Cow genome map
| Conread name: | rsug15_c22.y1 |
| Conread position: | 1-197 |
| Cow position: | chr1:44138552-44138361 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 136 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 1-266 |
| Cow position: | chr1:76044632-76044376 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 185, 139 |
| Conread position: | 1-442 |
| Cow position: | chr1:99021704-99021270 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 11 |
| Conread position: | 1-449 |
| Cow position: | chr1:19993428-19992985 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 184, 46 |
| Conread position: | 1-466 |
| Cow position: | chr1:93415895-93416344 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 342, 13 |
| Conread position: | 1-499 |
| Cow position: | chr1:29904815-29904316 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 348, 39 |
| Conread position: | 380-652 |
| Cow position: | chr1:31422059-31421778 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 199 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 28, 17 |
| Conread position: | 496-663 |
| Cow position: | chr1:38396564-38396728 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 129 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 8, 128 |
| Conread position: | 1-195 |
| Cow position: | chr10:24979028-24978832 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 153 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 1-428 |
| Cow position: | chr10:24314533-24314126 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 205, 52 |
| Conread position: | 1-445 |
| Cow position: | chr10:53363271-53363704 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 6-466 |
| Cow position: | chr10:39881998-39881542 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 338, 28 |
| Conread position: | 11-489 |
| Cow position: | chr10:21075653-21076111 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 42 |
| Conread position: | 462-645 |
| Cow position: | chr10:6260462-6260280 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 42, 81 |
| Conread position: | 464-657 |
| Cow position: | chr10:24977804-24977596 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 162 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 470-655 |
| Cow position: | chr10:64302798-64302604 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 34, 186 |
| Conread position: | 1-437 |
| Cow position: | chr11:44230027-44230458 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 124 |
| Conread position: | 1-466 |
| Cow position: | chr11:10218645-10218185 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 170 |
| Conread position: | 1-467 |
| Cow position: | chr11:9416726-9416271 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 334, 54 |
| Conread position: | 47-455 |
| Cow position: | chr11:36761051-36761452 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 297, 160 |
| Conread position: | 460-656 |
| Cow position: | chr11:44231086-44231287 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 44, 141 |
| Conread position: | 463-663 |
| Cow position: | chr11:13067087-13066878 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 41, 152 |
| Conread position: | 463-663 |
| Cow position: | chr11:13162922-13163132 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 41, 153 |
| Conread position: | 466-663 |
| Cow position: | chr11:36762056-36762259 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 143 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 20, 190 |
| Conread position: | 1-466 |
| Cow position: | chr13:30261231-30261684 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 202, 212 |
| Conread position: | 1-581 |
| Cow position: | chr13:34047626-34048205 (view UCSC Genome Browser custom track) |
| Alignm length: | 590 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 168, 52 |
| Conread position: | 56-498 |
| Cow position: | chr13:21130324-21130755 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 412, 164 |
| Conread position: | 67-466 |
| Cow position: | chr13:22186668-22186281 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 83 |
| Conread position: | 455-663 |
| Cow position: | chr13:21131348-21131570 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 49, 192 |
| Conread position: | 461-656 |
| Cow position: | chr13:22185560-22185368 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 140 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 1-437 |
| Cow position: | chr14:30707810-30707399 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 461-663 |
| Cow position: | chr14:42123045-42122840 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 161 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 43, 150 |
| Conread position: | 462-663 |
| Cow position: | chr14:38816293-38816083 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 156 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 42, 197 |
| Conread position: | 1-306 |
| Cow position: | chr15:20358627-20358338 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 202, 52 |
| Conread position: | 1-466 |
| Cow position: | chr15:32286146-32286590 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 2-442 |
| Cow position: | chr15:32671510-32671949 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 13 |
| Conread position: | 463-654 |
| Cow position: | chr15:30810544-30810734 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 148 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 41, 74 |
| Conread position: | 463-656 |
| Cow position: | chr15:20357368-20357173 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 39, 169 |
| Conread position: | 1-214 |
| Cow position: | chr16:20235189-20235403 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 21, 54 |
| Conread position: | 1-214 |
| Cow position: | chr16:34502707-34502912 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 1-238 |
| Cow position: | chr16:55080748-55080513 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 1-323 |
| Cow position: | chr16:41759551-41759223 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 53 |
| Conread position: | 1-333 |
| Cow position: | chr16:16819103-16818776 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 44 |
| Conread position: | 1-422 |
| Cow position: | chr16:25292872-25293281 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 1-455 |
| Cow position: | chr16:23873023-23872598 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 53 |
| Conread position: | 1-466 |
| Cow position: | chr16:14668805-14669258 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 218 |
| Conread position: | 1-498 |
| Cow position: | chr16:24155910-24155430 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 467, 52 |
| Conread position: | 71-442 |
| Cow position: | chr16:28439190-28438830 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 124 |
| Conread position: | 462-652 |
| Cow position: | chr16:28438211-28438020 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 48-224 |
| Cow position: | chr17:13894438-13894262 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 461-663 |
| Cow position: | chr17:15384027-15384230 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 43, 22 |
| Conread position: | 1-144 |
| Cow position: | chr18:9187832-9187693 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 461-654 |
| Cow position: | chr18:9186419-9186230 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 43, 52 |
| Conread position: | 461-656 |
| Cow position: | chr18:4885222-4885022 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 43, 190 |
| Conread position: | 1-466 |
| Cow position: | chr19:7450696-7450244 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 1-476 |
| Cow position: | chr19:7406121-7405665 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 456, 52 |
| Conread position: | 2-568 |
| Cow position: | chr19:42300215-42299675 (view UCSC Genome Browser custom track) |
| Alignm length: | 569 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 337, 12 |
| Conread position: | 50-497 |
| Cow position: | chr19:20111878-20111443 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 212, 112 |
| Conread position: | 1-319 |
| Cow position: | chr2:45924183-45923871 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 131, 52 |
| Conread position: | 1-322 |
| Cow position: | chr2:15581370-15581060 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 223 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 1-401 |
| Cow position: | chr2:4275235-4274837 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 52 |
| Conread position: | 460-663 |
| Cow position: | chr2:45968557-45968340 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 168 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 44, 163 |
| Conread position: | 461-663 |
| Cow position: | chr2:45921460-45921248 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 157 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 1-497 |
| Cow position: | chr20:19368047-19367546 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 57 |
| Conread position: | 48-473 |
| Cow position: | chr20:18328974-18328566 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 463-653 |
| Cow position: | chr20:18325234-18325041 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 41, 139 |
| Conread position: | 1-298 |
| Cow position: | chr21:3193400-3193691 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 212 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 78, 39 |
| Conread position: | 2-473 |
| Cow position: | chr21:993648-993187 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 341, 52 |
| Conread position: | 59-247 |
| Cow position: | chr21:23682839-23683025 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 144, 22 |
| Conread position: | 1-150 |
| Cow position: | chr22:36554353-36554205 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 114 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 1-349 |
| Cow position: | chr22:36593126-36592783 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 224 |
| Conread position: | 1-358 |
| Cow position: | chr22:12562996-12562638 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 251, 52 |
| Conread position: | 1-436 |
| Cow position: | chr22:10964396-10964819 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 1-445 |
| Cow position: | chr22:293947-293517 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 9 |
| Conread position: | 1-539 |
| Cow position: | chr22:35944194-35943667 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 409 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 462, 55 |
| Conread position: | 2-357 |
| Cow position: | chr22:299335-298986 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 168, 22 |
| Conread position: | 6-461 |
| Cow position: | chr22:8873079-8873534 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 72 |
| Conread position: | 462-654 |
| Cow position: | chr22:36580922-36580718 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 164 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 42, 160 |
| Conread position: | 462-658 |
| Cow position: | chr22:36552846-36552650 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 50, 38 |
| Conread position: | 1-436 |
| Cow position: | chr23:1322636-1322205 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 52 |
| Conread position: | 8-346 |
| Cow position: | chr23:6213947-6214278 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 463-663 |
| Cow position: | chr23:13509321-13509516 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 149 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 88, 41 |
| Conread position: | 466-663 |
| Cow position: | chr23:26836535-26836746 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-142 |
| Cow position: | chr24:14874197-14874056 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 109 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 501-663 |
| Cow position: | chr24:14872982-14872814 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 49, 108 |
| Conread position: | 1-257 |
| Cow position: | chr26:12581864-12582110 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 198 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 88, 18 |
| Conread position: | 1-315 |
| Cow position: | chr27:6012392-6012704 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 13 |
| Conread position: | 90-425 |
| Cow position: | chr27:24560501-24560827 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 239, 50 |
| Conread position: | 1-445 |
| Cow position: | chr28:10592120-10591682 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 200, 205 |
| Conread position: | 5-466 |
| Cow position: | chr28:29437878-29437437 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 334, 48 |
| Conread position: | 29-466 |
| Cow position: | chr28:8783366-8783799 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 169 |
| Conread position: | 490-656 |
| Cow position: | chr28:10230282-10230103 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 134 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 491-663 |
| Cow position: | chr28:29436921-29436739 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 137 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 24, 103 |
| Conread position: | 1-465 |
| Cow position: | chr29:16017921-16017461 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 462-656 |
| Cow position: | chr29:16016880-16016683 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 151 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 1-426 |
| Cow position: | chr3:37623876-37624283 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 1-442 |
| Cow position: | chr3:64820767-64821189 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 192, 52 |
| Conread position: | 456-656 |
| Cow position: | chr3:21304997-21304788 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 463-658 |
| Cow position: | chr3:49601754-49601552 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 24, 106 |
| Conread position: | 1-356 |
| Cow position: | chr4:970442-970097 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 243 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 1-466 |
| Cow position: | chr4:4175387-4175837 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 1-497 |
| Cow position: | chr4:1497811-1497336 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 199, 20 |
| Conread position: | 71-327 |
| Cow position: | chr4:24199106-24198861 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 178 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 115, 76 |
| Conread position: | 432-657 |
| Cow position: | chr4:1496796-1496566 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 165 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 54, 187 |
| Conread position: | 461-656 |
| Cow position: | chr4:4176416-4176625 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 539-653 |
| Cow position: | chr4:19093079-19093192 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 91 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 1-458 |
| Cow position: | chr5:58056705-58056260 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 47 |
| Conread position: | 70-455 |
| Cow position: | chr5:24109963-24109561 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 163 |
| Conread position: | 1-461 |
| Cow position: | chr6:10628745-10629207 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 47 |
| Conread position: | 1-480 |
| Cow position: | chr6:59479052-59478579 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 14 |
| Conread position: | 48-465 |
| Cow position: | chr6:6541980-6542372 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 172, 0 |
| Conread position: | 132-445 |
| Cow position: | chr6:34024149-34024451 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 0 |
| Conread position: | 461-629 |
| Cow position: | chr6:34025250-34025428 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 463-656 |
| Cow position: | chr6:6543188-6543390 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 147 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 1-318 |
| Cow position: | chr7:26849741-26850054 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 15 |
| Conread position: | 1-351 |
| Cow position: | chr7:41486618-41486948 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 248 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 134, 62 |
| Conread position: | 1-466 |
| Cow position: | chr7:30299398-30299858 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 52 |
| Conread position: | 1-473 |
| Cow position: | chr7:30120258-30119816 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 2-466 |
| Cow position: | chr7:41877206-41876763 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 37 |
| Conread position: | 6-306 |
| Cow position: | chr7:52386011-52385715 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 112 |
| Conread position: | 6-326 |
| Cow position: | chr7:53058512-53058199 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 182, 28 |
| Conread position: | 18-440 |
| Cow position: | chr7:49415306-49415726 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 257 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 29, 242 |
| Conread position: | 48-236 |
| Cow position: | chr7:42305498-42305314 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 450-663 |
| Cow position: | chr7:30302533-30302757 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 158 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 81, 129 |
| Conread position: | 451-663 |
| Cow position: | chr7:26851608-26851825 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 36, 204 |
| Conread position: | 461-652 |
| Cow position: | chr7:63951494-63951303 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 43, 150 |
| Conread position: | 463-630 |
| Cow position: | chr7:30119232-30119062 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 126 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 1-466 |
| Cow position: | chr8:39159756-39160219 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 52 |
| Conread position: | 463-656 |
| Cow position: | chr8:51328077-51328280 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 1-349 |
| Cow position: | chr9:16196793-16196454 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 298, 53 |
| Conread position: | 1-465 |
| Cow position: | chr9:29327134-29327590 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 42 |
| Conread position: | 1-532 |
| Cow position: | chr9:64158184-64158732 (view UCSC Genome Browser custom track) |
| Alignm length: | 554 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 252, 52 |
| Conread position: | 36-466 |
| Cow position: | chr9:59509739-59510156 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 299, 139 |
| Conread position: | 77-437 |
| Cow position: | chr9:54994474-54994828 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 176, 63 |
| Conread position: | 463-651 |
| Cow position: | chr9:29328446-29328639 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 1-401 |
| Cow position: | chrX:24115502-24115106 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 76 |
| Conread position: | 1-422 |
| Cow position: | chrX:41890364-41889953 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 149 |
| Conread position: | 1-467 |
| Cow position: | chrX:29799134-29798679 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 7-663 |
| Cow position: | chrX:6251599-6250980 (view UCSC Genome Browser custom track) |
| Alignm length: | 670 |
| Alignm identity: | 492 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 495, 58 |