Cow genome map

Conread name: rspl32_c12.y1

Conread position: 30-442
Cow position: chr1:28677136-28677541 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 68

Conread position: 30-442
Cow position: chr1:57970530-57970123 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 66

Conread position: 31-441
Cow position: chr1:101130939-101130550 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 295
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 17, 65

Conread position: 31-442
Cow position: chr1:21677868-21678280 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 67

Conread position: 31-442
Cow position: chr1:58197380-58196965 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 297
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 21, 37

Conread position: 31-442
Cow position: chr1:93112299-93111861 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 65

Conread position: 40-442
Cow position: chr1:92279711-92279328 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 281
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 106, 11

Conread position: 50-414
Cow position: chr1:79553587-79553956 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 247, 41

Conread position: 50-442
Cow position: chr1:3339758-3340157 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 43

Conread position: 50-442
Cow position: chr1:33716051-33716449 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 41

Conread position: 51-267
Cow position: chr1:33039940-33039727 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 167
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 40, 0

Conread position: 51-269
Cow position: chr1:57526368-57526583 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 167
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 40, 0

Conread position: 51-282
Cow position: chr1:86363562-86363790 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 170
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 42, 0

Conread position: 51-386
Cow position: chr1:60342143-60342488 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 40

Conread position: 51-411
Cow position: chr1:91902111-91902477 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 51-414
Cow position: chr1:7324163-7324532 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 51-414
Cow position: chr1:8471070-8470701 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 40

Conread position: 51-414
Cow position: chr1:31534944-31535313 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 51-414
Cow position: chr1:73565386-73565017 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 51-420
Cow position: chr1:23040189-23040536 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 317, 19

Conread position: 51-434
Cow position: chr1:20527252-20527641 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 51-435
Cow position: chr1:56205718-56205329 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 51-436
Cow position: chr1:88563819-88563434 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 42

Conread position: 51-442
Cow position: chr1:6197184-6196791 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 42

Conread position: 51-442
Cow position: chr1:10725716-10726111 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 51-442
Cow position: chr1:21377466-21377069 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 42

Conread position: 51-442
Cow position: chr1:22012870-22012474 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 47

Conread position: 51-442
Cow position: chr1:22529710-22529322 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 19

Conread position: 51-442
Cow position: chr1:29037634-29038029 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 51-442
Cow position: chr1:35598718-35598323 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 40

Conread position: 51-442
Cow position: chr1:37542197-37541821 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 49

Conread position: 51-442
Cow position: chr1:49267975-49268368 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 40

Conread position: 51-442
Cow position: chr1:52053913-52054310 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 227, 42

Conread position: 51-442
Cow position: chr1:55044170-55043775 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 42

Conread position: 51-442
Cow position: chr1:55145137-55145534 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 42

Conread position: 51-442
Cow position: chr1:55273950-55273554 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 230, 40

Conread position: 51-442
Cow position: chr1:55779964-55780358 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 42

Conread position: 51-442
Cow position: chr1:57958465-57958067 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 42

Conread position: 51-442
Cow position: chr1:67078732-67078338 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 242, 42

Conread position: 51-442
Cow position: chr1:69769911-69770307 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 51-442
Cow position: chr1:72086689-72087088 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 53

Conread position: 51-442
Cow position: chr1:77104269-77103880 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 35

Conread position: 51-442
Cow position: chr1:78921921-78921525 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 51-442
Cow position: chr1:79589951-79590340 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 40

Conread position: 51-442
Cow position: chr1:82479077-82479471 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 17

Conread position: 51-442
Cow position: chr1:89186359-89185975 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 29

Conread position: 51-442
Cow position: chr1:89493138-89492748 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 51-442
Cow position: chr1:99916532-99916928 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 42

Conread position: 52-414
Cow position: chr1:71559651-71559289 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 39

Conread position: 52-416
Cow position: chr1:99628961-99628613 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 0

Conread position: 52-434
Cow position: chr1:31191327-31190950 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 10

Conread position: 52-435
Cow position: chr1:81302208-81302596 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 41

Conread position: 52-442
Cow position: chr1:76618380-76617986 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 41

Conread position: 53-267
Cow position: chr1:59203169-59202958 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 164
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 38, 0

Conread position: 53-442
Cow position: chr1:29428691-29429093 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 40

Conread position: 53-442
Cow position: chr1:89111926-89112310 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 37

Conread position: 54-431
Cow position: chr1:8528325-8527937 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 27

Conread position: 54-442
Cow position: chr1:77554902-77554515 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 221, 37

Conread position: 56-414
Cow position: chr1:54296046-54295686 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 37

Conread position: 56-442
Cow position: chr1:77165939-77166317 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 264
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 116, 44

Conread position: 57-442
Cow position: chr1:18195710-18196084 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 274
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 218, 36

Conread position: 59-358
Cow position: chr1:98534696-98535001 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 215
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 19, 33

Conread position: 59-406
Cow position: chr1:23098740-23099089 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 242, 34

Conread position: 68-443
Cow position: chr1:11324618-11324979 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 27

Conread position: 75-442
Cow position: chr1:61342586-61342217 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 18

Conread position: 92-276
Cow position: chr1:88676585-88676769 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 137
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 92-414
Cow position: chr1:85795077-85795407 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 0

Conread position: 101-442
Cow position: chr1:33854406-33854755 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 345

Conread position: 114-429
Cow position: chr1:99117166-99117491 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 272

Conread position: 123-417
Cow position: chr1:92553615-92553320 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 209
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 40, 22

Conread position: 123-442
Cow position: chr1:72864110-72864434 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 0

Conread position: 124-415
Cow position: chr1:31400268-31399984 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 212
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 174, 57

Conread position: 152-370
Cow position: chr1:81860320-81860093 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 166
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 123, 0

Conread position: 164-442
Cow position: chr1:40088577-40088865 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 205
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 37, 0

Conread position: 164-442
Cow position: chr1:52371174-52371461 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 207
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 117, 0

Conread position: 167-442
Cow position: chr1:92921031-92920748 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 208
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 108, 279

Conread position: 174-411
Cow position: chr1:64595098-64594852 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 183
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 101, 0

Conread position: 189-442
Cow position: chr1:71690783-71691042 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 184
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 86, 148

Conread position: 200-394
Cow position: chr1:10469084-10468881 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 155
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 75, 134

Conread position: 201-442
Cow position: chr1:79255234-79255473 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 37

Conread position: 202-442
Cow position: chr1:22253313-22253563 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 189
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 12, 165

Conread position: 218-435
Cow position: chr1:26838211-26838437 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 167
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 63, 0

Conread position: 224-442
Cow position: chr1:31352364-31352144 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 166
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 69, 110

Conread position: 225-442
Cow position: chr1:22909132-22909354 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 173
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 50, 209

Conread position: 225-442
Cow position: chr1:73870115-73870343 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 177
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 55, 0

Conread position: 31-442
Cow position: chr10:31375319-31374902 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 54

Conread position: 39-289
Cow position: chr10:6245935-6245692 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 173
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 13, 57

Conread position: 47-265
Cow position: chr10:58687296-58687510 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 161
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 30, 0

Conread position: 49-442
Cow position: chr10:60028842-60029235 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 252, 7

Conread position: 50-331
Cow position: chr10:42460816-42460533 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 20

Conread position: 50-442
Cow position: chr10:2736131-2736529 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 43

Conread position: 50-442
Cow position: chr10:37772995-37773393 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 43

Conread position: 51-267
Cow position: chr10:19330703-19330916 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 51-267
Cow position: chr10:49430773-49430988 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 155
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 45, 140

Conread position: 51-359
Cow position: chr10:46173074-46172767 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 51-369
Cow position: chr10:46241153-46241477 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 229
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 218, 26

Conread position: 51-405
Cow position: chr10:16929281-16929640 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 17

Conread position: 51-414
Cow position: chr10:26765665-26766033 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 51-414
Cow position: chr10:32365056-32365425 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 51-414
Cow position: chr10:45768885-45769247 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 29

Conread position: 51-414
Cow position: chr10:47909734-47910101 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 51-429
Cow position: chr10:2516156-2516534 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 29

Conread position: 51-434
Cow position: chr10:27120792-27120406 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 227, 42

Conread position: 51-434
Cow position: chr10:31733798-31734182 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 42

Conread position: 51-434
Cow position: chr10:38154266-38154657 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 27

Conread position: 51-442
Cow position: chr10:76212-76602 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 42

Conread position: 51-442
Cow position: chr10:5857938-5858335 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 39

Conread position: 51-442
Cow position: chr10:10047425-10047029 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 44

Conread position: 51-442
Cow position: chr10:15888101-15888489 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 37

Conread position: 51-442
Cow position: chr10:23412163-23412560 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 42

Conread position: 51-442
Cow position: chr10:26539792-26539398 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 51-442
Cow position: chr10:30719812-30720209 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 51-442
Cow position: chr10:32282132-32282528 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 17

Conread position: 51-442
Cow position: chr10:32703879-32704276 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 42

Conread position: 51-442
Cow position: chr10:37530686-37530310 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 42

Conread position: 51-442
Cow position: chr10:38941236-38941633 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 45

Conread position: 51-442
Cow position: chr10:39037934-39037537 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 42

Conread position: 51-442
Cow position: chr10:55098827-55098437 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 226, 42

Conread position: 51-442
Cow position: chr10:64347087-64347477 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 42

Conread position: 51-443
Cow position: chr10:30689115-30689515 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 41

Conread position: 52-266
Cow position: chr10:2429403-2429195 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 152
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 41, 0

Conread position: 52-442
Cow position: chr10:23913735-23913341 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 41

Conread position: 52-442
Cow position: chr10:39811393-39810998 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 39

Conread position: 55-442
Cow position: chr10:278235-277844 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 36

Conread position: 56-442
Cow position: chr10:50199105-50199488 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 35

Conread position: 104-441
Cow position: chr10:18886081-18885735 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 252

Conread position: 125-442
Cow position: chr10:11406471-11406782 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 72

Conread position: 181-344
Cow position: chr10:42213706-42213875 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 128
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 97, 19

Conread position: 186-443
Cow position: chr10:60959860-60960126 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 196
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 92, 188

Conread position: 190-442
Cow position: chr10:62405542-62405282 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 182
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 85, 0

Conread position: 201-442
Cow position: chr10:24730-24979 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 183
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 74, 196

Conread position: 203-420
Cow position: chr10:60354404-60354630 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 173
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 70, 0

Conread position: 25-436
Cow position: chr11:57754493-57754075 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 6

Conread position: 31-279
Cow position: chr11:35861919-35861672 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 187
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 96, 21

Conread position: 31-289
Cow position: chr11:8494238-8494493 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 192
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 97, 60

Conread position: 31-441
Cow position: chr11:25809013-25808599 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 67

Conread position: 31-442
Cow position: chr11:1667357-1667773 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 67

Conread position: 50-284
Cow position: chr11:20494349-20494121 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 156
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 43, 0

Conread position: 50-435
Cow position: chr11:15495142-15495533 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 41

Conread position: 50-442
Cow position: chr11:27725147-27724750 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 41

Conread position: 50-442
Cow position: chr11:60824529-60824925 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 41

Conread position: 51-276
Cow position: chr11:13045001-13044793 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 161
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 26, 0

Conread position: 51-299
Cow position: chr11:14734648-14734390 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 195
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 116, 42

Conread position: 51-299
Cow position: chr11:60757219-60756978 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 182
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 42, 0

Conread position: 51-375
Cow position: chr11:52127964-52128295 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 49

Conread position: 51-401
Cow position: chr11:73137346-73137702 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 40

Conread position: 51-411
Cow position: chr11:417718-417351 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 51-411
Cow position: chr11:15835671-15836032 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 51-414
Cow position: chr11:2285468-2285837 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 51-414
Cow position: chr11:12177842-12178212 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 41

Conread position: 51-414
Cow position: chr11:19061319-19060950 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 51-414
Cow position: chr11:35242115-35241745 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 230, 42

Conread position: 51-414
Cow position: chr11:38574728-38574361 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 19

Conread position: 51-414
Cow position: chr11:41314051-41314419 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 51-414
Cow position: chr11:58136472-58136841 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 51-414
Cow position: chr11:61397860-61397497 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 51-442
Cow position: chr11:2835020-2835416 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 250, 26

Conread position: 51-442
Cow position: chr11:9388091-9388489 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 44

Conread position: 51-442
Cow position: chr11:10958586-10958980 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 26

Conread position: 51-442
Cow position: chr11:11990753-11991151 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 42

Conread position: 51-442
Cow position: chr11:17998176-17997783 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 19

Conread position: 51-442
Cow position: chr11:19099731-19099333 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 42

Conread position: 51-442
Cow position: chr11:25759508-25759893 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 0

Conread position: 51-442
Cow position: chr11:30255185-30255590 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 0

Conread position: 51-442
Cow position: chr11:35142577-35142181 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 51-442
Cow position: chr11:40486913-40487305 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 43

Conread position: 51-442
Cow position: chr11:44106431-44106834 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 45

Conread position: 51-442
Cow position: chr11:44254829-44255225 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 42

Conread position: 51-442
Cow position: chr11:51034044-51034427 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 51-442
Cow position: chr11:61426449-61426826 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 40

Conread position: 51-442
Cow position: chr11:74928558-74928948 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 53

Conread position: 51-443
Cow position: chr11:82346385-82345976 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 49

Conread position: 52-411
Cow position: chr11:84966870-84967229 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 39

Conread position: 55-442
Cow position: chr11:26593018-26592626 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 36

Conread position: 55-442
Cow position: chr11:39151357-39151751 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 38

Conread position: 72-442
Cow position: chr11:3238077-3238453 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 19

Conread position: 72-442
Cow position: chr11:83000805-83001180 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 19

Conread position: 101-434
Cow position: chr11:13062605-13062263 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 207
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 175, 0

Conread position: 103-442
Cow position: chr11:74990424-74990772 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 0

Conread position: 106-442
Cow position: chr11:46781261-46780918 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 96

Conread position: 114-442
Cow position: chr11:23494566-23494897 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 261

Conread position: 116-442
Cow position: chr11:7229177-7229512 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 0

Conread position: 116-442
Cow position: chr11:46583591-46583260 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 229
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 159, 94

Conread position: 133-412
Cow position: chr11:44875312-44875599 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 191
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 144, 59

Conread position: 134-442
Cow position: chr11:15988123-15988439 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 312

Conread position: 186-442
Cow position: chr11:56227816-56228081 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 199
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 92, 152

Conread position: 209-442
Cow position: chr11:21372171-21371929 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 178
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 66, 0

Conread position: 14-267
Cow position: chr12:34176367-34176616 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 184
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 37, 0

Conread position: 30-442
Cow position: chr12:26823145-26823553 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 276
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 9, 43

Conread position: 31-278
Cow position: chr12:19861700-19861932 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 179
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 21, 72

Conread position: 31-441
Cow position: chr12:8773679-8774098 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 67

Conread position: 31-442
Cow position: chr12:25313700-25313278 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 68

Conread position: 51-267
Cow position: chr12:29128323-29128111 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 168
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 40, 0

Conread position: 51-267
Cow position: chr12:45145091-45145304 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 165
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 40, 0

Conread position: 51-364
Cow position: chr12:42232348-42232667 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 42

Conread position: 51-399
Cow position: chr12:1407870-1408210 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 244
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 224, 42

Conread position: 51-414
Cow position: chr12:23138290-23137921 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 51-414
Cow position: chr12:35548088-35547724 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 51-414
Cow position: chr12:46112079-46111710 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 51-442
Cow position: chr12:10931124-10931521 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 230, 42

Conread position: 51-442
Cow position: chr12:12755116-12754722 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 25

Conread position: 51-442
Cow position: chr12:18585711-18586108 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 42

Conread position: 51-442
Cow position: chr12:25266294-25265899 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 51-442
Cow position: chr12:41338192-41337797 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 19

Conread position: 51-442
Cow position: chr12:43681043-43681440 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 42

Conread position: 51-443
Cow position: chr12:8839291-8839690 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 39

Conread position: 52-414
Cow position: chr12:14423389-14423757 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 39

Conread position: 53-442
Cow position: chr12:30501681-30502068 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 251, 40

Conread position: 55-442
Cow position: chr12:30141472-30141852 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 261
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 28, 15

Conread position: 72-414
Cow position: chr12:22517792-22517447 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 19

Conread position: 72-442
Cow position: chr12:5226308-5226669 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 261
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 203, 21

Conread position: 108-443
Cow position: chr12:5165474-5165822 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 238
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 11, 46

Conread position: 117-442
Cow position: chr12:36213380-36213713 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 64

Conread position: 187-392
Cow position: chr12:18936000-18936214 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 154
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 88, 0

Conread position: 189-386
Cow position: chr12:41595396-41595601 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 154
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 50, 34

Conread position: 255-442
Cow position: chr12:19872824-19873004 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 136
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 45, 0

Conread position: 30-436
Cow position: chr13:18097818-18097401 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 68

Conread position: 30-442
Cow position: chr13:34051426-34051846 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 67

Conread position: 30-442
Cow position: chr13:44324157-44323738 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 68

Conread position: 51-267
Cow position: chr13:3651613-3651401 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 51-267
Cow position: chr13:30306016-30306229 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 164
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 42, 0

Conread position: 51-274
Cow position: chr13:34322144-34321930 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 168
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 40, 0

Conread position: 51-382
Cow position: chr13:19566550-19566888 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 40

Conread position: 51-394
Cow position: chr13:46427552-46427899 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 233, 18

Conread position: 51-403
Cow position: chr13:504164-504522 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 51-410
Cow position: chr13:19843304-19843669 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 229, 29

Conread position: 51-414
Cow position: chr13:3657520-3657151 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 51-414
Cow position: chr13:6719334-6718965 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 51-414
Cow position: chr13:11390088-11390457 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 51-414
Cow position: chr13:50112296-50112665 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 251, 40

Conread position: 51-419
Cow position: chr13:50079737-50079364 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 42

Conread position: 51-426
Cow position: chr13:5622869-5622500 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 42

Conread position: 51-442
Cow position: chr13:6665298-6664901 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 227, 42

Conread position: 51-442
Cow position: chr13:11826922-11826536 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 42

Conread position: 51-442
Cow position: chr13:22084606-22084998 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 42

Conread position: 51-442
Cow position: chr13:49976500-49976896 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 52-412
Cow position: chr13:32955630-32955263 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 41

Conread position: 57-441
Cow position: chr13:21764189-21764564 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 258
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 45, 13

Conread position: 101-443
Cow position: chr13:33161818-33162169 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 296

Conread position: 108-407
Cow position: chr13:38897198-38897511 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 0

Conread position: 120-343
Cow position: chr13:18987731-18987506 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 170
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 155, 20

Conread position: 128-442
Cow position: chr13:46488976-46488669 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 38

Conread position: 137-442
Cow position: chr13:1461619-1461307 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 217
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 138, 213

Conread position: 149-267
Cow position: chr13:36672631-36672749 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 176-435
Cow position: chr13:21134686-21134951 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 185
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 104, 14

Conread position: 178-442
Cow position: chr13:9537195-9537468 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 199
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 103, 0

Conread position: 234-442
Cow position: chr13:47189027-47189243 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 171
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 39, 109

Conread position: 31-354
Cow position: chr14:36710387-36710054 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 235
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 16, 66

Conread position: 31-442
Cow position: chr14:28116733-28117154 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 36

Conread position: 50-277
Cow position: chr14:46123818-46124032 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 166
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 20, 0

Conread position: 50-442
Cow position: chr14:32449668-32450053 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 226, 43

Conread position: 50-442
Cow position: chr14:40968854-40969251 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 41

Conread position: 51-287
Cow position: chr14:25694761-25694991 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 165
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 74, 28

Conread position: 51-298
Cow position: chr14:42150174-42150418 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 167
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 227, 42

Conread position: 51-350
Cow position: chr14:50114067-50114371 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 38

Conread position: 51-412
Cow position: chr14:28350998-28350631 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 38

Conread position: 51-414
Cow position: chr14:16997338-16996969 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 42

Conread position: 51-414
Cow position: chr14:38459452-38459086 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 19

Conread position: 51-414
Cow position: chr14:46636835-46636472 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 230, 40

Conread position: 51-415
Cow position: chr14:19489681-19490049 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 249, 42

Conread position: 51-440
Cow position: chr14:13581570-13581964 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 42

Conread position: 51-441
Cow position: chr14:26449816-26449428 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 250, 42

Conread position: 51-442
Cow position: chr14:10310259-10310656 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 42

Conread position: 51-442
Cow position: chr14:13619730-13619348 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 269
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 171, 42

Conread position: 51-442
Cow position: chr14:22027072-22026678 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 242, 42

Conread position: 51-442
Cow position: chr14:46960087-46960483 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 51-442
Cow position: chr14:50069492-50069101 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 42

Conread position: 62-266
Cow position: chr14:39773281-39773483 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 144
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 121, 31

Conread position: 72-414
Cow position: chr14:9482672-9483020 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 19

Conread position: 85-442
Cow position: chr14:24980278-24980644 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 0

Conread position: 101-336
Cow position: chr14:45789718-45789952 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 166
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 174, 191

Conread position: 101-442
Cow position: chr14:5500675-5501024 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 97

Conread position: 106-359
Cow position: chr14:44888283-44888025 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 186
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 180, 207

Conread position: 115-442
Cow position: chr14:45847920-45848253 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 22

Conread position: 123-443
Cow position: chr14:29340791-29341110 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 224
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 162, 43

Conread position: 125-435
Cow position: chr14:24797919-24797600 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 0

Conread position: 152-442
Cow position: chr14:20786182-20786479 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 211
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 122, 243

Conread position: 152-442
Cow position: chr14:38046978-38047272 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 140

Conread position: 158-443
Cow position: chr14:32580086-32580375 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 206
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 141, 43

Conread position: 171-442
Cow position: chr14:50142206-50141927 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 195
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 120, 0

Conread position: 186-442
Cow position: chr14:32500004-32500257 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 182
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 89, 188

Conread position: 187-419
Cow position: chr14:46752752-46752517 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 170
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 101, 189

Conread position: 194-442
Cow position: chr14:34354390-34354646 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 193
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 86, 187

Conread position: 201-442
Cow position: chr14:45066814-45067057 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 183
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 88, 38

Conread position: 207-442
Cow position: chr14:24895524-24895768 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 170
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 68, 0

Conread position: 31-276
Cow position: chr15:502991-503238 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 175
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 21, 67

Conread position: 31-276
Cow position: chr15:4917866-4918111 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 179
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 16, 48

Conread position: 31-390
Cow position: chr15:29899017-29899380 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 67

Conread position: 31-423
Cow position: chr15:35416275-35416672 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 63

Conread position: 31-441
Cow position: chr15:6281331-6281743 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 70

Conread position: 31-443
Cow position: chr15:336371-336782 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 64

Conread position: 33-299
Cow position: chr15:8696947-8696689 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 199
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 19, 42

Conread position: 35-436
Cow position: chr15:22712416-22712823 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 10

Conread position: 40-434
Cow position: chr15:44364665-44364264 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 56

Conread position: 50-365
Cow position: chr15:7547572-7547891 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 231, 43

Conread position: 50-414
Cow position: chr15:6658413-6658040 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 41

Conread position: 50-442
Cow position: chr15:13076222-13076620 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 43

Conread position: 50-442
Cow position: chr15:32876735-32877114 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 259
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 251, 46

Conread position: 51-267
Cow position: chr15:23797832-23798049 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 167
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 101, 42

Conread position: 51-342
Cow position: chr15:42943902-42943611 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 230, 40

Conread position: 51-355
Cow position: chr15:37394433-37394744 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 230
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 150, 42

Conread position: 51-363
Cow position: chr15:4727876-4728186 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 231
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 224, 19

Conread position: 51-391
Cow position: chr15:31585694-31585348 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 51-414
Cow position: chr15:44177-44543 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 42

Conread position: 51-414
Cow position: chr15:1785470-1785839 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 51-414
Cow position: chr15:2644642-2644275 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 51-414
Cow position: chr15:7565707-7566076 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 51-414
Cow position: chr15:18265057-18264688 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 42

Conread position: 51-414
Cow position: chr15:26591642-26591274 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 51-432
Cow position: chr15:32491184-32490799 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 42

Conread position: 51-442
Cow position: chr15:2899554-2899157 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 42

Conread position: 51-442
Cow position: chr15:3721428-3721039 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 40

Conread position: 51-442
Cow position: chr15:4629532-4629145 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 230, 42

Conread position: 51-442
Cow position: chr15:17237183-17236783 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 282
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 112, 40

Conread position: 51-442
Cow position: chr15:20353098-20352704 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 264
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 107, 42

Conread position: 51-442
Cow position: chr15:23774010-23774397 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 233, 40

Conread position: 51-442
Cow position: chr15:36329756-36329360 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 51-442
Cow position: chr15:36670880-36671262 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 250, 42

Conread position: 51-442
Cow position: chr15:36940678-36940282 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 232, 40

Conread position: 51-443
Cow position: chr15:2080035-2080433 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 42

Conread position: 53-442
Cow position: chr15:39091487-39091107 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 272
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 225, 13

Conread position: 72-414
Cow position: chr15:1129266-1128918 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 245
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 206, 21

Conread position: 101-414
Cow position: chr15:3792828-3793159 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 235
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 93, 0

Conread position: 101-427
Cow position: chr15:15262930-15262613 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 230
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 199, 70

Conread position: 116-442
Cow position: chr15:43266872-43267200 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 234

Conread position: 125-310
Cow position: chr15:6482253-6482444 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 143
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 59, 68

Conread position: 133-410
Cow position: chr15:38937551-38937835 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 204
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 142, 0

Conread position: 134-442
Cow position: chr15:14756965-14757283 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 226

Conread position: 148-441
Cow position: chr15:20348465-20348168 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 75

Conread position: 161-442
Cow position: chr15:4769315-4769605 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 202
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 117, 0

Conread position: 166-442
Cow position: chr15:5197771-5198056 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 205
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 109, 231

Conread position: 175-442
Cow position: chr15:4712732-4713008 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 193
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 100, 0

Conread position: 182-436
Cow position: chr15:37770231-37769970 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 193
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 118, 10

Conread position: 186-441
Cow position: chr15:22855720-22855456 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 0

Conread position: 31-359
Cow position: chr16:340113-340442 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 67

Conread position: 31-385
Cow position: chr16:43485-43856 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 88

Conread position: 31-436
Cow position: chr16:41624346-41623943 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 44

Conread position: 50-414
Cow position: chr16:14100207-14100577 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 43

Conread position: 51-267
Cow position: chr16:28167962-28167749 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 164
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 40, 0

Conread position: 51-273
Cow position: chr16:20642847-20643063 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 166
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 42, 0

Conread position: 51-414
Cow position: chr16:2408538-2408167 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 42

Conread position: 51-414
Cow position: chr16:19081408-19081771 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 51-414
Cow position: chr16:27593466-27593097 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 51-414
Cow position: chr16:42210852-42211221 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 40

Conread position: 51-435
Cow position: chr16:18975225-18975614 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 51-442
Cow position: chr16:5416911-5416523 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 42

Conread position: 51-442
Cow position: chr16:7154956-7155353 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 42

Conread position: 51-442
Cow position: chr16:7303112-7303508 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 51-442
Cow position: chr16:10440595-10440992 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 45

Conread position: 51-442
Cow position: chr16:15812424-15812834 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 51-442
Cow position: chr16:15980022-15979625 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 42

Conread position: 51-442
Cow position: chr16:24210041-24209646 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 19

Conread position: 51-442
Cow position: chr16:25444234-25444629 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 42

Conread position: 51-442
Cow position: chr16:26627108-26627505 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 51-442
Cow position: chr16:26990584-26990188 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 38

Conread position: 51-442
Cow position: chr16:40293814-40293417 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 42

Conread position: 51-442
Cow position: chr16:43894906-43894508 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 42

Conread position: 51-442
Cow position: chr16:45608771-45609162 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 42

Conread position: 51-442
Cow position: chr16:47772617-47773017 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 45

Conread position: 51-442
Cow position: chr16:53612161-53612554 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 233, 42

Conread position: 51-443
Cow position: chr16:20204359-20204753 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 43

Conread position: 52-267
Cow position: chr16:3011195-3011407 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 167
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 39, 0

Conread position: 52-442
Cow position: chr16:16095556-16095951 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 228, 41

Conread position: 52-442
Cow position: chr16:21017916-21018312 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 41

Conread position: 53-414
Cow position: chr16:13722231-13721864 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 12

Conread position: 53-429
Cow position: chr16:658319-658690 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 40

Conread position: 97-442
Cow position: chr16:28268316-28267963 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 200

Conread position: 126-423
Cow position: chr16:18425833-18426140 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 40

Conread position: 152-442
Cow position: chr16:5488325-5488624 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 0

Conread position: 164-442
Cow position: chr16:38177237-38177518 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 203
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 38, 28

Conread position: 176-442
Cow position: chr16:50190636-50190365 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 201
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 98, 198

Conread position: 186-442
Cow position: chr16:24637026-24636762 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 189
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 89, 260

Conread position: 209-435
Cow position: chr16:48371592-48371357 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 170
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 69, 0

Conread position: 14-441
Cow position: chr17:18241882-18242292 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 260, 13

Conread position: 14-442
Cow position: chr17:138493-138915 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 261, 37

Conread position: 25-442
Cow position: chr17:13707631-13708018 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 6

Conread position: 28-443
Cow position: chr17:1654875-1654449 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 70

Conread position: 31-441
Cow position: chr17:20094265-20093848 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 54

Conread position: 31-442
Cow position: chr17:4210820-4211242 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 67

Conread position: 31-442
Cow position: chr17:20214982-20215396 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 65

Conread position: 31-442
Cow position: chr17:27978010-27978416 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 229, 23

Conread position: 33-442
Cow position: chr17:6081402-6081803 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 271
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 19, 53

Conread position: 50-267
Cow position: chr17:13930813-13931024 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 171
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 43, 0

Conread position: 50-441
Cow position: chr17:145277-144895 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 8

Conread position: 51-411
Cow position: chr17:15808903-15809269 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 230, 40

Conread position: 51-414
Cow position: chr17:1970067-1970436 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 51-414
Cow position: chr17:4480966-4480598 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 51-414
Cow position: chr17:23321504-23321135 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 44

Conread position: 51-416
Cow position: chr17:2178780-2179129 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 40

Conread position: 51-416
Cow position: chr17:20055053-20055405 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 250, 44

Conread position: 51-424
Cow position: chr17:40810667-40811042 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 42

Conread position: 51-442
Cow position: chr17:184063-184459 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 51-442
Cow position: chr17:4084984-4085376 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 42

Conread position: 51-442
Cow position: chr17:6262772-6263167 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 42

Conread position: 51-442
Cow position: chr17:15438709-15439103 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 51-442
Cow position: chr17:18100158-18099761 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 42

Conread position: 51-442
Cow position: chr17:20084895-20084498 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 18

Conread position: 51-442
Cow position: chr17:25739220-25739609 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 42

Conread position: 51-442
Cow position: chr17:43991405-43991797 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 266
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 224, 42

Conread position: 52-414
Cow position: chr17:2245141-2244787 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 255
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 223, 48

Conread position: 52-442
Cow position: chr17:18591340-18591723 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 41

Conread position: 52-442
Cow position: chr17:34236334-34235939 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 39

Conread position: 53-414
Cow position: chr17:2176901-2177264 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 16

Conread position: 55-414
Cow position: chr17:27791853-27791503 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 6

Conread position: 55-442
Cow position: chr17:19234703-19235083 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 246, 38

Conread position: 60-426
Cow position: chr17:18777905-18777531 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 31

Conread position: 73-412
Cow position: chr17:14213078-14212736 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 18

Conread position: 90-381
Cow position: chr17:28024950-28024650 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 176
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 185, 0

Conread position: 115-343
Cow position: chr17:15364153-15364374 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 173
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 180, 51

Conread position: 123-442
Cow position: chr17:2583377-2583700 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 251

Conread position: 123-442
Cow position: chr17:34000397-34000061 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 238
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 21, 130

Conread position: 125-411
Cow position: chr17:1672287-1672580 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 56

Conread position: 147-442
Cow position: chr17:21666013-21666312 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 0

Conread position: 177-414
Cow position: chr17:38991792-38992037 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 179
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 106, 0

Conread position: 25-359
Cow position: chr18:32859913-32859570 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 233
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 27, 6

Conread position: 27-321
Cow position: chr18:25848306-25848013 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 206
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 23, 71

Conread position: 31-441
Cow position: chr18:42080910-42080492 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 67

Conread position: 31-442
Cow position: chr18:15688148-15688538 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 66

Conread position: 33-441
Cow position: chr18:43285190-43284784 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 49

Conread position: 50-401
Cow position: chr18:27539571-27539927 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 27

Conread position: 50-442
Cow position: chr18:5536111-5536509 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 41

Conread position: 51-414
Cow position: chr18:18215877-18215505 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 40

Conread position: 51-414
Cow position: chr18:19355654-19356021 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 51-414
Cow position: chr18:29071561-29071929 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 38

Conread position: 51-414
Cow position: chr18:37732829-37733197 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 51-442
Cow position: chr18:14419117-14419513 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 32

Conread position: 51-442
Cow position: chr18:16173473-16173077 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 51-442
Cow position: chr18:21174947-21175346 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 47

Conread position: 51-442
Cow position: chr18:23688311-23688707 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 51-442
Cow position: chr18:27989896-27990293 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 42

Conread position: 51-442
Cow position: chr18:37509108-37509498 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 42

Conread position: 51-442
Cow position: chr18:40195252-40195648 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 37

Conread position: 51-442
Cow position: chr18:40484140-40484535 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 32

Conread position: 51-442
Cow position: chr18:47744892-47745288 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 52-435
Cow position: chr18:28969149-28968760 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 41

Conread position: 52-441
Cow position: chr18:30877130-30876738 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 37

Conread position: 65-414
Cow position: chr18:16463493-16463138 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 26

Conread position: 118-441
Cow position: chr18:54462737-54463042 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 213
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 153, 53

Conread position: 149-267
Cow position: chr18:17381047-17381165 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 98
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 149-414
Cow position: chr18:29078971-29079245 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 0

Conread position: 152-442
Cow position: chr18:23716421-23716127 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 29

Conread position: 161-354
Cow position: chr18:19468778-19468980 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 140
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 114, 0

Conread position: 161-414
Cow position: chr18:19461526-19461788 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 189
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 114, 0

Conread position: 189-442
Cow position: chr18:16025385-16025121 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 192
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 33, 0

Conread position: 234-442
Cow position: chr18:46869475-46869684 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 160
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 40, 61

Conread position: 31-428
Cow position: chr19:48477694-48478090 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 67

Conread position: 31-442
Cow position: chr19:743580-743174 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 65

Conread position: 32-314
Cow position: chr19:47189323-47189043 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 72

Conread position: 33-355
Cow position: chr19:730867-730539 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 231
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 19, 52

Conread position: 41-442
Cow position: chr19:42648245-42647838 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 287
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 131, 30

Conread position: 50-442
Cow position: chr19:48533872-48534267 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 43

Conread position: 51-269
Cow position: chr19:16478721-16478507 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 170
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 40, 0

Conread position: 51-424
Cow position: chr19:4388728-4389102 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 242, 42

Conread position: 51-442
Cow position: chr19:402393-402776 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 235, 29

Conread position: 51-442
Cow position: chr19:5902172-5902568 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 51-442
Cow position: chr19:7345179-7345559 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 51-442
Cow position: chr19:7491243-7491632 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 15

Conread position: 51-442
Cow position: chr19:16317063-16316678 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 40

Conread position: 51-442
Cow position: chr19:55164512-55164116 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 53-442
Cow position: chr19:45464294-45464675 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 40

Conread position: 56-442
Cow position: chr19:20672430-20672053 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 22

Conread position: 78-314
Cow position: chr19:25571987-25571755 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 164
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 197, 18

Conread position: 83-442
Cow position: chr19:929998-930361 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 10

Conread position: 118-442
Cow position: chr19:2019549-2019227 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 61

Conread position: 123-442
Cow position: chr19:12652084-12652417 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 0

Conread position: 125-442
Cow position: chr19:44839954-44839645 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 224
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 51, 231

Conread position: 151-426
Cow position: chr19:23488003-23488286 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 67

Conread position: 152-411
Cow position: chr19:28610620-28610879 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 177
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 123, 71

Conread position: 172-441
Cow position: chr19:35783132-35782856 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 206
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 14, 5

Conread position: 215-442
Cow position: chr19:15720567-15720345 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 165
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 63, 84

Conread position: 226-442
Cow position: chr19:6555938-6556163 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 169
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 54, 0

Conread position: 227-427
Cow position: chr19:50020644-50020436 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 159
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 51, 0

Conread position: 31-411
Cow position: chr2:48360511-48360902 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 67

Conread position: 32-416
Cow position: chr2:19213198-19212814 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 66

Conread position: 32-440
Cow position: chr2:62819914-62819498 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 66

Conread position: 32-441
Cow position: chr2:43878472-43878886 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 65

Conread position: 50-276
Cow position: chr2:10657253-10657036 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 165
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 43, 0

Conread position: 50-375
Cow position: chr2:6965515-6965838 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 43

Conread position: 50-435
Cow position: chr2:2181682-2181294 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 41

Conread position: 51-288
Cow position: chr2:2772314-2772550 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 178
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 220, 42

Conread position: 51-361
Cow position: chr2:53030680-53030997 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 42

Conread position: 51-363
Cow position: chr2:39424521-39424835 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 51-380
Cow position: chr2:43757053-43756727 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 231
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 224, 40

Conread position: 51-412
Cow position: chr2:9187289-9186930 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 51-414
Cow position: chr2:2410252-2409888 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 51-414
Cow position: chr2:4805150-4804781 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 51-414
Cow position: chr2:4917480-4917111 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 51-414
Cow position: chr2:9714259-9714622 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 51-414
Cow position: chr2:26905836-26906205 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 51-414
Cow position: chr2:30379866-30380233 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 42

Conread position: 51-414
Cow position: chr2:70669299-70669665 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 51-423
Cow position: chr2:34502358-34502724 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 29

Conread position: 51-424
Cow position: chr2:50980566-50980197 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 42

Conread position: 51-435
Cow position: chr2:39119191-39119581 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 51-435
Cow position: chr2:53542529-53542918 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 26

Conread position: 51-442
Cow position: chr2:383530-383135 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 278
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 229, 19

Conread position: 51-442
Cow position: chr2:2603252-2603647 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 45

Conread position: 51-442
Cow position: chr2:6004246-6003850 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 42

Conread position: 51-442
Cow position: chr2:7370258-7370653 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 42

Conread position: 51-442
Cow position: chr2:16718314-16717917 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 8

Conread position: 51-442
Cow position: chr2:18021318-18020928 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 40

Conread position: 51-442
Cow position: chr2:20870304-20869917 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 230, 19

Conread position: 51-442
Cow position: chr2:43209729-43210116 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 42

Conread position: 51-442
Cow position: chr2:46182946-46182550 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 42

Conread position: 51-442
Cow position: chr2:52621365-52621760 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 40

Conread position: 51-442
Cow position: chr2:53332392-53332790 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 42

Conread position: 51-442
Cow position: chr2:57937985-57938381 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 51-442
Cow position: chr2:73992313-73992711 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 31

Conread position: 51-442
Cow position: chr2:74761469-74761872 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 42

Conread position: 51-442
Cow position: chr2:77858919-77859305 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 52-288
Cow position: chr2:11694933-11695161 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 163
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 226, 39

Conread position: 52-414
Cow position: chr2:9962480-9962112 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 39

Conread position: 52-442
Cow position: chr2:28796435-28796831 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 51

Conread position: 53-277
Cow position: chr2:56798731-56798511 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 164
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 40, 0

Conread position: 53-435
Cow position: chr2:57338546-57338934 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 38

Conread position: 55-348
Cow position: chr2:23492388-23492684 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 202
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 223, 15

Conread position: 55-434
Cow position: chr2:53174919-53175302 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 49

Conread position: 56-442
Cow position: chr2:41156766-41157164 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 287

Conread position: 101-417
Cow position: chr2:52170037-52170352 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 202

Conread position: 102-414
Cow position: chr2:9910916-9911236 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 312

Conread position: 118-442
Cow position: chr2:13603015-13603344 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 63

Conread position: 122-442
Cow position: chr2:29610476-29610754 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 229
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 160, 25

Conread position: 123-396
Cow position: chr2:38375827-38376112 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 205
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 39, 82

Conread position: 125-442
Cow position: chr2:50417672-50417993 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 84

Conread position: 133-442
Cow position: chr2:32417953-32417645 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 221
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 145, 241

Conread position: 149-442
Cow position: chr2:27146424-27146122 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 213
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 133, 233

Conread position: 152-442
Cow position: chr2:17941365-17941064 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 154-442
Cow position: chr2:30909189-30909484 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 0

Conread position: 163-424
Cow position: chr2:78301697-78301431 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 192
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 120, 232

Conread position: 164-442
Cow position: chr2:67418068-67417785 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 204
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 115, 279

Conread position: 172-442
Cow position: chr2:50406819-50407088 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 194
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 10, 64

Conread position: 178-414
Cow position: chr2:9956517-9956272 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 176
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 97, 0

Conread position: 201-442
Cow position: chr2:46940248-46940011 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 0

Conread position: 202-442
Cow position: chr2:41046126-41045882 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 172
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 73, 240

Conread position: 206-442
Cow position: chr2:943769-943995 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 178
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 95, 183

Conread position: 31-442
Cow position: chr20:8445496-8445917 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 73

Conread position: 31-442
Cow position: chr20:25658940-25658518 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 67

Conread position: 50-442
Cow position: chr20:12332791-12333180 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 234, 43

Conread position: 51-345
Cow position: chr20:39234339-39234639 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 216
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 218, 40

Conread position: 51-360
Cow position: chr20:7810732-7810419 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 51-414
Cow position: chr20:30146543-30146908 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 51-414
Cow position: chr20:30431380-30431756 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 51-435
Cow position: chr20:13766001-13766389 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 236, 42

Conread position: 51-436
Cow position: chr20:9996642-9997035 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 230, 45

Conread position: 51-441
Cow position: chr20:13050464-13050054 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 35

Conread position: 51-442
Cow position: chr20:825888-826284 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 51-442
Cow position: chr20:5538290-5538649 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 267
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 224, 39

Conread position: 51-442
Cow position: chr20:6550890-6550493 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 42

Conread position: 51-442
Cow position: chr20:14757162-14756751 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 42

Conread position: 51-442
Cow position: chr20:27994418-27994020 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 44

Conread position: 51-442
Cow position: chr20:37154859-37154462 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 37

Conread position: 52-442
Cow position: chr20:2682342-2682717 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 299, 41

Conread position: 52-442
Cow position: chr20:9536014-9536399 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 241, 41

Conread position: 52-442
Cow position: chr20:12177381-12176986 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 39

Conread position: 53-267
Cow position: chr20:28247140-28246929 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 166
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 38, 0

Conread position: 104-435
Cow position: chr20:7512777-7512439 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 239
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 165, 104

Conread position: 139-436
Cow position: chr20:19352877-19352577 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 218
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 132, 254

Conread position: 155-395
Cow position: chr20:39284376-39284618 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 168
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 123, 184

Conread position: 157-442
Cow position: chr20:5958934-5958640 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 207
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 112, 0

Conread position: 186-442
Cow position: chr20:30996644-30996908 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 170
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 97, 0

Conread position: 241-442
Cow position: chr20:10839161-10838959 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 155
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 40, 130

Conread position: 29-419
Cow position: chr21:14726882-14727276 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 69

Conread position: 31-414
Cow position: chr21:33710306-33709913 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 73

Conread position: 31-437
Cow position: chr21:4097769-4098183 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 67

Conread position: 31-442
Cow position: chr21:37298353-37298754 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 67

Conread position: 31-443
Cow position: chr21:3252813-3253250 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 69

Conread position: 40-424
Cow position: chr21:18792241-18791835 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 54

Conread position: 50-442
Cow position: chr21:4898746-4898350 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 46

Conread position: 50-442
Cow position: chr21:22463408-22463806 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 228, 43

Conread position: 51-267
Cow position: chr21:10042582-10042795 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 163
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 42, 0

Conread position: 51-414
Cow position: chr21:39428620-39428989 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 51-442
Cow position: chr21:1195757-1196152 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 42

Conread position: 51-442
Cow position: chr21:3781991-3782387 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 42

Conread position: 51-442
Cow position: chr21:5020364-5020757 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 42

Conread position: 51-442
Cow position: chr21:6966254-6965857 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 42

Conread position: 51-442
Cow position: chr21:9895581-9895972 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 13

Conread position: 51-442
Cow position: chr21:11509159-11509555 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 51-442
Cow position: chr21:22855132-22855513 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 27

Conread position: 51-442
Cow position: chr21:36534990-36534593 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 42

Conread position: 51-442
Cow position: chr21:37923405-37923791 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 42

Conread position: 51-442
Cow position: chr21:42917012-42917407 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 34

Conread position: 52-276
Cow position: chr21:6864332-6864120 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 163
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 7, 0

Conread position: 52-394
Cow position: chr21:3804561-3804214 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 41

Conread position: 64-443
Cow position: chr21:28597823-28598206 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 29

Conread position: 101-414
Cow position: chr21:19627442-19627121 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 80

Conread position: 101-442
Cow position: chr21:27375370-27375721 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 0

Conread position: 135-349
Cow position: chr21:8419356-8419573 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 164
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 140, 0

Conread position: 151-349
Cow position: chr21:15398448-15398653 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 152
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 124, 193

Conread position: 154-442
Cow position: chr21:13302524-13302810 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 214
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 70, 141

Conread position: 161-442
Cow position: chr21:32573304-32573596 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 164-344
Cow position: chr21:39763549-39763739 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 136
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 116, 0

Conread position: 181-443
Cow position: chr21:33934560-33934298 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 170
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 94, 111

Conread position: 186-442
Cow position: chr21:28476652-28476908 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 192
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 89, 205

Conread position: 218-442
Cow position: chr21:9208695-9208924 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 158
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 57, 74

Conread position: 25-282
Cow position: chr22:22862604-22862864 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 194
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 7, 54

Conread position: 31-264
Cow position: chr22:45353844-45354073 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 177
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 23, 64

Conread position: 31-302
Cow position: chr22:27320675-27320944 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 204
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 20, 67

Conread position: 31-442
Cow position: chr22:40589411-40589847 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 67

Conread position: 32-335
Cow position: chr22:3303640-3303338 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 65

Conread position: 50-441
Cow position: chr22:32220504-32220893 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 251, 43

Conread position: 51-276
Cow position: chr22:29185076-29184853 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 158
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 27, 43

Conread position: 51-276
Cow position: chr22:34615085-34615307 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 159
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 42, 0

Conread position: 51-358
Cow position: chr22:40326340-40326650 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 42

Conread position: 51-411
Cow position: chr22:540180-540546 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 51-414
Cow position: chr22:30675682-30675314 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 40

Conread position: 51-420
Cow position: chr22:30918135-30918502 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 250, 42

Conread position: 51-430
Cow position: chr22:36584584-36584204 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 227, 42

Conread position: 51-440
Cow position: chr22:44925282-44924891 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 41

Conread position: 51-442
Cow position: chr22:9728928-9728540 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 42

Conread position: 51-442
Cow position: chr22:15308918-15308520 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 230, 42

Conread position: 51-442
Cow position: chr22:18603766-18603369 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 42

Conread position: 51-442
Cow position: chr22:21592468-21592865 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 230, 45

Conread position: 51-442
Cow position: chr22:22107088-22107483 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 51-442
Cow position: chr22:25336196-25336592 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 34

Conread position: 51-442
Cow position: chr22:28785165-28785553 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 242, 14

Conread position: 51-442
Cow position: chr22:31315589-31315985 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 35

Conread position: 51-443
Cow position: chr22:10313676-10314068 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 227, 42

Conread position: 53-442
Cow position: chr22:32209654-32210054 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 40

Conread position: 55-363
Cow position: chr22:21957216-21957512 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 207
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 25, 0

Conread position: 55-442
Cow position: chr22:288582-288193 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 231, 38

Conread position: 55-442
Cow position: chr22:5015136-5015531 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 49

Conread position: 72-414
Cow position: chr22:10549932-10550280 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 19

Conread position: 72-419
Cow position: chr22:41387465-41387827 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 252
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 224, 24

Conread position: 92-442
Cow position: chr22:32812128-32811770 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 354

Conread position: 101-441
Cow position: chr22:1035971-1036320 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 0

Conread position: 105-434
Cow position: chr22:36207802-36208129 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 259

Conread position: 116-432
Cow position: chr22:36503594-36503273 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 221
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 162, 0

Conread position: 124-442
Cow position: chr22:10160839-10161173 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 236
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 84, 288

Conread position: 135-442
Cow position: chr22:27223711-27223399 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 243

Conread position: 150-442
Cow position: chr22:26759106-26759402 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 121

Conread position: 151-442
Cow position: chr22:15918745-15918458 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 205
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 131, 0

Conread position: 200-442
Cow position: chr22:6924233-6924473 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 165
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 93, 0

Conread position: 202-442
Cow position: chr22:981515-981763 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 177
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 73, 244

Conread position: 218-442
Cow position: chr22:14807463-14807695 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 163
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 57, 228

Conread position: 244-442
Cow position: chr22:5929659-5929460 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 159
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 0

Conread position: 31-427
Cow position: chr23:25670744-25670364 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 272
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 246, 13

Conread position: 31-442
Cow position: chr23:20171184-20170771 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 67

Conread position: 50-298
Cow position: chr23:16611773-16611524 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 180
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 151, 43

Conread position: 51-267
Cow position: chr23:2737260-2737473 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 161
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 38, 0

Conread position: 51-360
Cow position: chr23:2720494-2720807 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 42

Conread position: 51-414
Cow position: chr23:609767-610107 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 0

Conread position: 51-414
Cow position: chr23:5440956-5441324 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 40

Conread position: 51-441
Cow position: chr23:27402175-27402568 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 42

Conread position: 51-442
Cow position: chr23:2024046-2023649 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 42

Conread position: 51-442
Cow position: chr23:11343535-11343932 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 42

Conread position: 51-442
Cow position: chr23:11781822-11782221 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 46

Conread position: 51-442
Cow position: chr23:21772872-21772475 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 40

Conread position: 51-442
Cow position: chr23:26828291-26828684 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 42

Conread position: 51-442
Cow position: chr23:28915371-28915763 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 42

Conread position: 51-442
Cow position: chr23:29460213-29459818 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 42

Conread position: 51-442
Cow position: chr23:29625014-29625414 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 29

Conread position: 52-436
Cow position: chr23:16056751-16057126 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 249, 41

Conread position: 52-442
Cow position: chr23:5624533-5624144 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 41

Conread position: 55-442
Cow position: chr23:30623455-30623066 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 34

Conread position: 59-442
Cow position: chr23:11070122-11070514 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 32

Conread position: 83-442
Cow position: chr23:36028182-36027817 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 10

Conread position: 124-442
Cow position: chr23:5871288-5870973 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 235
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 38, 22

Conread position: 132-442
Cow position: chr23:17403729-17404049 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 0

Conread position: 137-442
Cow position: chr23:27312966-27313279 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 309

Conread position: 149-267
Cow position: chr23:36331542-36331660 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 92
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 162-436
Cow position: chr23:3887088-3887360 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 185
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 169, 60

Conread position: 31-280
Cow position: chr24:7404954-7404705 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 191
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 21, 78

Conread position: 31-410
Cow position: chr24:17105769-17105384 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 54

Conread position: 32-442
Cow position: chr24:38002932-38002514 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 59

Conread position: 33-442
Cow position: chr24:6524103-6524524 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 63

Conread position: 50-429
Cow position: chr24:12090109-12090495 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 43

Conread position: 50-435
Cow position: chr24:20367497-20367884 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 41

Conread position: 50-441
Cow position: chr24:6052214-6052600 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 250, 43

Conread position: 51-267
Cow position: chr24:17545356-17545564 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 165
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 42, 0

Conread position: 51-335
Cow position: chr24:6146430-6146704 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 195
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 226, 19

Conread position: 51-359
Cow position: chr24:26388754-26388448 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 222
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 224, 35

Conread position: 51-381
Cow position: chr24:14865903-14865583 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 229
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 57, 26

Conread position: 51-414
Cow position: chr24:13191298-13191660 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 252
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 224, 40

Conread position: 51-424
Cow position: chr24:32361714-32361346 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 242, 42

Conread position: 51-432
Cow position: chr24:12240008-12240398 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 273
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 214, 42

Conread position: 51-436
Cow position: chr24:17764468-17764082 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 239, 42

Conread position: 51-440
Cow position: chr24:41062586-41062980 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 227, 43

Conread position: 51-442
Cow position: chr24:6036050-6035653 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 230, 42

Conread position: 51-442
Cow position: chr24:9549396-9549790 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 42

Conread position: 51-442
Cow position: chr24:12348263-12347866 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 44

Conread position: 51-442
Cow position: chr24:14194717-14194322 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 51-442
Cow position: chr24:14760024-14760421 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 42

Conread position: 51-442
Cow position: chr24:25698076-25698465 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 51-442
Cow position: chr24:31067914-31067518 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 230, 42

Conread position: 51-442
Cow position: chr24:33937060-33937456 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 42

Conread position: 52-314
Cow position: chr24:14173632-14173374 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 184
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 224, 41

Conread position: 52-442
Cow position: chr24:8607461-8607857 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 41

Conread position: 53-442
Cow position: chr24:22974940-22975335 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 48

Conread position: 54-442
Cow position: chr24:43634252-43634639 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 13

Conread position: 55-442
Cow position: chr24:32849275-32849666 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 251
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 231, 46

Conread position: 58-414
Cow position: chr24:13491634-13491990 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 242
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 217, 30

Conread position: 76-442
Cow position: chr24:38641531-38641898 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 258
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 210, 48

Conread position: 101-414
Cow position: chr24:20603927-20604249 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 0

Conread position: 101-442
Cow position: chr24:22047889-22047542 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 74

Conread position: 116-442
Cow position: chr24:26847410-26847078 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 228
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 183, 74

Conread position: 148-414
Cow position: chr24:5279437-5279712 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 201
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 127, 0

Conread position: 149-442
Cow position: chr24:14250357-14250057 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 296

Conread position: 153-435
Cow position: chr24:11462781-11462486 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 289

Conread position: 162-442
Cow position: chr24:32853451-32853740 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 203
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 113, 0

Conread position: 166-442
Cow position: chr24:16474549-16474831 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 114

Conread position: 186-443
Cow position: chr24:28336794-28336533 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 116

Conread position: 188-411
Cow position: chr24:36404587-36404815 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 169
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 97, 83

Conread position: 218-442
Cow position: chr24:30870674-30870441 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 162
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 57, 0

Conread position: 31-440
Cow position: chr25:393073-393484 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 67

Conread position: 50-442
Cow position: chr25:20495398-20495769 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 28

Conread position: 51-377
Cow position: chr25:35626404-35626075 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 43

Conread position: 51-442
Cow position: chr25:17657450-17657844 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 42

Conread position: 51-442
Cow position: chr25:18265024-18265412 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 40

Conread position: 51-442
Cow position: chr25:23326198-23325803 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 42

Conread position: 51-442
Cow position: chr25:24303437-24303042 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 248, 42

Conread position: 51-442
Cow position: chr25:26755113-26755513 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 29

Conread position: 51-442
Cow position: chr25:28862699-28863097 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 42

Conread position: 51-442
Cow position: chr25:34503394-34502997 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 42

Conread position: 51-442
Cow position: chr25:34509351-34508957 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 40

Conread position: 51-442
Cow position: chr25:35553498-35553892 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 45

Conread position: 101-442
Cow position: chr25:34164682-34164338 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 22

Conread position: 103-442
Cow position: chr25:12082468-12082126 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 45

Conread position: 118-442
Cow position: chr25:27231251-27231580 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 307

Conread position: 126-442
Cow position: chr25:19923427-19923746 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 165

Conread position: 128-350
Cow position: chr25:30340458-30340225 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 181
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 147, 74

Conread position: 130-442
Cow position: chr25:33838287-33838601 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 228
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 145, 246

Conread position: 188-440
Cow position: chr25:20075442-20075700 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 0

Conread position: 201-442
Cow position: chr25:35445926-35446170 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 178
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 74, 93

Conread position: 31-299
Cow position: chr26:1614184-1614454 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 44

Conread position: 32-442
Cow position: chr26:2604874-2604444 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 298
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 96, 27

Conread position: 49-443
Cow position: chr26:4324625-4324239 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 35

Conread position: 51-382
Cow position: chr26:10011209-10011542 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 238
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 231, 26

Conread position: 51-411
Cow position: chr26:2201614-2201978 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 51-414
Cow position: chr26:18857204-18857568 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 51-414
Cow position: chr26:23889494-23889863 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 41

Conread position: 51-414
Cow position: chr26:28706974-28706609 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 51-414
Cow position: chr26:35122157-35121789 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 19

Conread position: 51-434
Cow position: chr26:9115121-9115511 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 81

Conread position: 51-441
Cow position: chr26:35423583-35423977 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 242, 42

Conread position: 51-442
Cow position: chr26:1088268-1088657 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 40

Conread position: 51-442
Cow position: chr26:1620735-1621128 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 244

Conread position: 51-443
Cow position: chr26:21012213-21012599 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 29

Conread position: 53-442
Cow position: chr26:26285949-26286340 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 230, 38

Conread position: 55-442
Cow position: chr26:11269316-11269702 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 36

Conread position: 60-428
Cow position: chr26:4548703-4549077 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 33

Conread position: 63-442
Cow position: chr26:25392893-25393268 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 30

Conread position: 101-442
Cow position: chr26:386811-387160 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 345

Conread position: 125-414
Cow position: chr26:15199183-15199480 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 0

Conread position: 148-415
Cow position: chr26:13773231-13773505 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 203
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 127, 50

Conread position: 151-435
Cow position: chr26:24238889-24239173 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 207
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 127, 13

Conread position: 239-442
Cow position: chr26:23317791-23317994 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 141
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 34, 82

Conread position: 28-430
Cow position: chr27:8429013-8429435 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 70

Conread position: 31-442
Cow position: chr27:8592413-8592822 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 292
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 17, 65

Conread position: 51-414
Cow position: chr27:16031358-16030989 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 51-436
Cow position: chr27:4811277-4811651 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 256
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 166, 42

Conread position: 51-442
Cow position: chr27:2557952-2557557 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 45

Conread position: 51-442
Cow position: chr27:4982411-4982808 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 42

Conread position: 51-442
Cow position: chr27:14380360-14380739 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 42

Conread position: 51-442
Cow position: chr27:19424339-19423941 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 43

Conread position: 51-442
Cow position: chr27:21284192-21283814 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 281, 39

Conread position: 51-442
Cow position: chr27:24296230-24295824 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 42

Conread position: 51-442
Cow position: chr27:26329972-26330368 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 42

Conread position: 51-442
Cow position: chr27:27291428-27291829 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 42

Conread position: 51-443
Cow position: chr27:22329535-22329928 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 279
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 18, 43

Conread position: 52-414
Cow position: chr27:2000885-2001253 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 40

Conread position: 52-435
Cow position: chr27:8972484-8972873 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 41

Conread position: 56-305
Cow position: chr27:6017950-6018191 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 173
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 213, 21

Conread position: 60-305
Cow position: chr27:12750073-12750315 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 174
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 221, 33

Conread position: 84-442
Cow position: chr27:9332747-9333103 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 131

Conread position: 91-392
Cow position: chr27:25884906-25885208 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 217
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 17, 86

Conread position: 148-442
Cow position: chr27:13901257-13901560 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 0

Conread position: 202-421
Cow position: chr27:1588270-1588496 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 170
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 105, 189

Conread position: 31-442
Cow position: chr28:25069901-25070329 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 65

Conread position: 50-435
Cow position: chr28:6472353-6471965 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 38

Conread position: 51-264
Cow position: chr28:7829591-7829801 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 163
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 40, 0

Conread position: 51-267
Cow position: chr28:2088659-2088873 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 167
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 151, 42

Conread position: 51-300
Cow position: chr28:28184470-28184722 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 186
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 81, 19

Conread position: 51-324
Cow position: chr28:1197212-1197481 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 42

Conread position: 51-345
Cow position: chr28:15589155-15589459 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 215
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 19, 33

Conread position: 51-359
Cow position: chr28:16041569-16041264 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 227
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 116, 40

Conread position: 51-414
Cow position: chr28:5637136-5637504 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 51-435
Cow position: chr28:785752-786136 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 42

Conread position: 51-442
Cow position: chr28:5211207-5211603 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 42

Conread position: 51-442
Cow position: chr28:9181954-9182350 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 40

Conread position: 51-442
Cow position: chr28:17031007-17030616 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 227, 42

Conread position: 51-442
Cow position: chr28:17371528-17371163 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 272
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 248, 26

Conread position: 51-442
Cow position: chr28:21568988-21569380 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 227, 40

Conread position: 51-442
Cow position: chr28:23674902-23675295 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 40

Conread position: 51-443
Cow position: chr28:13463048-13463447 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 42

Conread position: 52-442
Cow position: chr28:10302924-10303318 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 39

Conread position: 52-442
Cow position: chr28:23620051-23620424 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 52-443
Cow position: chr28:21896368-21896765 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 39

Conread position: 60-442
Cow position: chr28:12997779-12998159 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 20

Conread position: 69-267
Cow position: chr28:33688698-33688892 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 150
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 91, 0

Conread position: 101-370
Cow position: chr28:8971209-8971484 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 193
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 177, 240

Conread position: 101-414
Cow position: chr28:1198327-1198649 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 0

Conread position: 101-442
Cow position: chr28:23615275-23615626 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 0

Conread position: 125-382
Cow position: chr28:34200878-34200622 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 199
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 131, 59

Conread position: 133-442
Cow position: chr28:14233929-14234229 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 226
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 145, 66

Conread position: 157-442
Cow position: chr28:25828583-25828876 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 289

Conread position: 176-442
Cow position: chr28:17209759-17209498 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 48

Conread position: 188-439
Cow position: chr28:2417014-2417262 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 30

Conread position: 25-311
Cow position: chr29:14839046-14839332 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 206
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 8, 70

Conread position: 25-442
Cow position: chr29:11786028-11786456 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 76

Conread position: 31-442
Cow position: chr29:4864361-4864773 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 32

Conread position: 31-442
Cow position: chr29:6218775-6218358 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 67

Conread position: 49-441
Cow position: chr29:14373467-14373072 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 266
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 157, 44

Conread position: 51-412
Cow position: chr29:3329648-3330015 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 51-414
Cow position: chr29:31184432-31184801 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 42

Conread position: 51-414
Cow position: chr29:31765096-31765465 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 40

Conread position: 51-414
Cow position: chr29:35956246-35955881 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 239, 40

Conread position: 51-432
Cow position: chr29:27857628-27858000 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 51

Conread position: 51-441
Cow position: chr29:34737637-34737250 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 42

Conread position: 51-442
Cow position: chr29:2102903-2103295 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 42

Conread position: 51-442
Cow position: chr29:4163744-4164140 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 40

Conread position: 51-442
Cow position: chr29:7428086-7427689 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 230, 42

Conread position: 51-442
Cow position: chr29:36208753-36209147 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 227, 42

Conread position: 52-432
Cow position: chr29:16102060-16101675 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 41

Conread position: 53-305
Cow position: chr29:19397549-19397795 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 181
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 174, 17

Conread position: 53-442
Cow position: chr29:7847447-7847844 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 15

Conread position: 56-442
Cow position: chr29:21535852-21535470 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 250, 30

Conread position: 57-441
Cow position: chr29:12797648-12798035 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 13

Conread position: 64-267
Cow position: chr29:17138177-17138377 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 153
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 29, 0

Conread position: 75-441
Cow position: chr29:38229087-38229459 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 18

Conread position: 84-442
Cow position: chr29:13129536-13129190 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 0

Conread position: 95-442
Cow position: chr29:14454328-14454667 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 27

Conread position: 102-442
Cow position: chr29:34780882-34780532 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 0

Conread position: 116-427
Cow position: chr29:4366284-4366596 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 91

Conread position: 128-443
Cow position: chr29:2401818-2402139 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 223

Conread position: 149-442
Cow position: chr29:35002523-35002221 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 216
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 126, 0

Conread position: 151-417
Cow position: chr29:24511393-24511129 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 189
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 135, 20

Conread position: 166-442
Cow position: chr29:32643735-32644005 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 141

Conread position: 189-442
Cow position: chr29:43729032-43729292 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 180
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 13, 30

Conread position: 194-363
Cow position: chr29:5787296-5787118 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 133
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 81, 98

Conread position: 194-442
Cow position: chr29:5785690-5785946 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 185
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 81, 98

Conread position: 201-442
Cow position: chr29:34806619-34806389 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 165
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 74, 93

Conread position: 218-443
Cow position: chr29:35076344-35076578 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 170
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 57, 0

Conread position: 31-420
Cow position: chr3:34116419-34116019 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 274
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 244, 32

Conread position: 31-442
Cow position: chr3:46224840-46225245 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 78

Conread position: 31-442
Cow position: chr3:74848220-74847814 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 66

Conread position: 32-442
Cow position: chr3:34087249-34086836 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 63

Conread position: 35-442
Cow position: chr3:56102697-56103106 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 20

Conread position: 43-442
Cow position: chr3:64875734-64876139 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 49

Conread position: 49-441
Cow position: chr3:55374052-55374441 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 45

Conread position: 50-267
Cow position: chr3:63276890-63276681 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 164
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 43, 0

Conread position: 50-442
Cow position: chr3:15663469-15663082 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 230, 43

Conread position: 50-442
Cow position: chr3:65084903-65085300 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 41

Conread position: 51-267
Cow position: chr3:2921228-2921440 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 169
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 26, 0

Conread position: 51-267
Cow position: chr3:48845976-48846188 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 164
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 40, 0

Conread position: 51-269
Cow position: chr3:65177980-65178194 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 164
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 40, 0

Conread position: 51-414
Cow position: chr3:13723743-13723373 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 39

Conread position: 51-414
Cow position: chr3:15416436-15416805 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 51-414
Cow position: chr3:20379747-20379380 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 51-414
Cow position: chr3:20795263-20795632 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 51-414
Cow position: chr3:24265172-24265537 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 51-414
Cow position: chr3:31021652-31022018 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 51-414
Cow position: chr3:44926784-44927156 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 42

Conread position: 51-414
Cow position: chr3:46858313-46857945 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 51-414
Cow position: chr3:47986411-47986778 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 37

Conread position: 51-414
Cow position: chr3:50204535-50204903 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 51-414
Cow position: chr3:66968909-66968541 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 40

Conread position: 51-426
Cow position: chr3:49611238-49610856 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 51-434
Cow position: chr3:31224249-31224634 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 42

Conread position: 51-435
Cow position: chr3:72633043-72633432 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 51-440
Cow position: chr3:36671651-36671253 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 42

Conread position: 51-442
Cow position: chr3:2074753-2075146 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 230, 40

Conread position: 51-442
Cow position: chr3:2866685-2866289 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 51-442
Cow position: chr3:4030725-4031109 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 272
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 242, 29

Conread position: 51-442
Cow position: chr3:6837999-6838395 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 51-442
Cow position: chr3:7476950-7476553 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 42

Conread position: 51-442
Cow position: chr3:21000119-20999705 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 42

Conread position: 51-442
Cow position: chr3:27866626-27867028 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 53

Conread position: 51-442
Cow position: chr3:29574156-29573762 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 38

Conread position: 51-442
Cow position: chr3:38862705-38863086 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 280
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 132, 42

Conread position: 51-442
Cow position: chr3:64376739-64376349 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 230, 30

Conread position: 51-442
Cow position: chr3:64684038-64683630 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 279
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 81, 46

Conread position: 51-442
Cow position: chr3:68510366-68509973 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 51-442
Cow position: chr3:78024460-78024073 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 42

Conread position: 51-443
Cow position: chr3:64317710-64318106 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 19

Conread position: 51-443
Cow position: chr3:74060442-74060837 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 19

Conread position: 52-435
Cow position: chr3:20475484-20475867 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 39

Conread position: 53-343
Cow position: chr3:19798180-19797884 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 214
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 222, 38

Conread position: 54-278
Cow position: chr3:14054246-14054467 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 172
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 39, 0

Conread position: 54-442
Cow position: chr3:64171201-64171606 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 297

Conread position: 62-267
Cow position: chr3:51255880-51256073 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 144
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 29, 0

Conread position: 72-431
Cow position: chr3:54291254-54291609 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 227, 28

Conread position: 73-442
Cow position: chr3:79668099-79668476 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 18

Conread position: 101-442
Cow position: chr3:24351711-24352053 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 77

Conread position: 103-442
Cow position: chr3:37972053-37972394 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 189

Conread position: 106-441
Cow position: chr3:22352639-22352979 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 0

Conread position: 116-443
Cow position: chr3:62794044-62793714 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 161

Conread position: 121-442
Cow position: chr3:5886923-5887250 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 274

Conread position: 123-442
Cow position: chr3:16657828-16657508 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 223
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 155, 77

Conread position: 123-442
Cow position: chr3:26722774-26722445 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 0

Conread position: 124-442
Cow position: chr3:42500107-42500429 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 234
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 15, 43

Conread position: 128-442
Cow position: chr3:3300686-3301008 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 200

Conread position: 151-442
Cow position: chr3:19795025-19794725 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 0

Conread position: 151-442
Cow position: chr3:64024965-64024665 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 296

Conread position: 157-435
Cow position: chr3:579247-579532 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 135

Conread position: 165-432
Cow position: chr3:42602737-42603026 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 211
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 126, 0

Conread position: 166-442
Cow position: chr3:13248938-13248657 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 202
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 109, 149

Conread position: 166-442
Cow position: chr3:79595717-79595999 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 204
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 109, 29

Conread position: 167-443
Cow position: chr3:59332664-59332951 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 210
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 81, 145

Conread position: 176-441
Cow position: chr3:2117537-2117811 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 200
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 6, 217

Conread position: 186-411
Cow position: chr3:46682935-46683169 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 171
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 89, 0

Conread position: 193-442
Cow position: chr3:70322564-70322308 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 184
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 92, 202

Conread position: 201-442
Cow position: chr3:14279803-14280046 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 182
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 134, 92

Conread position: 203-414
Cow position: chr3:64655329-64655547 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 159
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 72, 0

Conread position: 209-384
Cow position: chr3:44536863-44536679 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 136
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 66, 0

Conread position: 210-442
Cow position: chr3:41057089-41057326 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 165
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 65, 8

Conread position: 233-415
Cow position: chr3:46006252-46006431 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 140
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 104, 58

Conread position: 25-442
Cow position: chr4:39645493-39645927 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 6

Conread position: 31-436
Cow position: chr4:22316479-22316890 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 53

Conread position: 31-442
Cow position: chr4:14918807-14919208 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 67

Conread position: 50-411
Cow position: chr4:59783449-59783817 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 46

Conread position: 51-267
Cow position: chr4:51761218-51761005 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 162
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 40, 0

Conread position: 51-267
Cow position: chr4:67681202-67680989 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 166
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 42, 0

Conread position: 51-410
Cow position: chr4:12454750-12455103 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 251
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 227, 19

Conread position: 51-411
Cow position: chr4:17234796-17235162 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 51-414
Cow position: chr4:606386-606749 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 51-414
Cow position: chr4:3170056-3170424 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 40

Conread position: 51-414
Cow position: chr4:24139647-24140017 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 40

Conread position: 51-414
Cow position: chr4:27336988-27337359 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 40

Conread position: 51-426
Cow position: chr4:38583656-38584037 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 51-428
Cow position: chr4:23525362-23525737 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 19

Conread position: 51-432
Cow position: chr4:4673804-4673417 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 41

Conread position: 51-442
Cow position: chr4:20242931-20243328 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 51-442
Cow position: chr4:20657285-20656893 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 51-442
Cow position: chr4:23150882-23150487 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 42

Conread position: 51-442
Cow position: chr4:27288326-27287935 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 19

Conread position: 51-442
Cow position: chr4:34712592-34712988 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 42

Conread position: 51-442
Cow position: chr4:36899152-36899549 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 42

Conread position: 51-442
Cow position: chr4:41961672-41962067 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 51-442
Cow position: chr4:42330946-42330560 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 271
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 242, 42

Conread position: 51-442
Cow position: chr4:43316874-43316477 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 39

Conread position: 51-442
Cow position: chr4:43883869-43884265 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 7

Conread position: 51-442
Cow position: chr4:57987519-57987915 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 42

Conread position: 51-442
Cow position: chr4:60625752-60625366 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 270
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 249, 28

Conread position: 51-442
Cow position: chr4:65918465-65918851 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 256, 7

Conread position: 51-443
Cow position: chr4:1239643-1239258 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 227, 42

Conread position: 51-443
Cow position: chr4:29530682-29530284 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 42

Conread position: 51-443
Cow position: chr4:67394002-67394400 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 52-426
Cow position: chr4:30507980-30508354 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 232, 41

Conread position: 52-442
Cow position: chr4:58882608-58882209 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 271
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 222, 41

Conread position: 60-442
Cow position: chr4:10823084-10822701 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 269
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 144, 31

Conread position: 63-337
Cow position: chr4:63639334-63639059 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 203
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 208, 30

Conread position: 101-442
Cow position: chr4:47115657-47116007 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 346

Conread position: 105-442
Cow position: chr4:38180586-38180926 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 99

Conread position: 109-436
Cow position: chr4:33262-32934 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 126

Conread position: 116-441
Cow position: chr4:20090948-20091271 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 103

Conread position: 116-442
Cow position: chr4:58859765-58859433 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 229
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 77, 65

Conread position: 142-442
Cow position: chr4:19140866-19141174 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 216
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 136, 64

Conread position: 151-442
Cow position: chr4:61449385-61449685 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 0

Conread position: 161-414
Cow position: chr4:10553130-10553386 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 197
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 114, 39

Conread position: 168-420
Cow position: chr4:25578491-25578751 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 197
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 132, 31

Conread position: 186-442
Cow position: chr4:61724147-61724410 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 190
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 5, 89

Conread position: 189-442
Cow position: chr4:62569607-62569856 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 174
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 86, 177

Conread position: 194-442
Cow position: chr4:46667577-46667830 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 179
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 89, 44

Conread position: 203-426
Cow position: chr4:61191912-61192137 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 164
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 72, 89

Conread position: 206-414
Cow position: chr4:5441734-5441517 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 155
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 69, 0

Conread position: 224-435
Cow position: chr4:1006838-1007057 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 161
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 57, 113

Conread position: 224-442
Cow position: chr4:32249437-32249666 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 163
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 51, 42

Conread position: 238-442
Cow position: chr4:68108153-68107949 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 141
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 62, 137

Conread position: 30-376
Cow position: chr5:3252294-3251953 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 240
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 279, 24

Conread position: 30-442
Cow position: chr5:27690843-27691252 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 66

Conread position: 31-314
Cow position: chr5:6986635-6986352 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 67

Conread position: 31-376
Cow position: chr5:57983993-57983648 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 246
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 17, 67

Conread position: 31-442
Cow position: chr5:51501739-51502156 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 62

Conread position: 36-434
Cow position: chr5:40791696-40792096 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 61

Conread position: 46-354
Cow position: chr5:72346241-72345914 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 231
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 144, 47

Conread position: 50-432
Cow position: chr5:46649982-46650359 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 277
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 169, 9

Conread position: 50-442
Cow position: chr5:1339048-1338649 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 43

Conread position: 50-442
Cow position: chr5:7396123-7396515 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 43

Conread position: 51-267
Cow position: chr5:6615418-6615205 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 162
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 40, 0

Conread position: 51-359
Cow position: chr5:69770956-69771252 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 218
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 227, 7

Conread position: 51-414
Cow position: chr5:24577311-24577680 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 51-414
Cow position: chr5:59064319-59064687 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 51-426
Cow position: chr5:3970400-3970782 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 51-440
Cow position: chr5:18249934-18250317 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 42

Conread position: 51-442
Cow position: chr5:2976661-2977056 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 40

Conread position: 51-442
Cow position: chr5:3789103-3789495 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 42

Conread position: 51-442
Cow position: chr5:5106100-5106494 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 40

Conread position: 51-442
Cow position: chr5:10921720-10922117 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 42

Conread position: 51-442
Cow position: chr5:14543425-14543029 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 38

Conread position: 51-442
Cow position: chr5:15454652-15455036 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 249, 45

Conread position: 51-442
Cow position: chr5:17026953-17027337 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 51-442
Cow position: chr5:18491281-18491680 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 229, 42

Conread position: 51-442
Cow position: chr5:21189096-21189490 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 230, 42

Conread position: 51-442
Cow position: chr5:24298888-24299285 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 42

Conread position: 51-442
Cow position: chr5:37735251-37735647 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 42

Conread position: 51-442
Cow position: chr5:47560686-47560288 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 42

Conread position: 51-442
Cow position: chr5:49221617-49221227 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 51-442
Cow position: chr5:51166433-51166039 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 26

Conread position: 51-442
Cow position: chr5:52823331-52822937 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 42

Conread position: 51-442
Cow position: chr5:55630939-55631336 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 42

Conread position: 51-442
Cow position: chr5:58198885-58199280 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 40

Conread position: 51-443
Cow position: chr5:46779391-46779788 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 40

Conread position: 52-414
Cow position: chr5:59146253-59146621 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 41

Conread position: 52-442
Cow position: chr5:3544184-3544568 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 41

Conread position: 52-442
Cow position: chr5:58191793-58192186 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 39

Conread position: 52-442
Cow position: chr5:63312641-63312252 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 247, 36

Conread position: 53-267
Cow position: chr5:7276710-7276920 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 164
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 37, 0

Conread position: 53-414
Cow position: chr5:51746100-51746462 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 35

Conread position: 53-442
Cow position: chr5:443432-443038 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 38

Conread position: 55-414
Cow position: chr5:6585574-6585210 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 36

Conread position: 55-442
Cow position: chr5:31634306-31634708 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 38

Conread position: 93-442
Cow position: chr5:64061242-64061598 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 352

Conread position: 101-379
Cow position: chr5:70531540-70531259 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 80

Conread position: 118-442
Cow position: chr5:6576653-6576320 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 235
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 157, 53

Conread position: 123-435
Cow position: chr5:31916569-31916876 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 214
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 166, 58

Conread position: 128-442
Cow position: chr5:45704968-45705283 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 230
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 10, 69

Conread position: 129-422
Cow position: chr5:27613192-27613476 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 251, 33

Conread position: 132-442
Cow position: chr5:34708722-34709041 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 0

Conread position: 137-442
Cow position: chr5:17387459-17387145 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 219
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 138, 0

Conread position: 149-443
Cow position: chr5:15677031-15677333 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 214
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 126, 0

Conread position: 151-442
Cow position: chr5:50899606-50899905 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 0

Conread position: 151-442
Cow position: chr5:75755557-75755844 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 143

Conread position: 152-442
Cow position: chr5:43991256-43991554 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 214
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 126, 6

Conread position: 161-414
Cow position: chr5:26073804-26073544 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 189
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 114, 176

Conread position: 164-414
Cow position: chr5:55722514-55722773 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 194
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 111, 0

Conread position: 164-442
Cow position: chr5:57936137-57935837 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 210
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 114, 0

Conread position: 178-442
Cow position: chr5:35207241-35207514 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 197
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 97, 0

Conread position: 178-442
Cow position: chr5:58245331-58245604 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 185
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 97, 172

Conread position: 192-441
Cow position: chr5:29558610-29558866 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 0

Conread position: 194-411
Cow position: chr5:39362887-39363113 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 168
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 81, 0

Conread position: 201-442
Cow position: chr5:16895126-16894879 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 179
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 14, 116

Conread position: 220-442
Cow position: chr5:8529692-8529917 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 82

Conread position: 225-435
Cow position: chr5:60446479-60446697 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 165
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 68, 0

Conread position: 226-436
Cow position: chr5:46796955-46797166 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 162
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 72, 89

Conread position: 31-442
Cow position: chr6:33983813-33984216 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 259, 25

Conread position: 31-442
Cow position: chr6:38438595-38439021 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 67

Conread position: 31-443
Cow position: chr6:14950663-14950243 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 67

Conread position: 33-411
Cow position: chr6:34237096-34236715 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 39

Conread position: 33-442
Cow position: chr6:35600670-35601089 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 65

Conread position: 50-264
Cow position: chr6:48875319-48875116 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 159
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 43, 0

Conread position: 50-442
Cow position: chr6:17121399-17121800 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 42

Conread position: 50-442
Cow position: chr6:67553245-67553642 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 41

Conread position: 51-267
Cow position: chr6:27172844-27173056 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 160
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 41, 0

Conread position: 51-269
Cow position: chr6:48558-48343 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 51-276
Cow position: chr6:43790564-43790340 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 170
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 90, 42

Conread position: 51-282
Cow position: chr6:2581412-2581643 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 179
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 116, 42

Conread position: 51-290
Cow position: chr6:42616112-42616347 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 51-385
Cow position: chr6:66188786-66188446 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 51-402
Cow position: chr6:42266753-42267099 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 42

Conread position: 51-412
Cow position: chr6:46947833-46948197 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 51-414
Cow position: chr6:843814-843444 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 51-414
Cow position: chr6:7467636-7467268 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 51-414
Cow position: chr6:11453854-11453484 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 51-414
Cow position: chr6:12663301-12662932 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 51-414
Cow position: chr6:28160423-28160792 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 51-414
Cow position: chr6:50485759-50485401 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 42

Conread position: 51-435
Cow position: chr6:19103894-19103504 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 51-435
Cow position: chr6:32419963-32420351 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 42

Conread position: 51-436
Cow position: chr6:28481351-28481731 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 242, 27

Conread position: 51-440
Cow position: chr6:40813379-40813770 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 42

Conread position: 51-442
Cow position: chr6:478564-478961 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 42

Conread position: 51-442
Cow position: chr6:3152232-3152625 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 38

Conread position: 51-442
Cow position: chr6:8634290-8633913 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 227, 42

Conread position: 51-442
Cow position: chr6:15276226-15275829 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 227, 42

Conread position: 51-442
Cow position: chr6:22043994-22043599 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 42

Conread position: 51-442
Cow position: chr6:26668010-26667615 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 40

Conread position: 51-442
Cow position: chr6:43187119-43187520 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 272
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 93, 42

Conread position: 51-442
Cow position: chr6:55238710-55239100 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 232, 40

Conread position: 51-442
Cow position: chr6:57856783-57857181 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 42

Conread position: 51-442
Cow position: chr6:58030793-58031188 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 230, 42

Conread position: 51-442
Cow position: chr6:64719332-64719727 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 42

Conread position: 51-442
Cow position: chr6:65875266-65874873 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 42

Conread position: 51-443
Cow position: chr6:1498213-1498614 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 227, 49

Conread position: 56-442
Cow position: chr6:32286572-32286962 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 35

Conread position: 56-442
Cow position: chr6:53672357-53672744 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 40

Conread position: 78-417
Cow position: chr6:34405342-34405688 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 15

Conread position: 100-436
Cow position: chr6:24624078-24623737 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 108

Conread position: 116-432
Cow position: chr6:25180106-25179784 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 164

Conread position: 116-436
Cow position: chr6:52557555-52557246 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 44

Conread position: 117-385
Cow position: chr6:49963876-49963598 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 201
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 55, 0

Conread position: 124-378
Cow position: chr6:66549714-66549968 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 177
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 156, 57

Conread position: 125-360
Cow position: chr6:19718670-19718914 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 181
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 150, 0

Conread position: 128-279
Cow position: chr6:52000828-52000976 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 20, 0

Conread position: 133-267
Cow position: chr6:57228686-57228819 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 104
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 48, 0

Conread position: 137-442
Cow position: chr6:56925829-56926144 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 221
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 39, 0

Conread position: 157-441
Cow position: chr6:16221011-16220745 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 200
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 181, 61

Conread position: 165-442
Cow position: chr6:1263287-1263567 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 192
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 110, 150

Conread position: 171-441
Cow position: chr6:44510221-44510496 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 83

Conread position: 172-377
Cow position: chr6:66839520-66839730 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 151
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 114, 177

Conread position: 194-442
Cow position: chr6:17344354-17344610 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 195
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 81, 45

Conread position: 202-423
Cow position: chr6:64315388-64315178 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 177
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 37, 0

Conread position: 209-442
Cow position: chr6:9322172-9322412 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 172
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 69, 133

Conread position: 209-442
Cow position: chr6:51673941-51674177 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 174
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 69, 0

Conread position: 22-398
Cow position: chr7:2577778-2578160 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 50

Conread position: 31-441
Cow position: chr7:58718208-58718617 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 60

Conread position: 31-442
Cow position: chr7:25082336-25082739 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 51

Conread position: 31-442
Cow position: chr7:44455982-44455563 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 67

Conread position: 31-442
Cow position: chr7:57910451-57910868 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 63

Conread position: 31-442
Cow position: chr7:59712333-59712747 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 44

Conread position: 31-443
Cow position: chr7:67871845-67872263 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 53

Conread position: 32-334
Cow position: chr7:57578412-57578106 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 64

Conread position: 32-442
Cow position: chr7:51193790-51194197 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 45

Conread position: 33-441
Cow position: chr7:24852183-24851757 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 72

Conread position: 40-442
Cow position: chr7:35742658-35743059 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 11

Conread position: 47-442
Cow position: chr7:65431811-65431408 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 46

Conread position: 50-391
Cow position: chr7:66571920-66571589 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 223
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 129, 43

Conread position: 50-399
Cow position: chr7:61424425-61424070 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 239, 51

Conread position: 50-441
Cow position: chr7:10451152-10450763 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 251, 41

Conread position: 50-442
Cow position: chr7:34819163-34819559 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 41

Conread position: 51-276
Cow position: chr7:6723140-6723361 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 167
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 40, 0

Conread position: 51-345
Cow position: chr7:35920206-35919906 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 51-400
Cow position: chr7:11420475-11420119 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 42

Conread position: 51-410
Cow position: chr7:113722-114072 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 0

Conread position: 51-411
Cow position: chr7:33309144-33308772 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 51-411
Cow position: chr7:64012531-64012897 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 51-414
Cow position: chr7:845027-845396 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 51-414
Cow position: chr7:982489-982121 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 42

Conread position: 51-414
Cow position: chr7:38188715-38189080 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 51-414
Cow position: chr7:45100103-45100476 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 40

Conread position: 51-414
Cow position: chr7:50961183-50961552 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 40

Conread position: 51-442
Cow position: chr7:12806-12410 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 51-442
Cow position: chr7:1331308-1330916 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 51-442
Cow position: chr7:1441730-1441333 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 51-442
Cow position: chr7:3297572-3297178 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 51-442
Cow position: chr7:19463742-19463345 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 42

Conread position: 51-442
Cow position: chr7:21989740-21990145 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 42

Conread position: 51-442
Cow position: chr7:33069398-33069013 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 53

Conread position: 51-442
Cow position: chr7:33334556-33334950 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 19

Conread position: 51-442
Cow position: chr7:34489012-34489409 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 42

Conread position: 51-442
Cow position: chr7:37165968-37166345 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 42

Conread position: 51-442
Cow position: chr7:39794971-39795369 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 53

Conread position: 51-442
Cow position: chr7:46187129-46187522 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 51-442
Cow position: chr7:46749093-46749484 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 30

Conread position: 51-442
Cow position: chr7:52384105-52383713 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 8

Conread position: 51-442
Cow position: chr7:58921261-58921641 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 240, 15

Conread position: 51-442
Cow position: chr7:63134952-63135332 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 40

Conread position: 51-442
Cow position: chr7:64329783-64330165 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 266
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 225, 42

Conread position: 51-442
Cow position: chr7:64355121-64355520 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 271
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 224, 40

Conread position: 52-414
Cow position: chr7:25442879-25443241 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 41

Conread position: 52-442
Cow position: chr7:6628661-6628270 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 39

Conread position: 55-442
Cow position: chr7:26196921-26196524 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 44

Conread position: 60-441
Cow position: chr7:39499171-39498780 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 33

Conread position: 101-442
Cow position: chr7:19399038-19398696 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 48

Conread position: 101-442
Cow position: chr7:39513989-39513660 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 238
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 199, 94

Conread position: 103-443
Cow position: chr7:51018744-51019086 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 24

Conread position: 106-442
Cow position: chr7:26884618-26884952 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 132

Conread position: 116-442
Cow position: chr7:62732146-62732479 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 56

Conread position: 118-428
Cow position: chr7:41444199-41444504 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 220
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 160, 87

Conread position: 125-435
Cow position: chr7:64104451-64104135 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 213
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 153, 217

Conread position: 133-442
Cow position: chr7:26837604-26837919 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 226
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 37, 50

Conread position: 148-442
Cow position: chr7:41474552-41474860 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 222
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 128, 0

Conread position: 148-442
Cow position: chr7:52762332-52762029 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 299

Conread position: 158-442
Cow position: chr7:40203204-40203496 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 288

Conread position: 167-442
Cow position: chr7:19799245-19798960 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 0

Conread position: 170-411
Cow position: chr7:13806426-13806176 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 182
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 105, 0

Conread position: 183-442
Cow position: chr7:37520078-37519811 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 182
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 92, 19

Conread position: 13-442
Cow position: chr8:53428648-53429077 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 8

Conread position: 27-442
Cow position: chr8:12661913-12661493 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 57

Conread position: 31-299
Cow position: chr8:59657799-59658064 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 192
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 21, 67

Conread position: 47-443
Cow position: chr8:47676113-47676518 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 45

Conread position: 50-442
Cow position: chr8:5020295-5020693 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 43

Conread position: 51-267
Cow position: chr8:6852455-6852668 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 163
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 40, 0

Conread position: 51-267
Cow position: chr8:45337874-45337661 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 165
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 40, 0

Conread position: 51-411
Cow position: chr8:32628721-32628360 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 51-414
Cow position: chr8:15224094-15224457 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 37

Conread position: 51-414
Cow position: chr8:16194409-16194777 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 51-414
Cow position: chr8:25342487-25342850 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 257, 42

Conread position: 51-432
Cow position: chr8:8468568-8468951 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 19

Conread position: 51-435
Cow position: chr8:31977117-31976727 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 230, 40

Conread position: 51-440
Cow position: chr8:1998473-1998862 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 42

Conread position: 51-442
Cow position: chr8:7167247-7167644 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 42

Conread position: 51-442
Cow position: chr8:8914015-8914412 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 38

Conread position: 51-442
Cow position: chr8:12446106-12445713 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 40

Conread position: 51-442
Cow position: chr8:14588582-14588186 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 42

Conread position: 51-442
Cow position: chr8:16940680-16940290 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 41

Conread position: 51-442
Cow position: chr8:22030404-22030801 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 42

Conread position: 51-442
Cow position: chr8:22376899-22376502 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 40

Conread position: 51-442
Cow position: chr8:30157972-30158370 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 40

Conread position: 51-442
Cow position: chr8:32042079-32042475 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 51-442
Cow position: chr8:37534299-37534705 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 0

Conread position: 51-442
Cow position: chr8:38562155-38561758 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 49

Conread position: 51-442
Cow position: chr8:39740400-39740003 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 51-442
Cow position: chr8:41950472-41950857 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 248, 27

Conread position: 51-442
Cow position: chr8:49220476-49220867 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 42

Conread position: 51-442
Cow position: chr8:50927814-50927418 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 42

Conread position: 51-442
Cow position: chr8:60067169-60067564 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 45

Conread position: 52-442
Cow position: chr8:8009676-8010079 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 37

Conread position: 52-442
Cow position: chr8:29918679-29918316 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 273
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 226, 39

Conread position: 54-442
Cow position: chr8:5244144-5243757 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 35

Conread position: 56-311
Cow position: chr8:39968982-39968731 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 192
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 90, 44

Conread position: 61-440
Cow position: chr8:51061843-51061457 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 32

Conread position: 102-267
Cow position: chr8:7052216-7052381 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 128
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 116-420
Cow position: chr8:19194033-19194333 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 75

Conread position: 127-344
Cow position: chr8:55089428-55089634 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 163
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 211, 73

Conread position: 135-410
Cow position: chr8:16384597-16384322 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 200
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 136, 199

Conread position: 148-300
Cow position: chr8:7682870-7682719 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 115
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 119, 103

Conread position: 153-344
Cow position: chr8:32989040-32988849 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 146
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 138, 70

Conread position: 155-411
Cow position: chr8:11300815-11301073 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 168
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 42, 56

Conread position: 157-411
Cow position: chr8:53821466-53821729 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 193
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 118, 0

Conread position: 161-442
Cow position: chr8:42116759-42117037 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 134

Conread position: 223-442
Cow position: chr8:9963596-9963372 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 174
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 73, 31

Conread position: 243-440
Cow position: chr8:59507422-59507610 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 150
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 58, 0

Conread position: 255-442
Cow position: chr8:39987417-39987224 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 157
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 40, 0

Conread position: 25-424
Cow position: chr9:3222389-3222790 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 77

Conread position: 30-442
Cow position: chr9:5517105-5517518 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 65

Conread position: 31-442
Cow position: chr9:30401203-30401622 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 65

Conread position: 31-442
Cow position: chr9:59196775-59197190 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 67

Conread position: 33-311
Cow position: chr9:17008042-17007756 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 202
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 19, 66

Conread position: 42-442
Cow position: chr9:19078802-19079204 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 53

Conread position: 50-276
Cow position: chr9:31077902-31078121 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 161
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 30, 0

Conread position: 51-267
Cow position: chr9:1249054-1248841 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 162
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 40, 0

Conread position: 51-345
Cow position: chr9:43225758-43225462 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 51-384
Cow position: chr9:10939667-10939996 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 42

Conread position: 51-414
Cow position: chr9:777871-777499 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 40

Conread position: 51-414
Cow position: chr9:28681143-28681512 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 51-414
Cow position: chr9:39303610-39303241 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 51-414
Cow position: chr9:47044890-47045259 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 51-416
Cow position: chr9:62444032-62443669 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 242, 42

Conread position: 51-435
Cow position: chr9:44203137-44202747 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 51-435
Cow position: chr9:47170995-47171386 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 40

Conread position: 51-442
Cow position: chr9:2495798-2495401 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 227, 45

Conread position: 51-442
Cow position: chr9:7005684-7006080 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 42

Conread position: 51-442
Cow position: chr9:28785285-28785681 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 42

Conread position: 51-442
Cow position: chr9:31810520-31810917 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 42

Conread position: 51-442
Cow position: chr9:44168532-44168930 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 40

Conread position: 51-442
Cow position: chr9:53776644-53777032 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 29

Conread position: 51-442
Cow position: chr9:54413664-54413270 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 227, 8

Conread position: 52-289
Cow position: chr9:7844841-7844619 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 168
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 16, 0

Conread position: 52-379
Cow position: chr9:14002981-14003306 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 39

Conread position: 52-442
Cow position: chr9:10856964-10857372 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 41

Conread position: 52-442
Cow position: chr9:42868925-42868532 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 41

Conread position: 53-442
Cow position: chr9:6365322-6365716 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 40

Conread position: 55-440
Cow position: chr9:10678978-10678592 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 236, 37

Conread position: 55-442
Cow position: chr9:2856791-2857183 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 228, 38

Conread position: 56-442
Cow position: chr9:5006921-5007305 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 46

Conread position: 58-407
Cow position: chr9:56862207-56861865 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 35

Conread position: 72-442
Cow position: chr9:34946050-34945674 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 236, 21

Conread position: 95-442
Cow position: chr9:23421570-23421923 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 243
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 183, 293

Conread position: 101-442
Cow position: chr9:50326687-50327035 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 112

Conread position: 117-442
Cow position: chr9:30439404-30439734 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 79

Conread position: 118-440
Cow position: chr9:3411886-3411557 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 34

Conread position: 125-442
Cow position: chr9:18710507-18710831 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 203

Conread position: 135-441
Cow position: chr9:3933088-3932775 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 60

Conread position: 148-311
Cow position: chr9:30020473-30020636 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 122
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 127, 91

Conread position: 158-364
Cow position: chr9:25596699-25596913 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 155
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 117, 184

Conread position: 161-442
Cow position: chr9:2618747-2618445 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 205
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 120, 0

Conread position: 165-442
Cow position: chr9:1259486-1259776 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 195
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 54, 0

Conread position: 187-360
Cow position: chr9:24725676-24725852 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 130
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 132, 104

Conread position: 205-442
Cow position: chr9:26576795-26577033 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 167
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 109, 88

Conread position: 209-442
Cow position: chr9:46670029-46670267 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 174
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 68, 147

Conread position: 31-402
Cow position: chrX:21818623-21818262 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 40

Conread position: 31-442
Cow position: chrX:2008870-2008455 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 67

Conread position: 31-442
Cow position: chrX:6656191-6655788 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 67

Conread position: 31-442
Cow position: chrX:29765826-29766248 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 65

Conread position: 33-436
Cow position: chrX:38228482-38228074 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 61

Conread position: 50-440
Cow position: chrX:16782136-16782526 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 231, 43

Conread position: 50-442
Cow position: chrX:24175098-24174705 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 38

Conread position: 50-442
Cow position: chrX:31495587-31495983 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 39

Conread position: 51-267
Cow position: chrX:16045823-16046037 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 155
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 81, 40

Conread position: 51-267
Cow position: chrX:29170930-29170717 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 165
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 40, 0

Conread position: 51-363
Cow position: chrX:20741704-20742022 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 51-403
Cow position: chrX:5375425-5375068 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 42

Conread position: 51-403
Cow position: chrX:39713402-39713760 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 51-411
Cow position: chrX:8640639-8641005 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 51-411
Cow position: chrX:22564833-22564470 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 40

Conread position: 51-414
Cow position: chrX:9011182-9011551 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 40

Conread position: 51-414
Cow position: chrX:9169754-9169394 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 49

Conread position: 51-414
Cow position: chrX:11146483-11146113 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 40

Conread position: 51-414
Cow position: chrX:12359736-12360108 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 40

Conread position: 51-414
Cow position: chrX:15978100-15977733 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 40

Conread position: 51-414
Cow position: chrX:17782352-17782720 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 8

Conread position: 51-414
Cow position: chrX:21767651-21768024 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 51-414
Cow position: chrX:27758560-27758928 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 51-435
Cow position: chrX:2047964-2048353 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 8

Conread position: 51-436
Cow position: chrX:20999417-20999035 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 49

Conread position: 51-441
Cow position: chrX:28879729-28879347 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 42

Conread position: 51-441
Cow position: chrX:41847678-41847283 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 42

Conread position: 51-442
Cow position: chrX:672140-671746 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 51-442
Cow position: chrX:3360673-3361068 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 232, 40

Conread position: 51-442
Cow position: chrX:4767550-4767938 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 42

Conread position: 51-442
Cow position: chrX:7551950-7551553 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 42

Conread position: 51-442
Cow position: chrX:10413123-10412727 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 42

Conread position: 51-442
Cow position: chrX:10867005-10866621 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 51-442
Cow position: chrX:16360156-16359760 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 51-442
Cow position: chrX:17054419-17054816 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 51-442
Cow position: chrX:18656954-18656558 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 51-442
Cow position: chrX:21389429-21389826 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 42

Conread position: 51-442
Cow position: chrX:21414718-21415115 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 42

Conread position: 51-442
Cow position: chrX:23022169-23022561 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 42

Conread position: 51-442
Cow position: chrX:23572966-23572568 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 19

Conread position: 51-442
Cow position: chrX:26530824-26531221 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 42

Conread position: 51-442
Cow position: chrX:27754279-27754676 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 51-442
Cow position: chrX:31201692-31202089 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 42

Conread position: 51-442
Cow position: chrX:42732723-42733120 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 51-443
Cow position: chrX:16325673-16325278 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 42

Conread position: 52-435
Cow position: chrX:9899484-9899102 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 41

Conread position: 52-442
Cow position: chrX:4623101-4622706 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 39

Conread position: 52-442
Cow position: chrX:14782493-14782098 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 39

Conread position: 52-442
Cow position: chrX:28606237-28605848 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 269
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 133, 41

Conread position: 53-435
Cow position: chrX:23986103-23986491 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 89

Conread position: 53-442
Cow position: chrX:29099272-29099665 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 40

Conread position: 63-442
Cow position: chrX:40693868-40693481 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 230, 30

Conread position: 92-442
Cow position: chrX:31261742-31261385 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 74

Conread position: 101-442
Cow position: chrX:39556890-39556547 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 195

Conread position: 102-441
Cow position: chrX:4481881-4482203 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 22

Conread position: 109-414
Cow position: chrX:28503242-28503556 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 0

Conread position: 128-443
Cow position: chrX:35023995-35024309 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 9

Conread position: 138-442
Cow position: chrX:12345831-12346143 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 308

Conread position: 149-414
Cow position: chrX:39185119-39185393 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 0

Conread position: 150-426
Cow position: chrX:25573300-25573585 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 201
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 124, 41

Conread position: 157-416
Cow position: chrX:29700987-29700721 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 68

Conread position: 161-358
Cow position: chrX:21750284-21750081 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 144
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 131, 0

Conread position: 161-442
Cow position: chrX:2649392-2649102 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 248

Conread position: 191-436
Cow position: chrX:21626710-21626459 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 241

Conread position: 201-442
Cow position: chrX:12465036-12465280 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 175
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 74, 0

Conread position: 201-442
Cow position: chrX:30135344-30135099 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 177
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 75, 207

Conread position: 207-442
Cow position: chrX:10301135-10301376 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 192
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 83, 47

Conread position: 209-442
Cow position: chrX:37117915-37118158 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 180
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 58, 0

Conread position: 210-442
Cow position: chrX:22125848-22125607 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 182
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 67, 155

Conread position: 215-414
Cow position: chrX:38330396-38330602 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 149
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 60, 165

Conread position: 230-442
Cow position: chrX:19877845-19878062 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 160
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 58, 121

Conread position: 238-440
Cow position: chrX:20790505-20790294 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 158
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 40, 0