position: | 371-626 |
Cow position: | chr27:21392968-21393235 (view UCSC Genome Browser custom track) |
Alignm length: | 270 |
Alignm identity: | 214 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 151 |
Conread position: | 323-595 |
Cow position: | chr28:15063959-15063670 (view UCSC Genome Browser custom track) |
Alignm length: | 291 |
Alignm identity: | 218 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 27, 271 |
Conread position: | 322-626 |
Cow position: | chr29:4875549-4875220 (view UCSC Genome Browser custom track) |
Alignm length: | 330 |
Alignm identity: | 269 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 0 |
Conread position: | 348-626 |
Cow position: | chr29:38409819-38410112 (view UCSC Genome Browser custom track) |
Alignm length: | 294 |
Alignm identity: | 218 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 447-626 |
Cow position: | chr29:8190979-8190796 (view UCSC Genome Browser custom track) |
Alignm length: | 191 |
Alignm identity: | 143 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 23, 54 |
Conread position: | 327-626 |
Cow position: | chr3:2903948-2903637 (view UCSC Genome Browser custom track) |
Alignm length: | 314 |
Alignm identity: | 231 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 88, 53 |
Conread position: | 327-626 |
Cow position: | chr3:26833275-26832966 (view UCSC Genome Browser custom track) |
Alignm length: | 322 |
Alignm identity: | 231 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 25, 150 |
Conread position: | 327-626 |
Cow position: | chr3:39970552-39970233 (view UCSC Genome Browser custom track) |
Alignm length: | 321 |
Alignm identity: | 253 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 248 |
Conread position: | 327-626 |
Cow position: | chr3:40344729-40345061 (view UCSC Genome Browser custom track) |
Alignm length: | 334 |
Alignm identity: | 228 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 56, 81 |
Conread position: | 348-626 |
Cow position: | chr3:43008060-43007761 (view UCSC Genome Browser custom track) |
Alignm length: | 300 |
Alignm identity: | 214 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 36, 0 |
Conread position: | 348-626 |
Cow position: | chr3:83202123-83201832 (view UCSC Genome Browser custom track) |
Alignm length: | 292 |
Alignm identity: | 217 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 0 |
Conread position: | 348-595 |
Cow position: | chr4:17112548-17112303 (view UCSC Genome Browser custom track) |
Alignm length: | 256 |
Alignm identity: | 187 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 33, 46 |
Conread position: | 348-626 |
Cow position: | chr4:33613256-33612973 (view UCSC Genome Browser custom track) |
Alignm length: | 295 |
Alignm identity: | 230 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 180 |
Conread position: | 360-624 |
Cow position: | chr4:6653144-6653415 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 195 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 21, 34 |
Conread position: | 419-626 |
Cow position: | chr5:55233280-55233058 (view UCSC Genome Browser custom track) |
Alignm length: | 223 |
Alignm identity: | 171 |
Alignm E-value: | 9e-38 |
Alignm gaps (pig, cow): | 36, 0 |
Conread position: | 477-626 |
Cow position: | chr5:16062256-16062105 (view UCSC Genome Browser custom track) |
Alignm length: | 157 |
Alignm identity: | 122 |
Alignm E-value: | 7e-25 |
Alignm gaps (pig, cow): | 118, 63 |
Conread position: | 477-626 |
Cow position: | chr5:17087467-17087320 (view UCSC Genome Browser custom track) |
Alignm length: | 151 |
Alignm identity: | 125 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 122, 37 |
Conread position: | 374-624 |
Cow position: | chr6:18969232-18968966 (view UCSC Genome Browser custom track) |
Alignm length: | 270 |
Alignm identity: | 196 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 79, 9 |
Conread position: | 477-626 |
Cow position: | chr6:38770871-38771022 (view UCSC Genome Browser custom track) |
Alignm length: | 153 |
Alignm identity: | 118 |
Alignm E-value: | 7e-27 |
Alignm gaps (pig, cow): | 28, 134 |
Conread position: | 348-595 |
Cow position: | chr7:20105589-20105331 (view UCSC Genome Browser custom track) |
Alignm length: | 260 |
Alignm identity: | 180 |
Alignm E-value: | 9e-29 |
Alignm gaps (pig, cow): | 36, 97 |
Conread position: | 348-614 |
Cow position: | chr7:40264252-40263978 (view UCSC Genome Browser custom track) |
Alignm length: | 276 |
Alignm identity: | 216 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 189 |
Conread position: | 426-624 |
Cow position: | chr7:66131594-66131803 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 164 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 53, 0 |
Conread position: | 504-626 |
Cow position: | chr7:36664927-36665055 (view UCSC Genome Browser custom track) |
Alignm length: | 130 |
Alignm identity: | 105 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 92, 22 |
Conread position: | 349-626 |
Cow position: | chr9:3878369-3878663 (view UCSC Genome Browser custom track) |
Alignm length: | 296 |
Alignm identity: | 205 |
Alignm E-value: | 4e-31 |
Alignm gaps (pig, cow): | 34, 45 |
Conread position: | 350-624 |
Cow position: | chr9:46316153-46316441 (view UCSC Genome Browser custom track) |
Alignm length: | 290 |
Alignm identity: | 225 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 174 |
Conread position: | 486-626 |
Cow position: | chr9:61023100-61022954 (view UCSC Genome Browser custom track) |
Alignm length: | 147 |
Alignm identity: | 117 |
Alignm E-value: | 9e-29 |
Alignm gaps (pig, cow): | 111, 0 |
Conread position: | 427-626 |
Cow position: | chrX:8869887-8869674 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 162 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 28, 0 |