Cow genome map


           Conread name:
           rspl23_p19.y1
        

               Conread position:
               1-173
               

               Cow position:
               chr10:50419639-50419472 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               131
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               13, 71
               

               Conread position:
               1-178
               

               Cow position:
               chr10:33459930-33460115 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               14, 136
               

               Conread position:
               1-183
               

               Cow position:
               chr10:15313759-15313576 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               13, 134
               

               Conread position:
               5-173
               

               Cow position:
               chr10:36315910-36315733 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               130
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               9, 108
               

               Conread position:
               10-173
               

               Cow position:
               chr10:32105618-32105450 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               94, 126
               

               Conread position:
               1-105
               

               Cow position:
               chr11:40540351-40540455 (view UCSC Genome Browser custom track)
               

               Alignm length:
               106
               

               Alignm identity:
               87
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               13, 33
               

               Conread position:
               1-166
               

               Cow position:
               chr11:65879138-65879302 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               127
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               13, 131
               

               Conread position:
               1-169
               

               Cow position:
               chr11:71359313-71359144 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               134
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               13, 109
               

               Conread position:
               1-180
               

               Cow position:
               chr11:372144-372333 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               1-183
               

               Cow position:
               chr11:32815947-32815760 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               13, 137
               

               Conread position:
               1-183
               

               Cow position:
               chr11:48258936-48258758 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               9, 38
               

               Conread position:
               1-183
               

               Cow position:
               chr11:62580249-62580437 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               10, 137
               

               Conread position:
               8-183
               

               Cow position:
               chr11:62582238-62582058 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               96, 129
               

               Conread position:
               9-183
               

               Cow position:
               chr11:65995064-65994894 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               95, 127
               

               Conread position:
               55-178
               

               Cow position:
               chr11:65957222-65957098 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               104
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               113, 77
               

               Conread position:
               1-115
               

               Cow position:
               chr12:5573547-5573662 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               99
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               11, 111
               

               Conread position:
               1-115
               

               Cow position:
               chr12:24572090-24572204 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               97
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               15, 110
               

               Conread position:
               9-183
               

               Cow position:
               chr12:17709952-17709783 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               136
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               98, 29
               

               Conread position:
               1-108
               

               Cow position:
               chr13:16541632-16541524 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               88
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               1-115
               

               Cow position:
               chr13:10418351-10418237 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               95
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               11, 110
               

               Conread position:
               1-182
               

               Cow position:
               chr13:10042537-10042733 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               1-183
               

               Cow position:
               chr13:39509332-39509517 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               14, 72
               

               Conread position:
               1-184
               

               Cow position:
               chr13:51122355-51122540 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               9, 43
               

               Conread position:
               3-180
               

               Cow position:
               chr13:16035454-16035625 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               142
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               11, 34
               

               Conread position:
               6-115
               

               Cow position:
               chr13:9893568-9893460 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               89
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               30-183
               

               Cow position:
               chr13:50639563-50639407 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               120
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               74, 96
               

               Conread position:
               31-182
               

               Cow position:
               chr13:22472297-22472442 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               121
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               137, 68
               

               Conread position:
               9-182
               

               Cow position:
               chr14:5330623-5330802 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               132
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               12, 130
               

               Conread position:
               1-113
               

               Cow position:
               chr15:7865103-7864990 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               95
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               1-115
               

               Cow position:
               chr15:3897108-3897220 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               93
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               13, 49
               

               Conread position:
               1-180
               

               Cow position:
               chr15:4312152-4312327 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               133
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               10, 78
               

               Conread position:
               1-183
               

               Cow position:
               chr15:695225-695037 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               10, 137
               

               Conread position:
               1-183
               

               Cow position:
               chr15:20550592-20550405 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               107, 136
               

               Conread position:
               1-183
               

               Cow position:
               chr15:35858482-35858299 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               14, 49
               

               Conread position:
               1-183
               

               Cow position:
               chr15:42639634-42639820 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               13, 71
               

               Conread position:
               1-183
               

               Cow position:
               chr16:9521882-9521694 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               13, 137
               

               Conread position:
               1-115
               

               Cow position:
               chr17:14367974-14367860 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               98
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               13, 82
               

               Conread position:
               1-115
               

               Cow position:
               chr17:24866635-24866522 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               98
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               9, 67
               

               Conread position:
               1-183
               

               Cow position:
               chr17:3357175-3356987 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               13, 19
               

               Conread position:
               9-183
               

               Cow position:
               chr17:37371680-37371858 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               97, 17
               

               Conread position:
               16-183
               

               Cow position:
               chr17:4787368-4787199 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               85, 121
               

               Conread position:
               29-180
               

               Cow position:
               chr17:25491946-25491790 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               123
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               71, 106
               

               Conread position:
               1-166
               

               Cow position:
               chr18:39044098-39043928 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               131
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               13, 138
               

               Conread position:
               7-183
               

               Cow position:
               chr18:35039747-35039577 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               7, 24
               

               Conread position:
               9-192
               

               Cow position:
               chr18:25132134-25131946 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               98, 128
               

               Conread position:
               12-113
               

               Cow position:
               chr18:48387889-48387987 (view UCSC Genome Browser custom track)
               

               Alignm length:
               102
               

               Alignm identity:
               85
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               1-108
               

               Cow position:
               chr19:29084241-29084132 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               88
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               1-115
               

               Cow position:
               chr19:56171328-56171214 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               94
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               12, 110
               

               Conread position:
               3-186
               

               Cow position:
               chr19:22463717-22463905 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               146
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               11, 134
               

               Conread position:
               9-180
               

               Cow position:
               chr19:10136050-10135876 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               137
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               95, 128
               

               Conread position:
               9-183
               

               Cow position:
               chr19:5346210-5346388 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               136
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               98, 66
               

               Conread position:
               1-105
               

               Cow position:
               chr2:19245895-19246000 (view UCSC Genome Browser custom track)
               

               Alignm length:
               106
               

               Alignm identity:
               86
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               1-115
               

               Cow position:
               chr2:42231702-42231816 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               93
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               14, 107
               

               Conread position:
               1-167
               

               Cow position:
               chr2:42318121-42318285 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               10, 53
               

               Conread position:
               1-176
               

               Cow position:
               chr2:67247994-67248176 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               143
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               14, 140
               

               Conread position:
               1-183
               

               Cow position:
               chr2:6724329-6724149 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               168, 15
               

               Conread position:
               1-183
               

               Cow position:
               chr2:41128609-41128796 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               152
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               102, 136
               

               Conread position:
               1-183
               

               Cow position:
               chr2:46220830-46220642 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               13, 137
               

               Conread position:
               1-192
               

               Cow position:
               chr2:55872177-55871982 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               13, 17
               

               Conread position:
               1-195
               

               Cow position:
               chr2:40049766-40049966 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               13, 30
               

               Conread position:
               2-159
               

               Cow position:
               chr2:68605729-68605883 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               118
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               11, 61
               

               Conread position:
               3-114
               

               Cow position:
               chr2:72618505-72618394 (view UCSC Genome Browser custom track)
               

               Alignm length:
               113
               

               Alignm identity:
               90
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               11, 108
               

               Conread position:
               14-183
               

               Cow position:
               chr2:42655586-42655418 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               130
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               154, 16
               

               Conread position:
               1-105
               

               Cow position:
               chr20:7394920-7394815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               106
               

               Alignm identity:
               93
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               1-183
               

               Cow position:
               chr20:7161198-7161380 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               12, 130
               

               Conread position:
               2-182
               

               Cow position:
               chr20:28836375-28836189 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               13, 135
               

               Conread position:
               9-183
               

               Cow position:
               chr20:39688254-39688430 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               95, 114
               

               Conread position:
               1-108
               

               Cow position:
               chr21:39327469-39327361 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               89
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               1-162
               

               Cow position:
               chr21:40107386-40107556 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               18, 142
               

               Conread position:
               1-179
               

               Cow position:
               chr21:20022724-20022896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               143
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               13, 106
               

               Conread position:
               1-183
               

               Cow position:
               chr21:19781630-19781455 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               138
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               14, 41
               

               Conread position:
               3-182
               

               Cow position:
               chr21:13812260-13812078 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               10, 70
               

               Conread position:
               9-181
               

               Cow position:
               chr21:7691443-7691269 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               92, 128
               

               Conread position:
               1-108
               

               Cow position:
               chr22:15634527-15634419 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               91
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               14, 44
               

               Conread position:
               1-122
               

               Cow position:
               chr22:10222465-10222342 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               99
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               1-133
               

               Cow position:
               chr22:11398951-11398815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               107
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               13, 47
               

               Conread position:
               1-183
               

               Cow position:
               chr22:6681425-6681237 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               12, 137
               

               Conread position:
               1-183
               

               Cow position:
               chr22:17857394-17857577 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               154
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               12, 132
               

               Conread position:
               1-183
               

               Cow position:
               chr22:27706321-27706130 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               146
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               13, 79
               

               Conread position:
               8-182
               

               Cow position:
               chr22:6760316-6760495 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               150
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               99, 130
               

               Conread position:
               9-105
               

               Cow position:
               chr22:36606473-36606569 (view UCSC Genome Browser custom track)
               

               Alignm length:
               97
               

               Alignm identity:
               80
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               46-183
               

               Cow position:
               chr22:7886702-7886560 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               113
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               5, 90
               

               Conread position:
               1-115
               

               Cow position:
               chr23:3561717-3561603 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               94
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               9, 110
               

               Conread position:
               1-130
               

               Cow position:
               chr23:269841-269971 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               1-131
               

               Cow position:
               chr23:8954872-8954745 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               105
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               1-144
               

               Cow position:
               chr23:33643006-33643154 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               12, 137
               

               Conread position:
               1-183
               

               Cow position:
               chr23:31627601-31627792 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               9, 140
               

               Conread position:
               1-126
               

               Cow position:
               chr24:43622967-43623094 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               107
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               1-149
               

               Cow position:
               chr24:15802561-15802714 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               118
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               13, 132
               

               Conread position:
               1-115
               

               Cow position:
               chr25:26147157-26147044 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               95
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               109, 0
               

               Conread position:
               1-150
               

               Cow position:
               chr25:36128308-36128162 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               12, 63
               

               Conread position:
               1-163
               

               Cow position:
               chr25:20280619-20280453 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               13, 137
               

               Conread position:
               1-183
               

               Cow position:
               chr25:20588501-20588323 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               139
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               106, 13
               

               Conread position:
               1-198
               

               Cow position:
               chr25:36544554-36544353 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               154
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               13, 125
               

               Conread position:
               6-183
               

               Cow position:
               chr25:36054559-36054380 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               140
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               98, 12
               

               Conread position:
               1-177
               

               Cow position:
               chr26:34663309-34663129 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               134
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               13, 137
               

               Conread position:
               1-183
               

               Cow position:
               chr26:13079073-13079260 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               12, 137
               

               Conread position:
               1-183
               

               Cow position:
               chr26:34142801-34142616 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               136
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               13, 30
               

               Conread position:
               1-184
               

               Cow position:
               chr26:28241855-28241667 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               14, 126
               

               Conread position:
               3-130
               

               Cow position:
               chr26:33039069-33039197 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               104
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               3-195
               

               Cow position:
               chr26:32801471-32801668 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               11, 125
               

               Conread position:
               36-180
               

               Cow position:
               chr26:29849450-29849301 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               68, 101
               

               Conread position:
               1-115
               

               Cow position:
               chr27:22227096-22227209 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               92
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               13, 71
               

               Conread position:
               1-115
               

               Cow position:
               chr27:25387299-25387186 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               92
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               13, 71
               

               Conread position:
               2-181
               

               Cow position:
               chr27:25032995-25033179 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               13, 66
               

               Conread position:
               3-113
               

               Cow position:
               chr27:25072489-25072377 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               92
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               11, 72
               

               Conread position:
               6-163
               

               Cow position:
               chr27:29225506-29225660 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               9-186
               

               Cow position:
               chr27:30891408-30891230 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               98, 128
               

               Conread position:
               1-88
               

               Cow position:
               chr28:3702600-3702512 (view UCSC Genome Browser custom track)
               

               Alignm length:
               89
               

               Alignm identity:
               78
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               1-106
               

               Cow position:
               chr28:5219085-5218981 (view UCSC Genome Browser custom track)
               

               Alignm length:
               106
               

               Alignm identity:
               86
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               1-108
               

               Cow position:
               chr28:5862017-5861907 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               90
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               1-112
               

               Cow position:
               chr28:7629035-7629146 (view UCSC Genome Browser custom track)
               

               Alignm length:
               113
               

               Alignm identity:
               91
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               13, 107
               

               Conread position:
               1-183
               

               Cow position:
               chr28:4217062-4216889 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               13, 22
               

               Conread position:
               3-177
               

               Cow position:
               chr28:5231918-5231741 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               137
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               12, 58
               

               Conread position:
               3-184
               

               Cow position:
               chr28:12209802-12209984 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               149
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               9, 130
               

               Conread position:
               9-115
               

               Cow position:
               chr28:10199674-10199781 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               87
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               1-113
               

               Cow position:
               chr29:3750191-3750080 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               97
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               13, 58
               

               Conread position:
               1-183
               

               Cow position:
               chr29:890807-890621 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               103, 12
               

               Conread position:
               1-183
               

               Cow position:
               chr29:1499808-1499996 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               13, 137
               

               Conread position:
               1-186
               

               Cow position:
               chr29:1629781-1629612 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               167, 21
               

               Conread position:
               9-115
               

               Cow position:
               chr29:26425959-26426065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               88
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               81, 102
               

               Conread position:
               9-183
               

               Cow position:
               chr29:915985-915808 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               97, 126
               

               Conread position:
               10-176
               

               Cow position:
               chr29:906037-905879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               126
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               159, 100
               

               Conread position:
               1-118
               

               Cow position:
               chr3:39963848-39963963 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               96
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               109, 13
               

               Conread position:
               1-131
               

               Cow position:
               chr3:12130001-12129866 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               1-179
               

               Cow position:
               chr3:81267300-81267484 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               13, 136
               

               Conread position:
               2-113
               

               Cow position:
               chr3:83489057-83488946 (view UCSC Genome Browser custom track)
               

               Alignm length:
               113
               

               Alignm identity:
               94
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               12, 109
               

               Conread position:
               2-115
               

               Cow position:
               chr3:74540730-74540842 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               97
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               3-183
               

               Cow position:
               chr3:59559979-59559793 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               155
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               11, 135
               

               Conread position:
               10-183
               

               Cow position:
               chr3:66133359-66133181 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               76, 127
               

               Conread position:
               22-182
               

               Cow position:
               chr3:58244802-58244968 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               132
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               28, 116
               

               Conread position:
               31-183
               

               Cow position:
               chr3:39155478-39155635 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               123
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               70, 106
               

               Conread position:
               36-186
               

               Cow position:
               chr3:23086738-23086889 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               116, 96
               

               Conread position:
               1-163
               

               Cow position:
               chr4:51647167-51647005 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               13, 109
               

               Conread position:
               8-113
               

               Cow position:
               chr4:44716060-44715955 (view UCSC Genome Browser custom track)
               

               Alignm length:
               106
               

               Alignm identity:
               86
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               9-115
               

               Cow position:
               chr4:42911134-42911028 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               89
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               33, 102
               

               Conread position:
               9-129
               

               Cow position:
               chr4:352645-352522 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               102
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               98, 40
               

               Conread position:
               11-192
               

               Cow position:
               chr4:48955945-48956133 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               93, 126
               

               Conread position:
               22-109
               

               Cow position:
               chr4:5845738-5845825 (view UCSC Genome Browser custom track)
               

               Alignm length:
               88
               

               Alignm identity:
               76
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-113
               

               Cow position:
               chr5:17682678-17682790 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               94
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               14, 110
               

               Conread position:
               1-113
               

               Cow position:
               chr5:58760845-58760732 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               90
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               1-115
               

               Cow position:
               chr5:50225997-50225883 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               96
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               13, 110
               

               Conread position:
               1-176
               

               Cow position:
               chr5:46413912-46414099 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               13, 78
               

               Conread position:
               1-183
               

               Cow position:
               chr5:43115565-43115383 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               135
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               10, 30
               

               Conread position:
               1-183
               

               Cow position:
               chr5:56621503-56621329 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               137
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               14, 93
               

               Conread position:
               14-183
               

               Cow position:
               chr5:23758618-23758793 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               69, 124
               

               Conread position:
               1-183
               

               Cow position:
               chr6:14916643-14916839 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               78, 146
               

               Conread position:
               19-120
               

               Cow position:
               chr6:48361446-48361547 (view UCSC Genome Browser custom track)
               

               Alignm length:
               102
               

               Alignm identity:
               85
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-152
               

               Cow position:
               chr7:32892203-32892358 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               124
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               13, 137
               

               Conread position:
               1-183
               

               Cow position:
               chr7:53487108-53487295 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               94, 13
               

               Conread position:
               1-183
               

               Cow position:
               chr7:61700490-61700303 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               143
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               12, 137
               

               Conread position:
               9-153
               

               Cow position:
               chr7:10510443-10510583 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               1-159
               

               Cow position:
               chr8:44021706-44021546 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               132
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               10, 137
               

               Conread position:
               1-183
               

               Cow position:
               chr8:8381630-8381444 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               144
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               13, 137
               

               Conread position:
               1-183
               

               Cow position:
               chr8:27361185-27361366 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               14, 43
               

               Conread position:
               1-173
               

               Cow position:
               chr9:1926016-1926194 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               145
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               12, 136
               

               Conread position:
               1-181
               

               Cow position:
               chr9:3879828-3880014 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               12, 137
               

               Conread position:
               1-182
               

               Cow position:
               chr9:8874664-8874847 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               152
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               100, 17
               

               Conread position:
               1-182
               

               Cow position:
               chr9:54499295-54499109 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               148
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               103, 12
               

               Conread position:
               1-183
               

               Cow position:
               chr9:34887354-34887167 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               150
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               15, 137
               

               Conread position:
               1-183
               

               Cow position:
               chr9:53498342-53498148 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               154
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               13, 143
               

               Conread position:
               1-196
               

               Cow position:
               chr9:1836354-1836550 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               13, 108
               

               Conread position:
               2-154
               

               Cow position:
               chr9:7311071-7311229 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               122
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               11, 138
               

               Conread position:
               9-147
               

               Cow position:
               chr9:8936606-8936747 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               113
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               95, 21
               

               Conread position:
               6-108
               

               Cow position:
               chrX:31349667-31349769 (view UCSC Genome Browser custom track)
               

               Alignm length:
               103
               

               Alignm identity:
               83
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               0, 0