Cow genome map

Conread name: rthg11_d24.y1

Conread position: 38-315
Cow position: chr10:60703713-60703988 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 206
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 78, 40

Conread position: 358-525
Cow position: chr10:57986638-57986806 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 120
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 87, 141

Conread position: 379-542
Cow position: chr10:28146999-28147164 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 123
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 65, 0

Conread position: 1-345
Cow position: chr11:49485859-49485515 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 242
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 110, 26

Conread position: 15-330
Cow position: chr11:35570235-35570549 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 217
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 82, 111

Conread position: 133-313
Cow position: chr11:34456848-34456660 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 133
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 21, 0

Conread position: 351-542
Cow position: chr11:6343162-6342970 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 132
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 94, 31

Conread position: 363-542
Cow position: chr11:62041146-62040967 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 130
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 82, 10

Conread position: 382-545
Cow position: chr11:58820055-58819891 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 121
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 62, 131

Conread position: 378-545
Cow position: chr12:42193193-42193027 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 126
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 66, 91

Conread position: 379-545
Cow position: chr12:41463832-41464000 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 129
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 65, 120

Conread position: 8-313
Cow position: chr13:46462689-46462410 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 204
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 19, 0

Conread position: 378-545
Cow position: chr13:24703665-24703834 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 125
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 66, 0

Conread position: 320-545
Cow position: chr14:40456975-40456757 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 163
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 43, 0

Conread position: 377-545
Cow position: chr14:39321463-39321296 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 123
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 66, 80

Conread position: 1-313
Cow position: chr15:23215797-23216114 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 216
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 113, 26

Conread position: 378-545
Cow position: chr15:38426774-38426606 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 123
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 66, 88

Conread position: 379-539
Cow position: chr15:46431025-46430873 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 125
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 66, 38

Conread position: 1-316
Cow position: chr16:39757128-39756821 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 204
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 55, 29

Conread position: 382-543
Cow position: chr16:4748599-4748770 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 130
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 15, 10

Conread position: 35-321
Cow position: chr17:20695325-20695033 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 201
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 77, 91

Conread position: 110-373
Cow position: chr17:16870218-16870476 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 170
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 14, 0

Conread position: 362-544
Cow position: chr17:23041203-23041027 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 132
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 10, 0

Conread position: 369-526
Cow position: chr17:11775386-11775541 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 122
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 76, 94

Conread position: 376-545
Cow position: chr18:14791363-14791532 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 119
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 67, 166

Conread position: 378-544
Cow position: chr18:23239858-23239691 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 123
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 84, 125

Conread position: 351-545
Cow position: chr19:5110241-5110437 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 135
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 12, 29

Conread position: 372-545
Cow position: chr19:4303629-4303455 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 128
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 75, 110

Conread position: 379-545
Cow position: chr19:55693665-55693832 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 120
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 70, 122

Conread position: 363-545
Cow position: chr2:38082600-38082778 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 136
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 141, 10

Conread position: 371-545
Cow position: chr2:1196993-1197166 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 128
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 26, 21

Conread position: 378-535
Cow position: chr2:83748759-83748917 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 118
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 66, 91

Conread position: 378-545
Cow position: chr2:1106672-1106837 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 130
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 69, 88

Conread position: 51-324
Cow position: chr20:19018110-19018381 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 183
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 63, 77

Conread position: 358-542
Cow position: chr20:28724803-28724619 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 131
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 87, 24

Conread position: 362-525
Cow position: chr20:12435352-12435516 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 120
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 83, 8

Conread position: 373-545
Cow position: chr20:2016774-2016943 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 122
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 84, 0

Conread position: 373-545
Cow position: chr20:5935974-5936146 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 129
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 70, 109

Conread position: 1-313
Cow position: chr21:44262657-44262348 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 211
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 263, 26

Conread position: 1-313
Cow position: chr21:47178811-47178503 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 210
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 48, 24

Conread position: 379-545
Cow position: chr21:78881-79048 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 128
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 15, 9

Conread position: 381-511
Cow position: chr21:30882182-30882050 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 104
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 63, 111

Conread position: 1-545
Cow position: chr22:32997243-32996711 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 362
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 339, 26

Conread position: 12-307
Cow position: chr22:41922592-41922311 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 212
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 72, 15

Conread position: 336-545
Cow position: chr22:22411432-22411221 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 157
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 18, 5

Conread position: 379-544
Cow position: chr22:8258948-8259123 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 129
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 66, 0

Conread position: 379-545
Cow position: chr22:13271186-13271021 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 128
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 18, 13

Conread position: 1-313
Cow position: chr23:40830893-40831196 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 214
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 113, 19

Conread position: 6-307
Cow position: chr23:10913899-10913609 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 205
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 272, 19

Conread position: 382-543
Cow position: chr23:35314437-35314599 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 129
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 66, 158

Conread position: 382-542
Cow position: chr24:39501548-39501710 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 122
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 56, 117

Conread position: 7-315
Cow position: chr25:17450625-17450925 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 20

Conread position: 338-545
Cow position: chr25:17450889-17451091 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 164
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 32, 0

Conread position: 375-544
Cow position: chr25:19410294-19410122 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 125
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 69, 0

Conread position: 28-312
Cow position: chr28:8965595-8965871 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 194
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 225, 30

Conread position: 378-545
Cow position: chr28:17249576-17249741 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 130
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 65, 47

Conread position: 1-331
Cow position: chr29:4083214-4083543 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 233
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 83, 28

Conread position: 27-313
Cow position: chr29:43552517-43552804 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 196
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 67, 82

Conread position: 320-543
Cow position: chr3:62837033-62837247 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 162
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 103, 37

Conread position: 362-495
Cow position: chr3:72864132-72864265 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 104
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 83, 11

Conread position: 379-545
Cow position: chr3:58856109-58855944 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 125
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 65, 90

Conread position: 362-525
Cow position: chr4:358595-358431 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 120
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 83, 13

Conread position: 341-524
Cow position: chr5:41229209-41229395 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 137
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 31, 159

Conread position: 7-369
Cow position: chr6:52977915-52978272 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 230
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 218, 28

Conread position: 348-545
Cow position: chr6:1765663-1765469 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 141
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 98, 25

Conread position: 362-525
Cow position: chr6:3485449-3485613 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 125
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 81, 20

Conread position: 8-313
Cow position: chr7:6207922-6207626 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 215
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 141, 19

Conread position: 379-534
Cow position: chr7:43368568-43368724 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 121
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 46, 105

Conread position: 379-544
Cow position: chr7:35867398-35867562 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 128
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 65, 90

Conread position: 381-530
Cow position: chr7:30043006-30042860 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 63, 88

Conread position: 382-545
Cow position: chr7:1214659-1214494 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 118
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 63, 0

Conread position: 371-529
Cow position: chr8:46097546-46097386 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 119
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 76, 0

Conread position: 1-306
Cow position: chr9:20506279-20505987 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 212
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 271, 26

Conread position: 61-391
Cow position: chr9:26087883-26088212 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 220
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 212, 54

Conread position: 378-543
Cow position: chr9:3438443-3438277 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 126
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 66, 133

Conread position: 379-544
Cow position: chr9:49117607-49117439 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 125
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 65, 121

Conread position: 1-324
Cow position: chrX:37753510-37753192 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 218
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 96, 26

Conread position: 1-350
Cow position: chrX:16858585-16858936 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 248
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 106, 26

Conread position: 110-331
Cow position: chrX:164893-164663 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 166
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 24, 6

Conread position: 320-545
Cow position: chrX:39387652-39387865 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 161
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 185, 44

Conread position: 327-545
Cow position: chrX:20589481-20589273 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 168
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 70, 44

Conread position: 333-542
Cow position: chrX:2607234-2607025 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 147
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 111, 40

Conread position: 338-545
Cow position: chrX:23269378-23269583 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 151
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 113, 35

Conread position: 352-538
Cow position: chrX:18460306-18460490 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 134
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 16, 115

Conread position: 353-545
Cow position: chrX:22963729-22963917 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 136
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 93, 20

Conread position: 362-545
Cow position: chrX:37904832-37904649 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 139
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 35, 11

Conread position: 363-545
Cow position: chrX:17260082-17260262 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 132
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 82, 10

Conread position: 378-545
Cow position: chrX:164678-164509 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 123
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 66, 0

Conread position: 378-545
Cow position: chrX:302890-302725 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 127
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 66, 91

Conread position: 378-545
Cow position: chrX:387905-387739 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 129
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 19, 14

Conread position: 378-545
Cow position: chrX:19541575-19541742 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 121
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 66, 105

Conread position: 379-545
Cow position: chrX:25016416-25016578 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 123
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 25, 13