Cow genome map

Conread name: rtra01_c16r1.y1

Conread position: 1-415
Cow position: chr1:98658554-98658159 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 286
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 190, 56

Conread position: 1-431
Cow position: chr1:3384591-3384160 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 53

Conread position: 1-431
Cow position: chr1:57365007-57364564 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 13

Conread position: 1-431
Cow position: chr1:76620136-76619700 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 73

Conread position: 1-431
Cow position: chr1:81777788-81778225 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 128

Conread position: 1-431
Cow position: chr1:99914790-99915214 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 105

Conread position: 11-373
Cow position: chr1:89733154-89732799 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 227
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 181, 36

Conread position: 13-429
Cow position: chr1:25551317-25551747 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 49

Conread position: 14-319
Cow position: chr1:5319737-5320042 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 210
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 5, 82

Conread position: 15-428
Cow position: chr1:87969675-87970084 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 263
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 178, 20

Conread position: 15-431
Cow position: chr1:30074229-30074649 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 54

Conread position: 15-431
Cow position: chr1:67909907-67910326 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 15

Conread position: 15-431
Cow position: chr1:69404362-69404779 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 22

Conread position: 16-431
Cow position: chr1:79455598-79455176 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 46

Conread position: 18-431
Cow position: chr1:33713427-33713860 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 29

Conread position: 19-398
Cow position: chr1:50248342-50247961 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 70

Conread position: 19-431
Cow position: chr1:61541653-61542054 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 268
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 20, 78

Conread position: 20-431
Cow position: chr1:42737798-42738207 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 26

Conread position: 36-431
Cow position: chr1:33552308-33552716 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 22

Conread position: 37-431
Cow position: chr1:3933876-3933481 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 20

Conread position: 37-431
Cow position: chr1:26517509-26517110 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 21

Conread position: 37-431
Cow position: chr1:62243273-62242874 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 21

Conread position: 37-431
Cow position: chr1:72185500-72185097 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 21

Conread position: 37-431
Cow position: chr1:72984854-72985229 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 278
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 7, 21

Conread position: 37-431
Cow position: chr1:74285296-74284900 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 20

Conread position: 37-431
Cow position: chr1:91891739-91891342 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 21

Conread position: 54-431
Cow position: chr1:28874460-28874847 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 20

Conread position: 82-431
Cow position: chr1:24442939-24442581 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 14

Conread position: 82-431
Cow position: chr1:55778011-55778365 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 14

Conread position: 82-431
Cow position: chr1:65387738-65388091 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 14

Conread position: 82-431
Cow position: chr1:93855936-93856291 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 14

Conread position: 85-431
Cow position: chr1:73069637-73069281 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 11

Conread position: 87-318
Cow position: chr1:80445578-80445819 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 182
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 69, 9

Conread position: 87-431
Cow position: chr1:52357832-52357480 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 48

Conread position: 90-431
Cow position: chr1:56724572-56724923 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 298

Conread position: 92-346
Cow position: chr1:86595062-86594798 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 87

Conread position: 96-430
Cow position: chr1:77923142-77923486 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 293

Conread position: 100-398
Cow position: chr1:29412742-29412450 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 59

Conread position: 106-429
Cow position: chr1:12060759-12060430 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 12

Conread position: 106-431
Cow position: chr1:32566477-32566152 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 12

Conread position: 109-427
Cow position: chr1:94661120-94661444 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 281

Conread position: 110-372
Cow position: chr1:72945194-72945455 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 170
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 69, 49

Conread position: 110-403
Cow position: chr1:34694132-34694440 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 175

Conread position: 110-403
Cow position: chr1:55320623-55320330 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 90

Conread position: 110-428
Cow position: chr1:61590747-61590416 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 222
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 47, 76

Conread position: 110-430
Cow position: chr1:50210393-50210064 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 277

Conread position: 110-431
Cow position: chr1:24652715-24653043 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 292

Conread position: 110-431
Cow position: chr1:82367225-82367539 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 228
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 47, 65

Conread position: 111-406
Cow position: chr1:31401999-31401720 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 208
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 81, 48

Conread position: 112-282
Cow position: chr1:5356579-5356759 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 133
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 44, 118

Conread position: 112-429
Cow position: chr1:55275579-55275254 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 222

Conread position: 112-429
Cow position: chr1:82565564-82565890 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 275

Conread position: 112-430
Cow position: chr1:17011284-17010960 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 121

Conread position: 112-430
Cow position: chr1:33852720-33853047 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 305

Conread position: 112-430
Cow position: chr1:40056555-40056882 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 275

Conread position: 112-430
Cow position: chr1:59207628-59207301 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 294

Conread position: 112-430
Cow position: chr1:67002609-67002931 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 132

Conread position: 112-430
Cow position: chr1:71561294-71560967 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 275

Conread position: 112-430
Cow position: chr1:85793132-85793459 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 275

Conread position: 112-430
Cow position: chr1:86546686-86546359 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 70

Conread position: 112-431
Cow position: chr1:26584551-26584878 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 215

Conread position: 112-431
Cow position: chr1:30533569-30533243 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 49

Conread position: 112-431
Cow position: chr1:40683291-40682963 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 288

Conread position: 112-431
Cow position: chr1:63604320-63603992 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 283

Conread position: 112-431
Cow position: chr1:76750522-76750193 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 282

Conread position: 116-261
Cow position: chr1:101013013-101012857 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 123
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 39, 0

Conread position: 118-374
Cow position: chr1:11859300-11859039 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 11

Conread position: 120-429
Cow position: chr1:22619204-22618896 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 259

Conread position: 121-353
Cow position: chr1:77115211-77114960 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 191
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 38, 0

Conread position: 121-427
Cow position: chr1:18240765-18240458 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 110

Conread position: 121-429
Cow position: chr1:29035760-29036075 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 173

Conread position: 121-431
Cow position: chr1:21088892-21089210 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 60

Conread position: 121-431
Cow position: chr1:48248372-48248682 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 80

Conread position: 121-431
Cow position: chr1:72082224-72082535 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 38

Conread position: 121-431
Cow position: chr1:77463117-77463420 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 216
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 65, 109

Conread position: 121-431
Cow position: chr1:79635532-79635220 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 132

Conread position: 121-431
Cow position: chr1:81862526-81862204 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 269

Conread position: 121-431
Cow position: chr1:82922698-82922385 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 50

Conread position: 122-431
Cow position: chr1:33897721-33898039 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 265

Conread position: 122-431
Cow position: chr1:91900482-91900801 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 267

Conread position: 136-351
Cow position: chr1:53365022-53365237 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 65

Conread position: 136-431
Cow position: chr1:18964894-18964589 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 252

Conread position: 151-431
Cow position: chr1:25053787-25054066 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 256

Conread position: 151-431
Cow position: chr1:27112934-27112657 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 201
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 42, 88

Conread position: 155-431
Cow position: chr1:77105521-77105248 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 207
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 38, 147

Conread position: 168-431
Cow position: chr1:102323311-102323061 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 197
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 30, 51

Conread position: 243-430
Cow position: chr1:82911236-82911051 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 151
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 133, 163

Conread position: 243-431
Cow position: chr1:18194103-18194289 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 149
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 133, 141

Conread position: 251-431
Cow position: chr1:27542733-27542915 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 136
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 126, 60

Conread position: 255-428
Cow position: chr1:57696347-57696176 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 125
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 28, 0

Conread position: 261-431
Cow position: chr1:19184710-19184536 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 141
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 95, 151

Conread position: 279-429
Cow position: chr1:38476937-38477085 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 122
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 97, 105

Conread position: 289-431
Cow position: chr1:21996376-21996237 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 109
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 89, 43

Conread position: 308-431
Cow position: chr1:67287996-67288117 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 100
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 69, 0

Conread position: 1-350
Cow position: chr10:32558727-32559068 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 237
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 152, 36

Conread position: 1-431
Cow position: chr10:32702110-32702557 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 153

Conread position: 12-390
Cow position: chr10:10583495-10583884 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 35

Conread position: 15-403
Cow position: chr10:68160260-68159863 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 22

Conread position: 15-423
Cow position: chr10:54930830-54930422 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 22

Conread position: 15-430
Cow position: chr10:8291423-8291843 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 58

Conread position: 15-431
Cow position: chr10:1378876-1379297 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 22

Conread position: 15-431
Cow position: chr10:14334459-14334045 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 47

Conread position: 15-431
Cow position: chr10:22102614-22103033 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 22

Conread position: 15-431
Cow position: chr10:29631422-29630994 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 22

Conread position: 15-431
Cow position: chr10:29845270-29844857 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 44

Conread position: 16-431
Cow position: chr10:22346339-22346760 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 43

Conread position: 18-431
Cow position: chr10:37771268-37771685 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 33

Conread position: 19-431
Cow position: chr10:30684109-30683690 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 40

Conread position: 20-431
Cow position: chr10:39439535-39439953 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 40

Conread position: 37-431
Cow position: chr10:2119599-2119210 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 21

Conread position: 37-431
Cow position: chr10:21488360-21488757 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 21

Conread position: 37-431
Cow position: chr10:57988592-57988194 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 21

Conread position: 43-431
Cow position: chr10:38343948-38343565 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 14

Conread position: 43-431
Cow position: chr10:38722499-38722901 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 269
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 27, 17

Conread position: 43-431
Cow position: chr10:62407368-62406981 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 14

Conread position: 96-236
Cow position: chr10:50136025-50136170 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 113
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 58, 0

Conread position: 96-398
Cow position: chr10:38544433-38544123 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 106

Conread position: 98-305
Cow position: chr10:5256606-5256388 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 168
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 60, 0

Conread position: 99-431
Cow position: chr10:20369639-20369312 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 61

Conread position: 103-428
Cow position: chr10:46183915-46184243 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 222
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 19, 59

Conread position: 106-248
Cow position: chr10:36512051-36512197 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 113
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 49, 21

Conread position: 110-326
Cow position: chr10:53320922-53320705 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 162
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 82, 103

Conread position: 110-402
Cow position: chr10:28946947-28947235 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 209
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 77, 49

Conread position: 110-405
Cow position: chr10:58376834-58376538 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 217
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 45, 191

Conread position: 110-430
Cow position: chr10:10172206-10172535 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 277

Conread position: 110-431
Cow position: chr10:40641426-40641744 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 222
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 49, 15

Conread position: 112-340
Cow position: chr10:39181269-39181508 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 183
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 45, 0

Conread position: 112-429
Cow position: chr10:39778648-39778333 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 32

Conread position: 112-430
Cow position: chr10:21739282-21738956 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 204

Conread position: 112-430
Cow position: chr10:28255943-28255608 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 313

Conread position: 112-430
Cow position: chr10:57555862-57555535 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 275

Conread position: 112-431
Cow position: chr10:41568574-41568902 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 275

Conread position: 112-431
Cow position: chr10:44708138-44707816 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 226

Conread position: 115-346
Cow position: chr10:21517501-21517268 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 179
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 9, 132

Conread position: 121-401
Cow position: chr10:46196540-46196812 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 202
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 73, 40

Conread position: 121-430
Cow position: chr10:25651947-25651629 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 266

Conread position: 121-431
Cow position: chr10:29109504-29109184 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 282

Conread position: 121-431
Cow position: chr10:39039816-39039515 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 38

Conread position: 122-431
Cow position: chr10:14805329-14805644 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 265

Conread position: 123-427
Cow position: chr10:7280626-7280308 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 275

Conread position: 125-333
Cow position: chr10:20382544-20382330 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 125-431
Cow position: chr10:31525223-31525529 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 15

Conread position: 129-430
Cow position: chr10:41158903-41159213 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 259

Conread position: 131-431
Cow position: chr10:22644493-22644799 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 138

Conread position: 134-431
Cow position: chr10:23409748-23409449 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 115

Conread position: 151-431
Cow position: chr10:16927184-16927471 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 239

Conread position: 168-431
Cow position: chr10:21898594-21898331 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 191
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 26, 10

Conread position: 179-400
Cow position: chr10:42114075-42114287 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 149
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 67, 0

Conread position: 179-431
Cow position: chr10:19143066-19142815 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 14

Conread position: 232-430
Cow position: chr10:20515032-20515230 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 147
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 6, 104

Conread position: 1-403
Cow position: chr11:73134313-73134718 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 103

Conread position: 1-431
Cow position: chr11:29667583-29667154 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 105

Conread position: 2-431
Cow position: chr11:31927155-31927596 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 45

Conread position: 6-431
Cow position: chr11:58135401-58135829 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 56

Conread position: 10-430
Cow position: chr11:26548541-26548968 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 27

Conread position: 11-430
Cow position: chr11:44582328-44581903 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 49

Conread position: 12-431
Cow position: chr11:23249457-23249029 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 18

Conread position: 13-429
Cow position: chr11:1489154-1488733 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 76

Conread position: 15-240
Cow position: chr11:28053626-28053391 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 164
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 48, 32

Conread position: 15-396
Cow position: chr11:11989149-11989538 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 22

Conread position: 15-431
Cow position: chr11:24394332-24394754 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 40

Conread position: 19-431
Cow position: chr11:85392812-85392393 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 52

Conread position: 23-242
Cow position: chr11:44156233-44156009 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 160
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 133, 14

Conread position: 37-415
Cow position: chr11:10848494-10848875 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 21

Conread position: 37-427
Cow position: chr11:72309996-72309603 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 21

Conread position: 37-431
Cow position: chr11:23881073-23881462 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 21

Conread position: 37-431
Cow position: chr11:41169654-41169252 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 21

Conread position: 43-431
Cow position: chr11:19101444-19101049 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 14

Conread position: 84-400
Cow position: chr11:50949244-50948914 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 231
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 17, 228

Conread position: 85-431
Cow position: chr11:4026521-4026171 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 11

Conread position: 96-374
Cow position: chr11:4034297-4034012 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 205
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 60, 30

Conread position: 110-296
Cow position: chr11:25865728-25865537 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 144
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 83, 0

Conread position: 110-338
Cow position: chr11:52808470-52808701 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 163
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 81, 49

Conread position: 110-389
Cow position: chr11:26073855-26073568 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 200

Conread position: 110-430
Cow position: chr11:17106571-17106242 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 277

Conread position: 110-430
Cow position: chr11:66730197-66730526 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 86

Conread position: 110-431
Cow position: chr11:17281369-17281038 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 291

Conread position: 110-431
Cow position: chr11:26069935-26069605 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 8

Conread position: 110-431
Cow position: chr11:64355925-64356240 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 51

Conread position: 112-316
Cow position: chr11:1494921-1494716 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 146
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 43, 85

Conread position: 112-424
Cow position: chr11:76372888-76372597 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 235
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 43, 102

Conread position: 112-430
Cow position: chr11:44517751-44517426 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 107

Conread position: 112-431
Cow position: chr11:9156038-9155717 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 199

Conread position: 112-431
Cow position: chr11:20733125-20732793 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 282

Conread position: 112-431
Cow position: chr11:26123814-26123478 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 273

Conread position: 112-431
Cow position: chr11:47759167-47758838 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 236

Conread position: 112-431
Cow position: chr11:53430918-53430592 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 276

Conread position: 112-431
Cow position: chr11:63654221-63653892 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 276

Conread position: 116-431
Cow position: chr11:11590087-11590407 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 216

Conread position: 121-430
Cow position: chr11:32452950-32453271 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 269

Conread position: 121-430
Cow position: chr11:50836546-50836228 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 266

Conread position: 121-430
Cow position: chr11:67154802-67155117 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 233

Conread position: 122-404
Cow position: chr11:31754925-31754645 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 199
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 36, 122

Conread position: 122-430
Cow position: chr11:19062954-19062637 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 281

Conread position: 122-431
Cow position: chr11:38834325-38834007 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 271

Conread position: 139-431
Cow position: chr11:4055186-4054896 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 242

Conread position: 175-427
Cow position: chr11:31863269-31863523 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 235

Conread position: 180-430
Cow position: chr11:63647251-63647501 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 179
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 124, 59

Conread position: 232-431
Cow position: chr11:4268936-4268737 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 157
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 6, 163

Conread position: 251-431
Cow position: chr11:40405790-40405612 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 150
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 125, 155

Conread position: 1-430
Cow position: chr12:23140876-23140444 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 105

Conread position: 15-429
Cow position: chr12:27931602-27931182 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 22

Conread position: 15-431
Cow position: chr12:42858233-42857807 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 60

Conread position: 19-426
Cow position: chr12:20996782-20996364 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 291
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 8, 32

Conread position: 31-431
Cow position: chr12:1776634-1776237 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 38

Conread position: 43-431
Cow position: chr12:22204377-22203985 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 14

Conread position: 82-431
Cow position: chr12:11099597-11099962 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 258
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 77, 14

Conread position: 82-431
Cow position: chr12:27854592-27854237 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 14

Conread position: 96-430
Cow position: chr12:24994580-24994236 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 292

Conread position: 110-368
Cow position: chr12:17967210-17967481 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 202
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 43, 130

Conread position: 110-431
Cow position: chr12:21210062-21210391 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 278

Conread position: 111-431
Cow position: chr12:28005284-28005599 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 232
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 78, 48

Conread position: 112-430
Cow position: chr12:3362341-3362661 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 86

Conread position: 112-430
Cow position: chr12:21429408-21429735 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 275

Conread position: 120-431
Cow position: chr12:6405228-6404911 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 139

Conread position: 139-301
Cow position: chr12:20844023-20844191 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 130
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 16, 0

Conread position: 175-431
Cow position: chr12:3209446-3209697 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 189
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 66, 49

Conread position: 175-431
Cow position: chr12:20461758-20461502 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 211

Conread position: 178-431
Cow position: chr12:25099000-25098748 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 180
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 39, 16

Conread position: 179-431
Cow position: chr12:21253109-21252858 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 190
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 59, 18

Conread position: 181-431
Cow position: chr12:43913317-43913566 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 12

Conread position: 257-431
Cow position: chr12:33120964-33121145 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 135
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 120, 0

Conread position: 7-431
Cow position: chr13:34342981-34343414 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 54

Conread position: 15-429
Cow position: chr13:34041251-34040827 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 22

Conread position: 15-431
Cow position: chr13:31611225-31610809 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 45

Conread position: 19-431
Cow position: chr13:47575169-47575600 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 23

Conread position: 27-431
Cow position: chr13:11797594-11797199 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 66

Conread position: 37-431
Cow position: chr13:35758395-35758788 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 21

Conread position: 85-430
Cow position: chr13:31508064-31508413 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 11

Conread position: 87-422
Cow position: chr13:17309618-17309962 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 300

Conread position: 96-430
Cow position: chr13:6358288-6358631 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 291

Conread position: 96-430
Cow position: chr13:49974830-49975183 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 231

Conread position: 96-431
Cow position: chr13:32984180-32983836 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 288

Conread position: 105-431
Cow position: chr13:60423928-60424256 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 13

Conread position: 106-339
Cow position: chr13:25692848-25693092 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 185
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 51, 19

Conread position: 106-431
Cow position: chr13:4942561-4942893 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 12

Conread position: 106-431
Cow position: chr13:42090515-42090185 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 12

Conread position: 110-390
Cow position: chr13:20541078-20540784 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 110-430
Cow position: chr13:21697442-21697771 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 277

Conread position: 110-431
Cow position: chr13:11793903-11793570 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 39

Conread position: 112-403
Cow position: chr13:60468606-60468910 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 209

Conread position: 112-430
Cow position: chr13:33524776-33524449 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 276

Conread position: 112-430
Cow position: chr13:42217502-42217175 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 275

Conread position: 112-431
Cow position: chr13:3653133-3652800 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 289

Conread position: 112-431
Cow position: chr13:5500818-5500491 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 274

Conread position: 112-431
Cow position: chr13:13901048-13901373 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 121

Conread position: 112-431
Cow position: chr13:16253336-16253009 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 280

Conread position: 112-431
Cow position: chr13:31732713-31732387 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 134

Conread position: 112-431
Cow position: chr13:32735990-32735684 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 86

Conread position: 120-430
Cow position: chr13:50193207-50192891 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 127

Conread position: 121-362
Cow position: chr13:31690953-31690719 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 170
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 34, 88

Conread position: 121-374
Cow position: chr13:2387616-2387352 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 0

Conread position: 121-431
Cow position: chr13:6666944-6666631 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 25

Conread position: 121-431
Cow position: chr13:9045950-9046256 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 237
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 71, 41

Conread position: 121-431
Cow position: chr13:33335121-33334813 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 38

Conread position: 121-431
Cow position: chr13:43981894-43981577 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 48

Conread position: 129-431
Cow position: chr13:34938638-34938946 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 183

Conread position: 136-389
Cow position: chr13:34324371-34324109 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 187-431
Cow position: chr13:9298710-9298954 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 199

Conread position: 251-431
Cow position: chr13:19128305-19128128 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 128
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 126, 100

Conread position: 279-431
Cow position: chr13:53553167-53553020 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 122
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 59, 0

Conread position: 294-430
Cow position: chr13:15543974-15544109 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 114
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 82, 96

Conread position: 310-431
Cow position: chr13:20574032-20573911 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 99
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 66, 98

Conread position: 1-398
Cow position: chr14:25692913-25693299 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 37

Conread position: 1-429
Cow position: chr14:12742101-12741665 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 60

Conread position: 2-431
Cow position: chr14:18417456-18417887 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 76

Conread position: 9-386
Cow position: chr14:13579339-13579706 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 262
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 5, 29

Conread position: 9-429
Cow position: chr14:44552793-44553212 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 26

Conread position: 10-431
Cow position: chr14:5530016-5530441 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 41

Conread position: 13-267
Cow position: chr14:50111758-50112025 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 185
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 15, 60

Conread position: 15-415
Cow position: chr14:43559195-43559605 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 58

Conread position: 15-431
Cow position: chr14:11153191-11152769 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 60

Conread position: 15-431
Cow position: chr14:17687457-17687879 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 47

Conread position: 15-431
Cow position: chr14:19327304-19326879 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 35

Conread position: 18-261
Cow position: chr14:44690032-44690280 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 179
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 24, 56

Conread position: 21-415
Cow position: chr14:12611383-12611777 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 10

Conread position: 21-431
Cow position: chr14:47643257-47643670 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 276
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 64, 6

Conread position: 37-430
Cow position: chr14:13779936-13780334 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 21

Conread position: 37-431
Cow position: chr14:16918733-16918338 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 21

Conread position: 37-431
Cow position: chr14:17000072-16999668 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 21

Conread position: 37-431
Cow position: chr14:20783452-20783851 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 21

Conread position: 43-431
Cow position: chr14:29775111-29774739 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 270
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 29, 161

Conread position: 82-430
Cow position: chr14:22030419-22030067 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 14

Conread position: 82-431
Cow position: chr14:15274812-15274458 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 14

Conread position: 84-431
Cow position: chr14:191074-191433 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 6

Conread position: 85-321
Cow position: chr14:44227406-44227652 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 185
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 74, 11

Conread position: 85-398
Cow position: chr14:44255728-44255430 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 219
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 21, 11

Conread position: 85-405
Cow position: chr14:13834169-13834498 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 216
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 60, 11

Conread position: 87-430
Cow position: chr14:751598-751947 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 9

Conread position: 97-431
Cow position: chr14:35930637-35930969 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 62

Conread position: 100-403
Cow position: chr14:9046622-9046938 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 0

Conread position: 106-374
Cow position: chr14:45207336-45207608 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 204
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 53, 11

Conread position: 106-431
Cow position: chr14:33678115-33678445 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 11

Conread position: 110-248
Cow position: chr14:40342114-40342259 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 114
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 50, 0

Conread position: 110-340
Cow position: chr14:10147928-10148169 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 186
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 46, 0

Conread position: 110-358
Cow position: chr14:27990556-27990317 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 184
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 83, 15

Conread position: 110-405
Cow position: chr14:12124129-12123820 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 110-430
Cow position: chr14:45670982-45670649 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 110-431
Cow position: chr14:11476234-11475907 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 304

Conread position: 110-431
Cow position: chr14:18105481-18105805 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 218
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 82, 131

Conread position: 110-431
Cow position: chr14:45710675-45710355 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 91

Conread position: 112-429
Cow position: chr14:27978411-27978737 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 275

Conread position: 112-430
Cow position: chr14:1659511-1659837 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 274

Conread position: 112-430
Cow position: chr14:16808267-16807940 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 269

Conread position: 112-431
Cow position: chr14:5513986-5514310 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 138

Conread position: 112-431
Cow position: chr14:7473407-7473735 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 283

Conread position: 112-431
Cow position: chr14:48826333-48826658 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 278

Conread position: 120-431
Cow position: chr14:45027938-45027619 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 31

Conread position: 121-305
Cow position: chr14:13274666-13274865 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 147
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 35, 0

Conread position: 121-430
Cow position: chr14:37454869-37454559 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 232
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 73, 33

Conread position: 121-431
Cow position: chr14:13863032-13862719 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 264

Conread position: 121-431
Cow position: chr14:17759827-17759515 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 120

Conread position: 121-431
Cow position: chr14:37225222-37225539 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 47

Conread position: 121-431
Cow position: chr14:48253250-48252944 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 230
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 48, 40

Conread position: 252-431
Cow position: chr14:47656592-47656762 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 131
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 125, 104

Conread position: 261-431
Cow position: chr14:13462672-13462839 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 144
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 115, 99

Conread position: 1-427
Cow position: chr15:35736753-35737172 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 57

Conread position: 1-431
Cow position: chr15:32712191-32712618 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 91

Conread position: 2-431
Cow position: chr15:2588505-2588066 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 35

Conread position: 7-431
Cow position: chr15:1833686-1833258 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 98

Conread position: 8-431
Cow position: chr15:21450630-21451076 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 299
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 19, 43

Conread position: 10-430
Cow position: chr15:24288516-24288080 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 298
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 46, 27

Conread position: 10-431
Cow position: chr15:6591162-6590734 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 27

Conread position: 15-390
Cow position: chr15:51675673-51676065 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 58

Conread position: 15-430
Cow position: chr15:4386713-4387137 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 46

Conread position: 15-431
Cow position: chr15:2077620-2078030 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 47

Conread position: 15-431
Cow position: chr15:4766148-4766574 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 58

Conread position: 15-431
Cow position: chr15:51218680-51219105 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 15

Conread position: 19-431
Cow position: chr15:3260361-3259940 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 28

Conread position: 23-402
Cow position: chr15:9003251-9002866 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 256
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 57, 15

Conread position: 26-399
Cow position: chr15:36668680-36669056 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 27

Conread position: 37-430
Cow position: chr15:25654084-25653680 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 21

Conread position: 37-431
Cow position: chr15:4923128-4923526 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 21

Conread position: 37-431
Cow position: chr15:7838251-7838650 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 21

Conread position: 37-431
Cow position: chr15:18577700-18578096 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 21

Conread position: 37-431
Cow position: chr15:19737073-19736674 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 21

Conread position: 37-431
Cow position: chr15:24296074-24296468 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 20

Conread position: 37-431
Cow position: chr15:51613127-51613518 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 271
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 79, 59

Conread position: 43-411
Cow position: chr15:7261594-7261962 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 14

Conread position: 50-431
Cow position: chr15:35752309-35751924 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 7

Conread position: 82-431
Cow position: chr15:6154902-6154546 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 14

Conread position: 85-431
Cow position: chr15:53339251-53339604 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 11

Conread position: 85-431
Cow position: chr15:53409945-53410288 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 11

Conread position: 87-420
Cow position: chr15:24718355-24718694 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 244
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 13, 76

Conread position: 87-430
Cow position: chr15:107030-107381 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 9

Conread position: 87-430
Cow position: chr15:41659197-41659548 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 9

Conread position: 106-431
Cow position: chr15:32067558-32067228 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 12

Conread position: 107-427
Cow position: chr15:6114639-6114965 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 234
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 52, 141

Conread position: 110-335
Cow position: chr15:20361038-20360806 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 0

Conread position: 110-379
Cow position: chr15:6079797-6080075 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 0

Conread position: 110-381
Cow position: chr15:7892296-7892013 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 110-389
Cow position: chr15:4141683-4141395 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 137

Conread position: 110-397
Cow position: chr15:1830532-1830251 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 210
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 78, 49

Conread position: 110-427
Cow position: chr15:7929629-7929946 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 225
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 48, 220

Conread position: 110-430
Cow position: chr15:2646598-2646273 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 137

Conread position: 110-431
Cow position: chr15:1767893-1768209 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 19

Conread position: 110-431
Cow position: chr15:4672485-4672814 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 188

Conread position: 110-431
Cow position: chr15:17149175-17149492 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 221
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 62, 85

Conread position: 111-431
Cow position: chr15:18331781-18331452 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 249

Conread position: 112-305
Cow position: chr15:6485633-6485836 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 152
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 47, 0

Conread position: 112-403
Cow position: chr15:2013612-2013917 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 0

Conread position: 112-429
Cow position: chr15:18266722-18266386 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 241
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 43, 149

Conread position: 112-430
Cow position: chr15:7564050-7564378 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 276

Conread position: 112-431
Cow position: chr15:1765376-1765697 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 30

Conread position: 112-431
Cow position: chr15:4726255-4726583 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 283

Conread position: 112-431
Cow position: chr15:5010578-5010251 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 275

Conread position: 112-431
Cow position: chr15:14581307-14580978 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 112-431
Cow position: chr15:20411651-20411977 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 270

Conread position: 112-431
Cow position: chr15:21664685-21664361 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 278

Conread position: 112-431
Cow position: chr15:32492830-32492502 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 281

Conread position: 115-415
Cow position: chr15:329393-329698 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 116

Conread position: 121-389
Cow position: chr15:611231-610945 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 210
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 37, 80

Conread position: 121-395
Cow position: chr15:3008780-3008498 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 264

Conread position: 121-402
Cow position: chr15:8751462-8751750 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 33

Conread position: 121-429
Cow position: chr15:6279541-6279853 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 167

Conread position: 121-430
Cow position: chr15:4197529-4197847 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 266

Conread position: 121-430
Cow position: chr15:6561649-6561967 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 266

Conread position: 121-430
Cow position: chr15:35646616-35646303 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 276

Conread position: 121-431
Cow position: chr15:4652435-4652759 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 121-431
Cow position: chr15:4813660-4813971 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 229
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 58, 25

Conread position: 121-431
Cow position: chr15:4916236-4916554 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 237
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 38, 92

Conread position: 121-431
Cow position: chr15:32719599-32719299 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 72

Conread position: 122-431
Cow position: chr15:2901198-2900879 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 267

Conread position: 122-431
Cow position: chr15:9912168-9911855 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 139

Conread position: 148-431
Cow position: chr15:3890002-3890285 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 53

Conread position: 150-431
Cow position: chr15:58749-59033 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 207
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 9, 80

Conread position: 151-431
Cow position: chr15:4686824-4687111 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 237

Conread position: 151-431
Cow position: chr15:36624752-36624476 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 131

Conread position: 152-389
Cow position: chr15:32479501-32479255 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 170
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 6, 0

Conread position: 162-431
Cow position: chr15:8698820-8698553 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 193
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 26, 47

Conread position: 177-430
Cow position: chr15:368520-368273 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 81

Conread position: 179-431
Cow position: chr15:13390191-13389943 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 177
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 11, 0

Conread position: 239-431
Cow position: chr15:31859765-31859575 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 159
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 167

Conread position: 1-431
Cow position: chr16:12537332-12536913 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 46

Conread position: 2-431
Cow position: chr16:23535290-23534862 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 72

Conread position: 6-431
Cow position: chr16:16270529-16270098 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 21

Conread position: 13-429
Cow position: chr16:2410322-2409897 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 24

Conread position: 13-431
Cow position: chr16:10438871-10439297 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 49

Conread position: 15-242
Cow position: chr16:23251811-23251573 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 169
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 29, 58

Conread position: 15-295
Cow position: chr16:406423-406132 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 207
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 27, 22

Conread position: 15-431
Cow position: chr16:837932-838351 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 15

Conread position: 15-431
Cow position: chr16:1432804-1433223 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 22

Conread position: 15-431
Cow position: chr16:1566834-1566425 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 15

Conread position: 15-431
Cow position: chr16:7675835-7675419 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 35

Conread position: 15-431
Cow position: chr16:15567873-15568296 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 62

Conread position: 15-431
Cow position: chr16:16228938-16229346 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 15

Conread position: 15-431
Cow position: chr16:40295546-40295128 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 58

Conread position: 15-431
Cow position: chr16:54324722-54324290 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 72

Conread position: 18-431
Cow position: chr16:25342588-25343010 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 58

Conread position: 25-431
Cow position: chr16:37480229-37479817 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 34

Conread position: 37-431
Cow position: chr16:23983940-23984341 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 21

Conread position: 37-431
Cow position: chr16:27732742-27732343 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 21

Conread position: 84-431
Cow position: chr16:2238080-2237732 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 12

Conread position: 84-431
Cow position: chr16:19149911-19149563 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 73

Conread position: 85-430
Cow position: chr16:51084840-51085195 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 11

Conread position: 85-431
Cow position: chr16:15185763-15186117 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 11

Conread position: 88-431
Cow position: chr16:33218-33570 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 151

Conread position: 88-431
Cow position: chr16:51403190-51402837 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 218

Conread position: 95-430
Cow position: chr16:18667082-18667420 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 212

Conread position: 106-431
Cow position: chr16:5485436-5485762 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 12

Conread position: 110-372
Cow position: chr16:16898169-16898435 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 15

Conread position: 110-390
Cow position: chr16:32937231-32937513 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 204
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 47, 169

Conread position: 110-431
Cow position: chr16:1860943-1861274 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 293

Conread position: 110-431
Cow position: chr16:3330648-3330968 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 49

Conread position: 110-431
Cow position: chr16:23671415-23671747 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 52

Conread position: 112-430
Cow position: chr16:40557234-40556897 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 0

Conread position: 112-431
Cow position: chr16:2726502-2726176 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 279

Conread position: 112-431
Cow position: chr16:10374885-10374563 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 129

Conread position: 112-431
Cow position: chr16:20202686-20203014 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 13

Conread position: 112-431
Cow position: chr16:25442342-25442668 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 306

Conread position: 112-431
Cow position: chr16:28470359-28470023 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 291

Conread position: 121-336
Cow position: chr16:49255511-49255287 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 0

Conread position: 121-373
Cow position: chr16:16520048-16519788 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 140

Conread position: 121-388
Cow position: chr16:2482414-2482137 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 161

Conread position: 121-428
Cow position: chr16:49221184-49220882 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 75

Conread position: 121-429
Cow position: chr16:41762546-41762855 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 226
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 72, 38

Conread position: 121-430
Cow position: chr16:3088484-3088166 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 266

Conread position: 121-430
Cow position: chr16:19778929-19778614 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 98

Conread position: 121-430
Cow position: chr16:27594227-27594545 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 266

Conread position: 121-431
Cow position: chr16:8815385-8815069 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 174

Conread position: 121-431
Cow position: chr16:10967369-10967063 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 230
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 71, 42

Conread position: 121-431
Cow position: chr16:14665093-14664774 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 297

Conread position: 121-431
Cow position: chr16:25456761-25456442 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 299

Conread position: 122-430
Cow position: chr16:16240566-16240256 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 221
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 37, 124

Conread position: 142-431
Cow position: chr16:25258544-25258841 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 91

Conread position: 151-360
Cow position: chr16:29034697-29034908 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 168
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 0

Conread position: 250-431
Cow position: chr16:23251112-23250942 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 140
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 7, 127

Conread position: 1-397
Cow position: chr17:22133444-22133848 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 77

Conread position: 1-430
Cow position: chr17:2169610-2170029 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 280
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 30, 84

Conread position: 2-429
Cow position: chr17:5227793-5228232 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 53

Conread position: 9-430
Cow position: chr17:23038754-23039184 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 33

Conread position: 10-345
Cow position: chr17:2580803-2581151 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 246
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 9, 70

Conread position: 13-431
Cow position: chr17:24028813-24028389 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 7

Conread position: 15-431
Cow position: chr17:6069738-6070156 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 22

Conread position: 18-431
Cow position: chr17:20086575-20086163 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 29

Conread position: 37-431
Cow position: chr17:3640690-3640292 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 21

Conread position: 82-427
Cow position: chr17:40806065-40806416 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 8

Conread position: 82-431
Cow position: chr17:14240761-14241117 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 14

Conread position: 85-430
Cow position: chr17:6261120-6261471 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 11

Conread position: 85-431
Cow position: chr17:29302016-29302370 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 11

Conread position: 96-431
Cow position: chr17:11086455-11086114 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 66

Conread position: 106-294
Cow position: chr17:20230558-20230748 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 150
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 50, 11

Conread position: 106-431
Cow position: chr17:4083299-4083626 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 19

Conread position: 106-431
Cow position: chr17:15326560-15326892 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 12

Conread position: 110-299
Cow position: chr17:33284562-33284375 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 145
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 45, 84

Conread position: 110-427
Cow position: chr17:20403702-20404027 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 263

Conread position: 110-430
Cow position: chr17:13967210-13967538 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 202

Conread position: 110-430
Cow position: chr17:39049498-39049829 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 277

Conread position: 110-431
Cow position: chr17:21418846-21419167 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 227
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 12, 8

Conread position: 112-430
Cow position: chr17:2263426-2263751 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 68

Conread position: 112-430
Cow position: chr17:9080135-9079809 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 280

Conread position: 112-431
Cow position: chr17:182861-183184 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 206

Conread position: 112-431
Cow position: chr17:2246796-2246473 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 238

Conread position: 118-431
Cow position: chr17:16121288-16120993 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 234
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 41, 9

Conread position: 121-283
Cow position: chr17:22559259-22559423 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 131
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 38, 76

Conread position: 121-388
Cow position: chr17:150597-150338 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 191
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 253, 33

Conread position: 121-427
Cow position: chr17:14936676-14936363 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 47

Conread position: 121-430
Cow position: chr17:3654995-3654677 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 266

Conread position: 121-431
Cow position: chr17:2077700-2077379 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 232
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 34, 287

Conread position: 121-431
Cow position: chr17:19267537-19267232 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 41

Conread position: 121-431
Cow position: chr17:20489615-20489917 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 225
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 77, 12

Conread position: 121-431
Cow position: chr17:24783456-24783775 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 254

Conread position: 121-431
Cow position: chr17:27793487-27793170 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 264

Conread position: 121-431
Cow position: chr17:28027212-28026894 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 295

Conread position: 122-431
Cow position: chr17:20080586-20080283 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 185

Conread position: 133-431
Cow position: chr17:42266974-42267269 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 218
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 61, 26

Conread position: 151-431
Cow position: chr17:9751039-9751319 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 195
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 87, 21

Conread position: 186-431
Cow position: chr17:135998-136241 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 220

Conread position: 243-430
Cow position: chr17:19980709-19980524 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 150
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 146, 0

Conread position: 275-431
Cow position: chr17:22561356-22561509 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 127
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 102, 117

Conread position: 275-431
Cow position: chr17:34159186-34159339 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 127
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 101, 52

Conread position: 282-430
Cow position: chr17:33284222-33284080 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 121
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 94, 15

Conread position: 7-431
Cow position: chr18:51482247-51482675 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 30

Conread position: 10-315
Cow position: chr18:54022734-54022425 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 218
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 46, 26

Conread position: 13-431
Cow position: chr18:33270315-33270720 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 291
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 7, 35

Conread position: 15-431
Cow position: chr18:27988583-27989007 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 22

Conread position: 15-431
Cow position: chr18:28972489-28972065 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 26

Conread position: 31-429
Cow position: chr18:4947371-4947766 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 6

Conread position: 37-431
Cow position: chr18:16089542-16089941 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 21

Conread position: 37-431
Cow position: chr18:23799072-23799465 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 21

Conread position: 81-430
Cow position: chr18:37507424-37507783 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 15

Conread position: 85-336
Cow position: chr18:2646054-2645805 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 179
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 94, 11

Conread position: 85-430
Cow position: chr18:24617606-24617953 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 14

Conread position: 85-431
Cow position: chr18:35054596-35054945 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 252

Conread position: 87-431
Cow position: chr18:32769199-32769543 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 244
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 26, 17

Conread position: 100-428
Cow position: chr18:14421764-14422094 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 213
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 92, 47

Conread position: 110-334
Cow position: chr18:38342801-38342578 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 174
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 43, 66

Conread position: 110-431
Cow position: chr18:19485634-19485964 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 106

Conread position: 112-380
Cow position: chr18:26245129-26244849 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 0

Conread position: 112-389
Cow position: chr18:33752193-33752478 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 218

Conread position: 112-430
Cow position: chr18:25352757-25353082 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 49

Conread position: 112-431
Cow position: chr18:51461557-51461229 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 284

Conread position: 112-431
Cow position: chr18:54170013-54169702 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 245
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 47, 137

Conread position: 121-431
Cow position: chr18:36510119-36510438 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 195

Conread position: 121-431
Cow position: chr18:51695204-51695524 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 272

Conread position: 128-431
Cow position: chr18:27538372-27538684 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 247

Conread position: 130-430
Cow position: chr18:51343194-51343503 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 236

Conread position: 6-430
Cow position: chr19:12774496-12774929 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 56

Conread position: 7-431
Cow position: chr19:892241-891813 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 23

Conread position: 9-402
Cow position: chr19:28405313-28404925 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 104

Conread position: 15-429
Cow position: chr19:39184140-39183720 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 60

Conread position: 15-430
Cow position: chr19:5730263-5730669 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 16

Conread position: 18-430
Cow position: chr19:438034-437614 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 54

Conread position: 19-431
Cow position: chr19:33874825-33875237 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 32

Conread position: 82-431
Cow position: chr19:4387081-4387427 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 14

Conread position: 82-431
Cow position: chr19:28580203-28579840 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 14

Conread position: 85-431
Cow position: chr19:173730-174085 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 11

Conread position: 85-431
Cow position: chr19:1587769-1587411 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 11

Conread position: 96-430
Cow position: chr19:16319147-16318804 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 291

Conread position: 96-431
Cow position: chr19:166646-166304 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 238
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 63, 250

Conread position: 109-429
Cow position: chr19:376217-375899 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 121

Conread position: 110-320
Cow position: chr19:40816013-40815794 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 166
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 65, 0

Conread position: 110-339
Cow position: chr19:23400728-23400505 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 157
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 61, 109

Conread position: 112-429
Cow position: chr19:1583749-1584077 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 282

Conread position: 112-431
Cow position: chr19:774102-774430 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 275

Conread position: 112-431
Cow position: chr19:28595034-28595363 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 234
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 82, 47

Conread position: 121-430
Cow position: chr19:2272606-2272292 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 269

Conread position: 121-431
Cow position: chr19:32204776-32205082 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 221
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 36, 51

Conread position: 121-431
Cow position: chr19:33943074-33943393 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 272

Conread position: 121-431
Cow position: chr19:39392022-39392335 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 40

Conread position: 121-431
Cow position: chr19:39667035-39666720 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 86

Conread position: 121-431
Cow position: chr19:40850952-40850643 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 187

Conread position: 121-431
Cow position: chr19:40886227-40885916 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 48

Conread position: 123-431
Cow position: chr19:9706666-9706338 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 234
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 32, 57

Conread position: 1-431
Cow position: chr2:6880205-6880627 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 198

Conread position: 1-431
Cow position: chr2:13044861-13044439 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 96

Conread position: 1-431
Cow position: chr2:34563820-34563404 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 102

Conread position: 1-431
Cow position: chr2:43445799-43446229 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 105

Conread position: 1-431
Cow position: chr2:44934140-44933723 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 45

Conread position: 2-431
Cow position: chr2:24926253-24926683 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 56

Conread position: 2-431
Cow position: chr2:53330617-53331072 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 123

Conread position: 7-314
Cow position: chr2:25743381-25743692 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 215
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 30, 53

Conread position: 9-431
Cow position: chr2:54693785-54694206 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 77

Conread position: 15-404
Cow position: chr2:24471785-24471386 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 17

Conread position: 15-430
Cow position: chr2:10264562-10264143 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 47

Conread position: 15-431
Cow position: chr2:36981234-36981658 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 60

Conread position: 15-431
Cow position: chr2:42669862-42669433 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 58

Conread position: 15-431
Cow position: chr2:52063609-52064028 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 22

Conread position: 18-429
Cow position: chr2:5903490-5903076 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 45

Conread position: 18-431
Cow position: chr2:10185380-10184957 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 44

Conread position: 26-431
Cow position: chr2:780557-780138 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 362

Conread position: 32-431
Cow position: chr2:32065170-32064769 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 18

Conread position: 37-431
Cow position: chr2:281813-281417 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 20

Conread position: 37-431
Cow position: chr2:24925439-24925834 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 21

Conread position: 82-431
Cow position: chr2:11158207-11157852 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 14

Conread position: 82-431
Cow position: chr2:16901169-16901524 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 14

Conread position: 84-431
Cow position: chr2:81258089-81258445 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 310

Conread position: 85-431
Cow position: chr2:32656560-32656903 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 16

Conread position: 85-431
Cow position: chr2:47811764-47812119 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 83

Conread position: 87-424
Cow position: chr2:3323651-3323303 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 290

Conread position: 87-430
Cow position: chr2:8119460-8119810 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 234

Conread position: 93-431
Cow position: chr2:16074613-16074271 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 66

Conread position: 96-431
Cow position: chr2:36052099-36051757 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 24

Conread position: 106-431
Cow position: chr2:25887612-25887280 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 12

Conread position: 110-248
Cow position: chr2:41154757-41154905 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 113
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 49, 0

Conread position: 110-366
Cow position: chr2:51618199-51618469 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 110-430
Cow position: chr2:26904817-26904505 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 236
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 46, 194

Conread position: 110-430
Cow position: chr2:32458120-32457792 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 49

Conread position: 111-403
Cow position: chr2:12363046-12362738 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 127

Conread position: 112-271
Cow position: chr2:17424800-17424970 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 131
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 43, 0

Conread position: 112-430
Cow position: chr2:9908855-9909191 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 0

Conread position: 112-430
Cow position: chr2:9958132-9957805 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 275

Conread position: 112-430
Cow position: chr2:10610704-10610377 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 280

Conread position: 112-430
Cow position: chr2:39422566-39422891 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 275

Conread position: 112-430
Cow position: chr2:47037492-47037164 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 275

Conread position: 112-431
Cow position: chr2:6005904-6005580 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 218

Conread position: 112-431
Cow position: chr2:12223336-12223009 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 280

Conread position: 112-431
Cow position: chr2:34052099-34052431 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 238

Conread position: 112-431
Cow position: chr2:41687709-41688036 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 235

Conread position: 112-431
Cow position: chr2:50982199-50981879 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 56

Conread position: 120-431
Cow position: chr2:15575903-15575578 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 291

Conread position: 121-294
Cow position: chr2:44990355-44990167 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 150
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 121-318
Cow position: chr2:33794919-33794714 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 150
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 71, 0

Conread position: 121-389
Cow position: chr2:16291634-16291914 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 101

Conread position: 121-427
Cow position: chr2:26922377-26922692 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 266

Conread position: 121-427
Cow position: chr2:45938746-45938437 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 267

Conread position: 121-431
Cow position: chr2:14823995-14824304 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 172

Conread position: 121-431
Cow position: chr2:28648658-28648340 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 278

Conread position: 121-431
Cow position: chr2:55483203-55482892 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 213

Conread position: 121-431
Cow position: chr2:80291813-80291494 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 274

Conread position: 122-291
Cow position: chr2:63291030-63290856 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 138
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 33, 120

Conread position: 150-348
Cow position: chr2:51397989-51397784 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 150
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 44, 184

Conread position: 151-286
Cow position: chr2:31300125-31300267 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 113
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 40, 63

Conread position: 155-431
Cow position: chr2:42361281-42361001 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 160

Conread position: 160-431
Cow position: chr2:32639936-32640213 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 232

Conread position: 179-431
Cow position: chr2:12479248-12478992 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 14

Conread position: 231-431
Cow position: chr2:210971-210772 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 159
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 145, 159

Conread position: 251-431
Cow position: chr2:53005156-53004978 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 146
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 125, 133

Conread position: 255-431
Cow position: chr2:31454557-31454732 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 129
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 79, 0

Conread position: 265-431
Cow position: chr2:25022005-25022171 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 134
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 111, 125

Conread position: 280-431
Cow position: chr2:67188728-67188875 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 97, 0

Conread position: 9-390
Cow position: chr20:27870558-27870957 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 55

Conread position: 15-430
Cow position: chr20:15293351-15293767 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 32

Conread position: 15-431
Cow position: chr20:5536305-5536731 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 32

Conread position: 15-431
Cow position: chr20:25849459-25849043 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 25

Conread position: 15-431
Cow position: chr20:28162192-28162612 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 42

Conread position: 15-431
Cow position: chr20:29949891-29950312 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 15

Conread position: 27-421
Cow position: chr20:8972798-8972401 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 10

Conread position: 43-431
Cow position: chr20:17660346-17659957 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 14

Conread position: 47-430
Cow position: chr20:30686968-30687371 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 29

Conread position: 60-431
Cow position: chr20:35126067-35126443 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 24

Conread position: 84-431
Cow position: chr20:21717857-21718221 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 12

Conread position: 85-431
Cow position: chr20:20753369-20753032 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 245
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 70, 16

Conread position: 110-282
Cow position: chr20:19356224-19356398 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 137
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 128, 0

Conread position: 112-349
Cow position: chr20:12569962-12570215 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 195
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 47, 0

Conread position: 112-431
Cow position: chr20:15096434-15096106 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 148

Conread position: 112-431
Cow position: chr20:16178304-16177961 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 296

Conread position: 112-431
Cow position: chr20:19439375-19439703 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 276

Conread position: 120-429
Cow position: chr20:23800352-23800669 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 103

Conread position: 120-431
Cow position: chr20:9547115-9547433 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 172

Conread position: 121-430
Cow position: chr20:20441483-20441165 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 285

Conread position: 121-430
Cow position: chr20:30429739-30430058 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 267

Conread position: 121-431
Cow position: chr20:9344424-9344733 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 22

Conread position: 121-431
Cow position: chr20:23468198-23467881 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 270

Conread position: 129-431
Cow position: chr20:13678364-13678053 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 273

Conread position: 140-431
Cow position: chr20:24615412-24615124 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 192

Conread position: 151-430
Cow position: chr20:41364145-41363857 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 216
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 41, 165

Conread position: 155-431
Cow position: chr20:15066957-15067238 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 219
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 38, 203

Conread position: 1-431
Cow position: chr21:28613806-28614212 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 46

Conread position: 1-431
Cow position: chr21:30597997-30597571 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 59

Conread position: 2-431
Cow position: chr21:40270207-40269773 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 37

Conread position: 7-317
Cow position: chr21:21520089-21520390 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 211
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 62, 29

Conread position: 7-431
Cow position: chr21:5018606-5019041 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 54

Conread position: 9-431
Cow position: chr21:9893456-9893867 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 89

Conread position: 15-427
Cow position: chr21:30563148-30563559 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 60

Conread position: 15-430
Cow position: chr21:1286739-1286303 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 22

Conread position: 15-431
Cow position: chr21:10568178-10568597 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 22

Conread position: 15-431
Cow position: chr21:31514840-31514418 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 60

Conread position: 16-431
Cow position: chr21:2417688-2418103 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 62

Conread position: 18-429
Cow position: chr21:147404-147817 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 41

Conread position: 18-431
Cow position: chr21:47942425-47942846 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 29

Conread position: 31-431
Cow position: chr21:997341-996938 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 23

Conread position: 37-430
Cow position: chr21:39426571-39426962 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 275
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 7, 36

Conread position: 37-431
Cow position: chr21:33253683-33254080 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 21

Conread position: 37-431
Cow position: chr21:47646834-47647231 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 21

Conread position: 82-380
Cow position: chr21:5839644-5839353 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 216
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 77, 14

Conread position: 82-431
Cow position: chr21:27069418-27069065 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 14

Conread position: 82-431
Cow position: chr21:27285011-27285353 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 14

Conread position: 85-431
Cow position: chr21:36979365-36979003 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 241
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 72, 16

Conread position: 87-430
Cow position: chr21:6414477-6414126 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 9

Conread position: 96-431
Cow position: chr21:2512404-2512748 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 146

Conread position: 96-431
Cow position: chr21:34655390-34655729 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 66

Conread position: 101-431
Cow position: chr21:2712478-2712795 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 152

Conread position: 106-431
Cow position: chr21:361231-361571 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 19

Conread position: 110-305
Cow position: chr21:34822641-34822435 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 161
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 46, 0

Conread position: 110-430
Cow position: chr21:33710718-33711047 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 277

Conread position: 110-430
Cow position: chr21:38802006-38802335 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 277

Conread position: 110-431
Cow position: chr21:468468-468798 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 240
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 49, 186

Conread position: 110-431
Cow position: chr21:31250581-31250892 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 90

Conread position: 112-267
Cow position: chr21:35145323-35145481 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 122
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 81, 18

Conread position: 112-285
Cow position: chr21:12054446-12054262 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 144
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 44, 0

Conread position: 112-429
Cow position: chr21:26635586-26635260 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 263

Conread position: 112-430
Cow position: chr21:11507185-11507512 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 281

Conread position: 112-430
Cow position: chr21:19612331-19612658 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 275

Conread position: 112-431
Cow position: chr21:3780345-3780673 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 121

Conread position: 117-428
Cow position: chr21:20743052-20742744 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 205
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 121, 69

Conread position: 117-431
Cow position: chr21:13298171-13298490 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 228

Conread position: 121-285
Cow position: chr21:45783052-45783225 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 130
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 42, 0

Conread position: 121-427
Cow position: chr21:4588423-4588120 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 116

Conread position: 121-431
Cow position: chr21:26849438-26849132 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 217
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 19, 54

Conread position: 122-431
Cow position: chr21:6626110-6626431 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 285

Conread position: 123-431
Cow position: chr21:37372817-37373125 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 74

Conread position: 132-356
Cow position: chr21:2673091-2672869 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 168
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 106, 66

Conread position: 151-431
Cow position: chr21:30654-30927 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 221

Conread position: 151-431
Cow position: chr21:26649085-26648815 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 0

Conread position: 168-431
Cow position: chr21:44764319-44764055 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 74

Conread position: 251-431
Cow position: chr21:1194168-1194335 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 137
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 125, 42

Conread position: 1-368
Cow position: chr22:12730411-12730027 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 65

Conread position: 1-403
Cow position: chr22:8737030-8736647 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 18

Conread position: 7-431
Cow position: chr22:522098-521663 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 55

Conread position: 8-429
Cow position: chr22:44518340-44517914 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 27

Conread position: 8-430
Cow position: chr22:41474392-41473979 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 273
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 136, 60

Conread position: 15-431
Cow position: chr22:13773824-13774242 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 68

Conread position: 15-431
Cow position: chr22:21035087-21034667 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 72

Conread position: 15-431
Cow position: chr22:34169643-34170062 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 22

Conread position: 15-431
Cow position: chr22:44397737-44398157 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 44

Conread position: 24-431
Cow position: chr22:37292355-37291949 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 11

Conread position: 29-430
Cow position: chr22:46614626-46615029 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 8

Conread position: 37-431
Cow position: chr22:39468185-39467788 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 21

Conread position: 42-431
Cow position: chr22:6333048-6333438 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 15

Conread position: 43-431
Cow position: chr22:44935304-44935690 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 14

Conread position: 82-431
Cow position: chr22:296816-297178 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 297

Conread position: 82-431
Cow position: chr22:1281363-1281007 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 14

Conread position: 82-431
Cow position: chr22:36860177-36859821 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 14

Conread position: 83-431
Cow position: chr22:10908465-10908109 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 304

Conread position: 100-431
Cow position: chr22:30677326-30676986 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 288

Conread position: 106-431
Cow position: chr22:16202309-16202640 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 12

Conread position: 108-430
Cow position: chr22:23752309-23751984 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 7

Conread position: 110-322
Cow position: chr22:44478143-44478363 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 170
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 81, 0

Conread position: 110-405
Cow position: chr22:3305200-3304899 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 114

Conread position: 110-430
Cow position: chr22:11807343-11807021 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 227

Conread position: 110-431
Cow position: chr22:1268355-1268025 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 101

Conread position: 110-431
Cow position: chr22:13766764-13767091 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 38

Conread position: 110-431
Cow position: chr22:15352271-15352598 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 238

Conread position: 110-431
Cow position: chr22:38960504-38960835 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 8

Conread position: 111-431
Cow position: chr22:29011874-29011547 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 279

Conread position: 112-271
Cow position: chr22:44366706-44366537 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 128
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 47, 31

Conread position: 112-325
Cow position: chr22:24951957-24952181 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 175
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 47, 0

Conread position: 112-415
Cow position: chr22:37268567-37268877 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 225
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 45, 252

Conread position: 112-430
Cow position: chr22:3276957-3276630 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 276

Conread position: 112-430
Cow position: chr22:11803651-11803326 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 69

Conread position: 112-430
Cow position: chr22:27308378-27308051 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 263

Conread position: 112-430
Cow position: chr22:35670265-35669944 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 198

Conread position: 112-431
Cow position: chr22:15310540-15310230 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 227
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 49, 136

Conread position: 112-431
Cow position: chr22:46585164-46584841 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 68

Conread position: 117-430
Cow position: chr22:30128988-30129305 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 267

Conread position: 117-430
Cow position: chr22:30146637-30146954 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 267

Conread position: 121-429
Cow position: chr22:1323565-1323876 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 119

Conread position: 121-430
Cow position: chr22:1880213-1880531 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 267

Conread position: 121-431
Cow position: chr22:1519614-1519305 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 38

Conread position: 121-431
Cow position: chr22:15852832-15853149 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 284

Conread position: 121-431
Cow position: chr22:31333639-31333321 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 273

Conread position: 151-431
Cow position: chr22:34601035-34601314 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 86

Conread position: 153-431
Cow position: chr22:29037116-29037389 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 178

Conread position: 226-431
Cow position: chr22:28783637-28783841 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 162
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 12, 92

Conread position: 229-431
Cow position: chr22:34609210-34609418 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 149
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 107, 7

Conread position: 231-428
Cow position: chr22:9273900-9274091 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 145
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 8, 78

Conread position: 251-431
Cow position: chr22:44459202-44459384 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 145
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 125, 0

Conread position: 255-431
Cow position: chr22:48274785-48274617 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 137
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 42, 0

Conread position: 1-431
Cow position: chr23:30237579-30238015 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 111

Conread position: 7-299
Cow position: chr23:2718604-2718907 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 209
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 47, 30

Conread position: 15-375
Cow position: chr23:1022657-1022276 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 269
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 68, 82

Conread position: 15-390
Cow position: chr23:22167946-22168326 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 22

Conread position: 15-430
Cow position: chr23:965195-964772 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 15

Conread position: 15-431
Cow position: chr23:11780083-11780503 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 15

Conread position: 19-431
Cow position: chr23:15218574-15218164 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 39

Conread position: 19-431
Cow position: chr23:16497936-16497529 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 288
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 89, 38

Conread position: 25-431
Cow position: chr23:2793945-2793547 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 34

Conread position: 37-431
Cow position: chr23:2759226-2759622 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 21

Conread position: 37-431
Cow position: chr23:15526902-15527304 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 21

Conread position: 37-431
Cow position: chr23:22145981-22145582 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 21

Conread position: 82-431
Cow position: chr23:20154859-20154503 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 14

Conread position: 82-431
Cow position: chr23:31164172-31164525 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 14

Conread position: 96-431
Cow position: chr23:36029998-36029660 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 258

Conread position: 100-430
Cow position: chr23:5873188-5872849 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 293

Conread position: 110-350
Cow position: chr23:38691885-38692136 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 110-430
Cow position: chr23:7314304-7314633 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 277

Conread position: 110-430
Cow position: chr23:23172172-23172499 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 275

Conread position: 110-430
Cow position: chr23:41141833-41141504 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 277

Conread position: 110-431
Cow position: chr23:15876170-15875844 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 224
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 47, 25

Conread position: 112-431
Cow position: chr23:1957564-1957884 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 226

Conread position: 112-431
Cow position: chr23:3879690-3879362 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 283

Conread position: 112-431
Cow position: chr23:28218821-28219158 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 0

Conread position: 112-431
Cow position: chr23:28304311-28304639 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 281

Conread position: 115-387
Cow position: chr23:4435051-4435337 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 209
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 44, 0

Conread position: 121-430
Cow position: chr23:4818428-4818746 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 19

Conread position: 121-430
Cow position: chr23:32351357-32351039 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 282

Conread position: 121-431
Cow position: chr23:16055176-16055495 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 268

Conread position: 121-431
Cow position: chr23:19490956-19491275 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 274

Conread position: 122-431
Cow position: chr23:4890092-4890406 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 162

Conread position: 130-389
Cow position: chr23:8287354-8287623 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 257

Conread position: 136-348
Cow position: chr23:16613764-16613545 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 169
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 20, 181

Conread position: 178-390
Cow position: chr23:25677826-25677619 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 60

Conread position: 1-431
Cow position: chr24:6353531-6353948 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 105

Conread position: 6-431
Cow position: chr24:6323975-6323537 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 45

Conread position: 8-431
Cow position: chr24:12238665-12239103 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 26

Conread position: 15-288
Cow position: chr24:14389144-14388872 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 187
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 140, 22

Conread position: 15-387
Cow position: chr24:8606206-8606593 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 15

Conread position: 15-431
Cow position: chr24:9545444-9545869 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 60

Conread position: 15-431
Cow position: chr24:16560925-16560497 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 22

Conread position: 15-431
Cow position: chr24:35869179-35868776 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 67

Conread position: 15-431
Cow position: chr24:38585729-38585322 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 63

Conread position: 51-430
Cow position: chr24:12334301-12333926 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 18

Conread position: 82-430
Cow position: chr24:19834861-19835219 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 14

Conread position: 82-431
Cow position: chr24:147155-146796 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 14

Conread position: 82-431
Cow position: chr24:14755455-14755812 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 14

Conread position: 85-362
Cow position: chr24:17322151-17322437 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 275

Conread position: 87-403
Cow position: chr24:44018970-44019297 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 9

Conread position: 100-431
Cow position: chr24:38639000-38639342 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 64

Conread position: 106-431
Cow position: chr24:9090572-9090247 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 106

Conread position: 106-431
Cow position: chr24:22972544-22972878 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 12

Conread position: 107-374
Cow position: chr24:5991743-5991467 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 11

Conread position: 110-389
Cow position: chr24:310351-310642 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 0

Conread position: 110-428
Cow position: chr24:5776915-5776591 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 221
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 82, 116

Conread position: 111-431
Cow position: chr24:36558066-36557757 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 90

Conread position: 112-315
Cow position: chr24:16083295-16083080 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 163
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 43, 0

Conread position: 112-321
Cow position: chr24:6435969-6436189 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 169
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 47, 0

Conread position: 112-430
Cow position: chr24:6023602-6023276 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 282

Conread position: 112-431
Cow position: chr24:4414057-4413742 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 47

Conread position: 116-431
Cow position: chr24:14383138-14382816 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 64

Conread position: 121-289
Cow position: chr24:12699329-12699150 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 140
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 35, 0

Conread position: 121-302
Cow position: chr24:6142567-6142756 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 150
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 35, 0

Conread position: 121-404
Cow position: chr24:6337879-6338171 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 8

Conread position: 121-430
Cow position: chr24:13044133-13043815 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 266

Conread position: 121-431
Cow position: chr24:17409962-17410272 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 220
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 121, 40

Conread position: 121-431
Cow position: chr24:29188785-29189099 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 38

Conread position: 122-303
Cow position: chr24:11151741-11151549 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 151
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 37, 0

Conread position: 122-426
Cow position: chr24:6036485-6036797 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 195

Conread position: 151-425
Cow position: chr24:19469072-19468801 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 64

Conread position: 154-431
Cow position: chr24:20286382-20286099 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 231

Conread position: 229-431
Cow position: chr24:40468781-40468986 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 163
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 9, 159

Conread position: 239-431
Cow position: chr24:23094401-23094210 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 152
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 137, 168

Conread position: 243-431
Cow position: chr24:25438229-25438415 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 154
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 134, 163

Conread position: 285-431
Cow position: chr24:23097093-23096950 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 111
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 91, 24

Conread position: 1-431
Cow position: chr25:13782392-13782823 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 41

Conread position: 7-431
Cow position: chr25:12941328-12940897 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 66

Conread position: 10-431
Cow position: chr25:19339251-19338824 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 57

Conread position: 15-431
Cow position: chr25:18273420-18273012 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 51

Conread position: 20-399
Cow position: chr25:17559208-17558820 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 90

Conread position: 27-429
Cow position: chr25:26928646-26929050 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 36

Conread position: 37-431
Cow position: chr25:18888367-18887968 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 21

Conread position: 37-431
Cow position: chr25:20631001-20631400 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 21

Conread position: 82-430
Cow position: chr25:34345577-34345230 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 14

Conread position: 87-430
Cow position: chr25:20346559-20346208 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 9

Conread position: 96-295
Cow position: chr25:30757046-30756844 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 141
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 59, 144

Conread position: 97-277
Cow position: chr25:14957022-14956840 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 139
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 95, 21

Conread position: 106-389
Cow position: chr25:22148985-22149278 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 12

Conread position: 110-430
Cow position: chr25:13062264-13061935 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 277

Conread position: 110-430
Cow position: chr25:27523162-27522851 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 165

Conread position: 110-430
Cow position: chr25:32580968-32581297 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 278

Conread position: 110-431
Cow position: chr25:16924958-16924627 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 241

Conread position: 111-431
Cow position: chr25:11931345-11931008 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 0

Conread position: 111-431
Cow position: chr25:19921991-19922316 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 272

Conread position: 112-298
Cow position: chr25:18192312-18192115 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 148
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 43, 138

Conread position: 112-430
Cow position: chr25:25508154-25508482 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 277

Conread position: 121-424
Cow position: chr25:18486108-18485798 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 248

Conread position: 121-430
Cow position: chr25:13693211-13692893 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 266

Conread position: 194-429
Cow position: chr25:35627905-35627674 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 31

Conread position: 269-430
Cow position: chr25:33664507-33664349 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 122
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 107, 93

Conread position: 286-431
Cow position: chr25:13958435-13958583 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 117
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 90, 0

Conread position: 1-430
Cow position: chr26:20265261-20265686 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 290
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 96, 149

Conread position: 15-431
Cow position: chr26:30588008-30587585 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 15

Conread position: 37-236
Cow position: chr26:9843309-9843103 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 148
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 117, 10

Conread position: 96-415
Cow position: chr26:19350071-19349740 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 309

Conread position: 106-431
Cow position: chr26:17395455-17395129 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 11

Conread position: 110-422
Cow position: chr26:28373772-28373450 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 278

Conread position: 110-430
Cow position: chr26:6805607-6805282 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 228

Conread position: 110-431
Cow position: chr26:4603705-4603378 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 295

Conread position: 112-430
Cow position: chr26:9113340-9113664 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 275

Conread position: 112-430
Cow position: chr26:12587095-12586768 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 275

Conread position: 112-430
Cow position: chr26:14895405-14895731 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 157

Conread position: 112-431
Cow position: chr26:6847984-6847672 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 47

Conread position: 121-349
Cow position: chr26:8911332-8911102 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 176
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 72, 48

Conread position: 121-380
Cow position: chr26:35369404-35369675 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 0

Conread position: 121-431
Cow position: chr26:21825221-21824897 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 200

Conread position: 141-431
Cow position: chr26:21007624-21007930 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 95

Conread position: 151-431
Cow position: chr26:34013161-34013444 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 83

Conread position: 274-431
Cow position: chr26:9560955-9560800 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 126
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 102, 111

Conread position: 283-431
Cow position: chr26:23888031-23888179 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 112
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 19, 96

Conread position: 308-431
Cow position: chr26:13773227-13773106 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 104
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 68, 98

Conread position: 1-270
Cow position: chr27:16552180-16552455 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 182
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 94, 35

Conread position: 1-431
Cow position: chr27:5912232-5912644 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 35

Conread position: 7-431
Cow position: chr27:13898611-13899040 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 49

Conread position: 13-430
Cow position: chr27:15636042-15635615 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 34

Conread position: 15-431
Cow position: chr27:4980675-4981101 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 46

Conread position: 15-431
Cow position: chr27:12748341-12748766 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 15

Conread position: 37-431
Cow position: chr27:26326391-26326790 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 21

Conread position: 42-431
Cow position: chr27:3234193-3233793 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 32

Conread position: 82-431
Cow position: chr27:8199180-8199537 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 14

Conread position: 82-431
Cow position: chr27:19524926-19525275 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 14

Conread position: 85-431
Cow position: chr27:9991834-9991487 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 11

Conread position: 87-426
Cow position: chr27:29056537-29056884 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 9

Conread position: 96-430
Cow position: chr27:798182-797839 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 291

Conread position: 106-431
Cow position: chr27:1210753-1211085 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 13

Conread position: 110-294
Cow position: chr27:23292662-23292848 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 142
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 39, 100

Conread position: 110-333
Cow position: chr27:19260097-19260331 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 182
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 46, 0

Conread position: 110-431
Cow position: chr27:26554026-26553716 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 66

Conread position: 111-431
Cow position: chr27:15274666-15274341 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 209

Conread position: 112-431
Cow position: chr27:1677170-1676844 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 13

Conread position: 121-430
Cow position: chr27:16032993-16032675 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 266

Conread position: 121-430
Cow position: chr27:25803285-25802966 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 282

Conread position: 121-431
Cow position: chr27:27664407-27664724 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 237

Conread position: 122-430
Cow position: chr27:167515-167200 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 263

Conread position: 158-355
Cow position: chr27:16264595-16264392 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 164
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 35, 77

Conread position: 161-431
Cow position: chr27:10327275-10327000 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 238

Conread position: 229-431
Cow position: chr27:15035584-15035380 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 160
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 9, 163

Conread position: 5-431
Cow position: chr28:8719600-8719188 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 42

Conread position: 7-431
Cow position: chr28:17665967-17665554 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 55

Conread position: 9-431
Cow position: chr28:1386060-1385636 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 33

Conread position: 15-430
Cow position: chr28:12151679-12152098 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 22

Conread position: 15-431
Cow position: chr28:784011-784429 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 60

Conread position: 15-431
Cow position: chr28:1166541-1166120 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 60

Conread position: 15-431
Cow position: chr28:1216482-1216064 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 54

Conread position: 15-431
Cow position: chr28:3190904-3190479 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 47

Conread position: 15-431
Cow position: chr28:22259802-22259382 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 22

Conread position: 15-431
Cow position: chr28:33253658-33254076 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 297
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 26, 45

Conread position: 15-431
Cow position: chr28:33637890-33638319 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 43

Conread position: 18-406
Cow position: chr28:5803380-5803767 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 29

Conread position: 19-431
Cow position: chr28:15034763-15034338 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 82

Conread position: 19-431
Cow position: chr28:32791033-32790626 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 16

Conread position: 21-348
Cow position: chr28:18146383-18146054 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 221
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 17, 27

Conread position: 29-431
Cow position: chr28:7741799-7742206 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 8

Conread position: 37-431
Cow position: chr28:2085839-2086238 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 21

Conread position: 37-431
Cow position: chr28:5938862-5939261 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 21

Conread position: 37-431
Cow position: chr28:17389776-17390176 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 21

Conread position: 42-431
Cow position: chr28:34595612-34596005 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 15

Conread position: 82-430
Cow position: chr28:8380453-8380809 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 14

Conread position: 84-431
Cow position: chr28:14194134-14193800 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 239
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 201, 77

Conread position: 87-430
Cow position: chr28:484172-483822 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 9

Conread position: 100-326
Cow position: chr28:9180050-9180279 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 171
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 56, 97

Conread position: 106-387
Cow position: chr28:18100054-18099767 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 207
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 51, 12

Conread position: 106-430
Cow position: chr28:14703944-14703611 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 287

Conread position: 106-431
Cow position: chr28:1813488-1813161 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 12

Conread position: 106-431
Cow position: chr28:5766172-5766504 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 12

Conread position: 110-430
Cow position: chr28:1459538-1459867 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 277

Conread position: 110-430
Cow position: chr28:6537367-6537038 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 277

Conread position: 110-431
Cow position: chr28:5814676-5814978 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 241
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 49, 74

Conread position: 112-343
Cow position: chr28:10471110-10471356 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 185
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 86, 47

Conread position: 112-431
Cow position: chr28:12408780-12408450 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 112-431
Cow position: chr28:29821444-29821761 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 126

Conread position: 120-401
Cow position: chr28:11489422-11489134 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 195
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 36, 125

Conread position: 121-406
Cow position: chr28:21566912-21567190 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 206
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 117, 38

Conread position: 121-427
Cow position: chr28:7003452-7003769 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 237

Conread position: 121-429
Cow position: chr28:13461425-13461739 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 236

Conread position: 121-429
Cow position: chr28:21360951-21361262 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 262

Conread position: 121-430
Cow position: chr28:7827444-7827750 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 94

Conread position: 121-431
Cow position: chr28:5750249-5749930 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 285

Conread position: 121-431
Cow position: chr28:17381417-17381099 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 274

Conread position: 121-431
Cow position: chr28:24590311-24590629 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 228

Conread position: 126-431
Cow position: chr28:24669061-24669370 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 155

Conread position: 134-431
Cow position: chr28:11504766-11504468 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 61

Conread position: 151-431
Cow position: chr28:10645945-10645665 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 66

Conread position: 160-431
Cow position: chr28:23023728-23023992 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 199
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 85, 79

Conread position: 212-430
Cow position: chr28:31591113-31591331 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 168
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 26, 179

Conread position: 225-431
Cow position: chr28:34202086-34201880 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 152
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 25, 14

Conread position: 303-431
Cow position: chr28:3019063-3018934 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 99
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 75, 0

Conread position: 1-431
Cow position: chr29:20252479-20252909 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 99

Conread position: 1-431
Cow position: chr29:25931207-25930781 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 96

Conread position: 1-431
Cow position: chr29:36635066-36634647 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 46

Conread position: 1-431
Cow position: chr29:45205831-45206267 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 67

Conread position: 2-431
Cow position: chr29:19654923-19655355 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 48

Conread position: 6-431
Cow position: chr29:2840039-2839603 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 24

Conread position: 7-372
Cow position: chr29:14112858-14113222 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 50

Conread position: 7-431
Cow position: chr29:39078407-39077974 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 30

Conread position: 15-430
Cow position: chr29:26163522-26163097 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 31

Conread position: 15-431
Cow position: chr29:2691475-2691899 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 46

Conread position: 15-431
Cow position: chr29:6264688-6264262 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 82

Conread position: 15-431
Cow position: chr29:32287559-32287983 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 23

Conread position: 26-431
Cow position: chr29:42803725-42804128 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 10

Conread position: 34-431
Cow position: chr29:5958914-5959312 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 23

Conread position: 37-428
Cow position: chr29:409910-409528 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 21

Conread position: 37-431
Cow position: chr29:5236359-5236761 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 21

Conread position: 37-431
Cow position: chr29:16345552-16345949 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 21

Conread position: 37-431
Cow position: chr29:19621939-19621530 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 21

Conread position: 42-431
Cow position: chr29:2101180-2101575 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 17

Conread position: 43-431
Cow position: chr29:16172750-16172371 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 57

Conread position: 82-431
Cow position: chr29:7429744-7429383 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 19

Conread position: 82-431
Cow position: chr29:9641409-9641048 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 314

Conread position: 82-431
Cow position: chr29:14210168-14209815 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 33

Conread position: 82-431
Cow position: chr29:34798431-34798075 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 14

Conread position: 82-431
Cow position: chr29:45461127-45461483 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 14

Conread position: 85-430
Cow position: chr29:19526903-19526550 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 11

Conread position: 90-431
Cow position: chr29:47069-46724 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 70

Conread position: 110-325
Cow position: chr29:29502852-29502626 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 176
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 46, 0

Conread position: 110-390
Cow position: chr29:19954033-19954321 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 208
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 45, 94

Conread position: 110-430
Cow position: chr29:10022925-10022596 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 277

Conread position: 110-430
Cow position: chr29:21431444-21431116 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 20

Conread position: 110-430
Cow position: chr29:27180346-27180017 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 277

Conread position: 110-430
Cow position: chr29:27979513-27979185 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 176

Conread position: 110-430
Cow position: chr29:38207257-38206928 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 212

Conread position: 110-431
Cow position: chr29:647221-647544 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 206

Conread position: 110-431
Cow position: chr29:5981301-5980979 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 223
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 45, 134

Conread position: 110-431
Cow position: chr29:13851466-13851141 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 249

Conread position: 111-363
Cow position: chr29:27262309-27262041 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 0

Conread position: 112-387
Cow position: chr29:14587328-14587615 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 0

Conread position: 112-431
Cow position: chr29:23977532-23977860 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 281

Conread position: 116-406
Cow position: chr29:2747045-2746748 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 9

Conread position: 117-359
Cow position: chr29:14084714-14084463 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 0

Conread position: 121-271
Cow position: chr29:18855527-18855366 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 123
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 35, 0

Conread position: 121-430
Cow position: chr29:609230-608912 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 267

Conread position: 121-430
Cow position: chr29:31182826-31183138 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 256

Conread position: 121-430
Cow position: chr29:32541515-32541830 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 265

Conread position: 121-431
Cow position: chr29:13018116-13018427 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 124

Conread position: 121-431
Cow position: chr29:13583499-13583818 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 267

Conread position: 121-431
Cow position: chr29:19889005-19889320 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 265

Conread position: 121-431
Cow position: chr29:40501584-40501270 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 14

Conread position: 121-431
Cow position: chr29:43324937-43325253 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 108

Conread position: 122-431
Cow position: chr29:3176019-3175718 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 228
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 39, 53

Conread position: 130-430
Cow position: chr29:801160-800851 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 225
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 27, 85

Conread position: 156-431
Cow position: chr29:27812554-27812820 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 209
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 25, 35

Conread position: 246-431
Cow position: chr29:10645856-10645674 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 144
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 130, 110

Conread position: 1-430
Cow position: chr3:20382263-20382687 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 105

Conread position: 1-430
Cow position: chr3:46017280-46017693 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 303
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 131, 58

Conread position: 2-431
Cow position: chr3:69932621-69932181 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 102

Conread position: 6-431
Cow position: chr3:595356-595779 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 55

Conread position: 9-403
Cow position: chr3:22853283-22852893 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 250
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 17, 128

Conread position: 10-431
Cow position: chr3:40824610-40825045 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 70

Conread position: 15-236
Cow position: chr3:38867545-38867775 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 157
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 69, 61

Conread position: 15-430
Cow position: chr3:7247766-7248184 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 23

Conread position: 15-430
Cow position: chr3:18860645-18861073 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 52

Conread position: 15-430
Cow position: chr3:63241014-63240592 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 12

Conread position: 15-431
Cow position: chr3:30315777-30316200 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 54

Conread position: 15-431
Cow position: chr3:36877424-36877007 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 46

Conread position: 15-431
Cow position: chr3:64016138-64015730 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 302
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 13, 48

Conread position: 21-302
Cow position: chr3:3058047-3058339 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 205
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 39, 78

Conread position: 25-431
Cow position: chr3:21181452-21181045 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 6

Conread position: 37-431
Cow position: chr3:5993826-5993435 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 21

Conread position: 37-431
Cow position: chr3:18812752-18813153 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 21

Conread position: 37-431
Cow position: chr3:72631320-72631709 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 21

Conread position: 44-431
Cow position: chr3:7478656-7478262 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 25

Conread position: 50-403
Cow position: chr3:42448384-42448743 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 7

Conread position: 76-431
Cow position: chr3:67769112-67769460 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 251
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 74, 44

Conread position: 82-380
Cow position: chr3:5884827-5885133 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 14

Conread position: 82-431
Cow position: chr3:48058065-48057708 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 14

Conread position: 82-431
Cow position: chr3:49136269-49135912 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 14

Conread position: 84-431
Cow position: chr3:6687086-6687440 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 164

Conread position: 85-431
Cow position: chr3:34029621-34029267 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 11

Conread position: 92-350
Cow position: chr3:63002254-63001988 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 0

Conread position: 96-360
Cow position: chr3:27919736-27920011 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 0

Conread position: 96-430
Cow position: chr3:19799863-19799527 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 300

Conread position: 99-431
Cow position: chr3:38494553-38494892 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 237
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 56, 166

Conread position: 99-431
Cow position: chr3:47087608-47087930 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 77

Conread position: 100-429
Cow position: chr3:30617607-30617273 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 186

Conread position: 101-431
Cow position: chr3:19755637-19755311 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 17

Conread position: 106-430
Cow position: chr3:56327429-56327759 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 12

Conread position: 106-431
Cow position: chr3:3840196-3839865 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 12

Conread position: 106-431
Cow position: chr3:23206552-23206223 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 11

Conread position: 110-289
Cow position: chr3:48843579-48843769 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 148
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 47, 0

Conread position: 110-374
Cow position: chr3:34090160-34089891 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 188
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 38, 256

Conread position: 110-426
Cow position: chr3:51364463-51364141 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 60

Conread position: 110-430
Cow position: chr3:1742654-1742983 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 277

Conread position: 110-430
Cow position: chr3:2918792-2919116 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 164

Conread position: 110-430
Cow position: chr3:3524338-3524663 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 45

Conread position: 110-430
Cow position: chr3:4287412-4287738 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 137

Conread position: 110-431
Cow position: chr3:27864500-27864825 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 271

Conread position: 110-431
Cow position: chr3:65208506-65208828 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 10

Conread position: 112-347
Cow position: chr3:51938774-51938533 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 112-404
Cow position: chr3:2854121-2853823 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 192

Conread position: 112-422
Cow position: chr3:18462508-18462202 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 47

Conread position: 112-430
Cow position: chr3:16224210-16224537 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 281

Conread position: 112-430
Cow position: chr3:19879969-19880296 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 276

Conread position: 112-430
Cow position: chr3:45034064-45034391 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 277

Conread position: 112-430
Cow position: chr3:64026810-64026486 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 182

Conread position: 112-431
Cow position: chr3:6783692-6784021 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 276

Conread position: 112-431
Cow position: chr3:32621717-32621389 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 161

Conread position: 112-431
Cow position: chr3:44925387-44925715 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 281

Conread position: 112-431
Cow position: chr3:56146628-56146957 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 282

Conread position: 112-431
Cow position: chr3:57483398-57483073 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 278

Conread position: 112-431
Cow position: chr3:66889642-66889315 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 49

Conread position: 116-431
Cow position: chr3:32200350-32200669 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 11

Conread position: 121-427
Cow position: chr3:50916678-50916986 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 230
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 39, 198

Conread position: 121-429
Cow position: chr3:15054367-15054054 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 38

Conread position: 121-431
Cow position: chr3:31416350-31416669 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 266

Conread position: 122-431
Cow position: chr3:37970381-37970699 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 265

Conread position: 124-431
Cow position: chr3:19945581-19945903 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 268

Conread position: 141-350
Cow position: chr3:72671186-72670967 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 173
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 18, 0

Conread position: 151-431
Cow position: chr3:53516976-53517262 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 241

Conread position: 200-431
Cow position: chr3:56338851-56338618 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 195

Conread position: 219-431
Cow position: chr3:19940371-19940582 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 169
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 19, 117

Conread position: 251-431
Cow position: chr3:10242128-10242306 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 144
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 125, 133

Conread position: 257-431
Cow position: chr3:38868068-38868244 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 143
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 119, 0

Conread position: 1-431
Cow position: chr4:16060302-16060735 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 49

Conread position: 2-431
Cow position: chr4:50975650-50976073 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 284
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 54, 67

Conread position: 7-431
Cow position: chr4:16639639-16640066 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 40

Conread position: 7-431
Cow position: chr4:33494578-33495011 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 55

Conread position: 15-431
Cow position: chr4:1049226-1048808 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 61

Conread position: 15-431
Cow position: chr4:10882585-10883005 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 60

Conread position: 15-431
Cow position: chr4:42405644-42406071 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 68

Conread position: 15-431
Cow position: chr4:44780188-44779765 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 32

Conread position: 15-431
Cow position: chr4:57985023-57985447 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 54

Conread position: 15-431
Cow position: chr4:67682228-67682654 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 32

Conread position: 37-403
Cow position: chr4:12588389-12588758 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 21

Conread position: 37-429
Cow position: chr4:25598428-25598032 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 21

Conread position: 37-431
Cow position: chr4:43318577-43318180 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 20

Conread position: 43-428
Cow position: chr4:3356875-3356481 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 55

Conread position: 50-431
Cow position: chr4:13494401-13494788 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 7

Conread position: 82-396
Cow position: chr4:12240121-12239800 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 14

Conread position: 85-430
Cow position: chr4:20236295-20235942 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 11

Conread position: 85-430
Cow position: chr4:38930492-38930839 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 245
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 103, 11

Conread position: 87-430
Cow position: chr4:17502227-17501876 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 9

Conread position: 87-430
Cow position: chr4:41955868-41956218 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 6

Conread position: 88-430
Cow position: chr4:28653388-28653040 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 150

Conread position: 104-387
Cow position: chr4:64216551-64216274 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 6

Conread position: 106-313
Cow position: chr4:69521649-69521858 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 155
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 49, 21

Conread position: 106-390
Cow position: chr4:9847084-9846791 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 10

Conread position: 110-299
Cow position: chr4:45106592-45106792 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 156
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 48, 0

Conread position: 110-324
Cow position: chr4:27300389-27300165 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 170
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 41, 183

Conread position: 110-390
Cow position: chr4:20067597-20067309 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 49

Conread position: 110-399
Cow position: chr4:14755545-14755244 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 0

Conread position: 110-415
Cow position: chr4:604756-605070 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 290

Conread position: 110-430
Cow position: chr4:14386947-14387277 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 278

Conread position: 110-431
Cow position: chr4:28832846-28833170 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 112

Conread position: 112-430
Cow position: chr4:160287-160612 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 267

Conread position: 112-430
Cow position: chr4:5443697-5443370 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 206

Conread position: 112-430
Cow position: chr4:17092734-17092409 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 215

Conread position: 112-430
Cow position: chr4:18423388-18423067 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 117

Conread position: 112-430
Cow position: chr4:41960028-41960354 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 206

Conread position: 112-430
Cow position: chr4:43882238-43882560 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 278

Conread position: 112-431
Cow position: chr4:99090-98757 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 238

Conread position: 121-391
Cow position: chr4:34178102-34177831 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 199

Conread position: 121-403
Cow position: chr4:14819762-14819474 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 212
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 34, 125

Conread position: 121-430
Cow position: chr4:5881296-5881610 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 68

Conread position: 121-430
Cow position: chr4:9355519-9355834 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 263

Conread position: 121-430
Cow position: chr4:30472350-30472668 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 267

Conread position: 121-430
Cow position: chr4:33022499-33022184 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 265

Conread position: 121-430
Cow position: chr4:65665257-65664957 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 229
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 35, 182

Conread position: 121-431
Cow position: chr4:8702706-8703009 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 231
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 72, 25

Conread position: 121-431
Cow position: chr4:26876644-26876332 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 120

Conread position: 121-431
Cow position: chr4:27335068-27335395 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 289

Conread position: 121-431
Cow position: chr4:33071697-33071383 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 159

Conread position: 121-431
Cow position: chr4:44726715-44727034 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 267

Conread position: 122-431
Cow position: chr4:6567517-6567835 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 265

Conread position: 212-430
Cow position: chr4:6267954-6267736 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 167

Conread position: 215-430
Cow position: chr4:20241759-20241975 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 165
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 24, 177

Conread position: 251-431
Cow position: chr4:68837720-68837541 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 147
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 50, 141

Conread position: 261-431
Cow position: chr4:43898254-43898082 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 132
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 115, 0

Conread position: 1-403
Cow position: chr5:26183980-26184391 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 84

Conread position: 10-431
Cow position: chr5:46737460-46737035 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 27

Conread position: 13-253
Cow position: chr5:34697733-34697980 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 176
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 29, 24

Conread position: 15-402
Cow position: chr5:24295752-24296143 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 44

Conread position: 15-430
Cow position: chr5:10855683-10855260 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 61

Conread position: 15-431
Cow position: chr5:2915581-2915993 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 24

Conread position: 15-431
Cow position: chr5:4070355-4070775 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 60

Conread position: 15-431
Cow position: chr5:37733483-37733912 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 47

Conread position: 19-331
Cow position: chr5:49519699-49520009 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 12

Conread position: 19-431
Cow position: chr5:3502967-3502547 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 12

Conread position: 37-263
Cow position: chr5:54791472-54791240 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 166
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 7, 21

Conread position: 37-431
Cow position: chr5:64780855-64780455 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 21

Conread position: 82-429
Cow position: chr5:30580546-30580892 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 14

Conread position: 82-430
Cow position: chr5:57481338-57480981 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 14

Conread position: 82-431
Cow position: chr5:18560204-18559851 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 14

Conread position: 82-431
Cow position: chr5:55629196-55629542 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 14

Conread position: 82-431
Cow position: chr5:76096256-76096610 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 14

Conread position: 84-430
Cow position: chr5:40923442-40923118 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 247
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 110, 12

Conread position: 85-429
Cow position: chr5:31100223-31099879 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 11

Conread position: 85-431
Cow position: chr5:3787133-3787496 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 11

Conread position: 85-431
Cow position: chr5:7275045-7275388 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 11

Conread position: 87-430
Cow position: chr5:10813543-10813192 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 9

Conread position: 87-431
Cow position: chr5:4017990-4017655 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 251
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 72, 6

Conread position: 96-429
Cow position: chr5:48807519-48807174 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 309

Conread position: 96-431
Cow position: chr5:47829862-47829516 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 323

Conread position: 106-430
Cow position: chr5:4756956-4756625 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 11

Conread position: 106-430
Cow position: chr5:59061865-59062194 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 11

Conread position: 110-236
Cow position: chr5:57000554-57000685 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 105
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 49, 30

Conread position: 110-286
Cow position: chr5:23236145-23236331 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 144
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 47, 0

Conread position: 110-349
Cow position: chr5:29767352-29767594 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 178
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 45, 91

Conread position: 110-430
Cow position: chr5:4684575-4684247 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 276

Conread position: 110-430
Cow position: chr5:35301327-35301656 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 277

Conread position: 110-431
Cow position: chr5:18273988-18274306 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 49

Conread position: 110-431
Cow position: chr5:23230217-23230537 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 52

Conread position: 110-431
Cow position: chr5:28242261-28242573 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 225
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 83, 132

Conread position: 110-431
Cow position: chr5:34190145-34190481 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 296

Conread position: 110-431
Cow position: chr5:45701543-45701876 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 25

Conread position: 112-314
Cow position: chr5:27908040-27907827 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 164
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 47, 0

Conread position: 112-365
Cow position: chr5:28014267-28014524 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 198
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 47, 128

Conread position: 112-389
Cow position: chr5:18665006-18665285 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 54

Conread position: 112-398
Cow position: chr5:4386468-4386757 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 219
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 47, 132

Conread position: 112-430
Cow position: chr5:18121251-18120924 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 280

Conread position: 112-430
Cow position: chr5:31707794-31708121 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 275

Conread position: 112-430
Cow position: chr5:32773996-32774323 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 280

Conread position: 112-430
Cow position: chr5:41376623-41376296 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 275

Conread position: 112-431
Cow position: chr5:10842150-10841821 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 291

Conread position: 112-431
Cow position: chr5:10920070-10920394 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 228

Conread position: 118-431
Cow position: chr5:34201702-34201381 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 216
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 39, 8

Conread position: 121-398
Cow position: chr5:41960506-41960228 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 217
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 38, 191

Conread position: 121-430
Cow position: chr5:41527557-41527244 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 251

Conread position: 121-431
Cow position: chr5:23755226-23754926 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 214
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 117, 29

Conread position: 121-431
Cow position: chr5:24099897-24100208 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 107

Conread position: 121-431
Cow position: chr5:49223252-49222931 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 195

Conread position: 121-431
Cow position: chr5:50870858-50871166 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 115

Conread position: 122-390
Cow position: chr5:46808553-46808824 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 54

Conread position: 139-431
Cow position: chr5:2975051-2975349 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 224

Conread position: 140-431
Cow position: chr5:40758185-40758479 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 61

Conread position: 148-428
Cow position: chr5:31122319-31122031 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 238

Conread position: 178-431
Cow position: chr5:58151501-58151246 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 177
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 75, 15

Conread position: 179-428
Cow position: chr5:5666275-5666035 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 174
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 59, 14

Conread position: 192-428
Cow position: chr5:43988421-43988654 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 169
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 14, 163

Conread position: 251-431
Cow position: chr5:12642054-12641874 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 144
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 125, 157

Conread position: 258-431
Cow position: chr5:58191374-58191201 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 141
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 93, 97

Conread position: 307-431
Cow position: chr5:49118901-49118779 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 97
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 65, 0

Conread position: 1-430
Cow position: chr6:17597030-17596600 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 105

Conread position: 6-431
Cow position: chr6:13848341-13848763 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 25

Conread position: 9-431
Cow position: chr6:38272837-38273265 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 38

Conread position: 10-397
Cow position: chr6:43792302-43791903 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 52

Conread position: 13-431
Cow position: chr6:914905-915328 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 60

Conread position: 13-431
Cow position: chr6:25792486-25792061 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 24

Conread position: 15-431
Cow position: chr6:50332-49909 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 58

Conread position: 15-431
Cow position: chr6:1821348-1820932 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 22

Conread position: 15-431
Cow position: chr6:28104586-28104167 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 22

Conread position: 15-431
Cow position: chr6:30273622-30273197 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 60

Conread position: 15-431
Cow position: chr6:39333597-39333173 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 15

Conread position: 15-431
Cow position: chr6:51731356-51731777 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 43

Conread position: 15-431
Cow position: chr6:55541984-55541563 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 22

Conread position: 16-431
Cow position: chr6:16591247-16591653 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 31

Conread position: 19-431
Cow position: chr6:7178015-7177597 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 285
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 23, 8

Conread position: 22-431
Cow position: chr6:10339353-10338949 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 15

Conread position: 37-431
Cow position: chr6:703511-703908 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 21

Conread position: 37-431
Cow position: chr6:15139876-15139477 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 21

Conread position: 37-431
Cow position: chr6:25215515-25215911 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 21

Conread position: 37-431
Cow position: chr6:34890825-34890431 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 21

Conread position: 82-236
Cow position: chr6:3276028-3275868 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 123
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 73, 10

Conread position: 82-430
Cow position: chr6:10250265-10249912 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 14

Conread position: 82-431
Cow position: chr6:21974010-21974366 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 14

Conread position: 82-431
Cow position: chr6:24240747-24241101 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 14

Conread position: 87-427
Cow position: chr6:10679765-10680104 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 72

Conread position: 87-430
Cow position: chr6:2376029-2376370 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 9

Conread position: 87-430
Cow position: chr6:40379286-40378936 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 9

Conread position: 96-403
Cow position: chr6:12627055-12627370 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 210

Conread position: 100-427
Cow position: chr6:27170937-27171273 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 287

Conread position: 106-403
Cow position: chr6:13310014-13309707 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 12

Conread position: 110-342
Cow position: chr6:28134276-28134518 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 185
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 46, 0

Conread position: 110-430
Cow position: chr6:5749291-5749620 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 293

Conread position: 110-430
Cow position: chr6:45587318-45587643 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 137

Conread position: 110-430
Cow position: chr6:47047814-47047485 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 279

Conread position: 110-431
Cow position: chr6:58066098-58066412 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 226
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 128, 58

Conread position: 112-350
Cow position: chr6:13945281-13945528 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 190
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 47, 232

Conread position: 112-430
Cow position: chr6:7139972-7139645 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 275

Conread position: 112-430
Cow position: chr6:28703341-28703014 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 275

Conread position: 112-430
Cow position: chr6:44002042-44002367 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 274

Conread position: 112-430
Cow position: chr6:44149179-44148853 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 129

Conread position: 112-431
Cow position: chr6:184173-183846 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 23

Conread position: 112-431
Cow position: chr6:8759927-8759596 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 0

Conread position: 112-431
Cow position: chr6:58601850-58602176 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 274

Conread position: 116-405
Cow position: chr6:58460945-58460650 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 9

Conread position: 117-430
Cow position: chr6:27528642-27528324 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 156

Conread position: 118-431
Cow position: chr6:52694402-52694722 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 241

Conread position: 120-431
Cow position: chr6:5948405-5948082 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 300

Conread position: 120-431
Cow position: chr6:36528588-36528894 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 81

Conread position: 121-350
Cow position: chr6:16053487-16053727 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 192

Conread position: 121-430
Cow position: chr6:28187442-28187143 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 227
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 36, 182

Conread position: 121-430
Cow position: chr6:35875331-35875015 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 129

Conread position: 121-431
Cow position: chr6:8203566-8203891 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 0

Conread position: 121-431
Cow position: chr6:11723815-11723502 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 38

Conread position: 121-431
Cow position: chr6:39374692-39374995 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 235
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 34, 59

Conread position: 121-431
Cow position: chr6:40553204-40552885 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 240

Conread position: 121-431
Cow position: chr6:40865943-40865630 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 174

Conread position: 121-431
Cow position: chr6:41228823-41229140 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 38

Conread position: 144-431
Cow position: chr6:64717723-64718018 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 257

Conread position: 145-431
Cow position: chr6:69143975-69144265 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 199
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 49, 188

Conread position: 151-387
Cow position: chr6:2577389-2577613 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 170
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 43, 90

Conread position: 151-431
Cow position: chr6:59617507-59617786 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 31

Conread position: 211-431
Cow position: chr6:26777690-26777473 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 175
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 27, 67

Conread position: 213-427
Cow position: chr6:12533282-12533503 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 155
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 37, 26

Conread position: 238-431
Cow position: chr6:17047846-17048037 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 154
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 138, 146

Conread position: 257-430
Cow position: chr6:65897425-65897253 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 140
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 77, 17

Conread position: 1-373
Cow position: chr7:65872258-65871878 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 12

Conread position: 1-431
Cow position: chr7:46747346-46747777 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 99

Conread position: 2-410
Cow position: chr7:25136203-25136620 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 264
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 191, 67

Conread position: 2-415
Cow position: chr7:54581225-54581628 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 41

Conread position: 2-431
Cow position: chr7:5261571-5261135 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 40

Conread position: 2-431
Cow position: chr7:27788316-27788742 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 34

Conread position: 2-431
Cow position: chr7:29471836-29472244 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 44

Conread position: 2-431
Cow position: chr7:49828979-49828549 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 25

Conread position: 6-427
Cow position: chr7:14138241-14137811 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 31

Conread position: 10-422
Cow position: chr7:59138992-59139389 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 291
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 32, 28

Conread position: 11-431
Cow position: chr7:18445395-18444970 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 26

Conread position: 15-427
Cow position: chr7:8143614-8143194 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 22

Conread position: 15-430
Cow position: chr7:7259883-7260304 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 61

Conread position: 15-431
Cow position: chr7:5308749-5308320 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 15

Conread position: 15-431
Cow position: chr7:24807117-24806698 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 47

Conread position: 15-431
Cow position: chr7:25440866-25441285 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 22

Conread position: 15-431
Cow position: chr7:33405028-33404598 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 54

Conread position: 18-390
Cow position: chr7:996113-996487 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 29

Conread position: 18-431
Cow position: chr7:10430057-10429638 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 33

Conread position: 19-431
Cow position: chr7:55536562-55536138 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 29

Conread position: 34-431
Cow position: chr7:13532527-13532121 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 17

Conread position: 37-431
Cow position: chr7:444873-444472 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 21

Conread position: 37-431
Cow position: chr7:39793256-39793643 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 21

Conread position: 40-431
Cow position: chr7:64239599-64239205 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 10

Conread position: 82-431
Cow position: chr7:3126119-3126476 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 14

Conread position: 82-431
Cow position: chr7:21986834-21987190 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 14

Conread position: 85-263
Cow position: chr7:24878449-24878264 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 139
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 74, 11

Conread position: 85-431
Cow position: chr7:1609203-1608850 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 11

Conread position: 90-431
Cow position: chr7:58995011-58995348 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 242
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 163, 69

Conread position: 93-430
Cow position: chr7:33311503-33311162 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 137

Conread position: 96-374
Cow position: chr7:1012059-1011779 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 185
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 96, 121

Conread position: 96-430
Cow position: chr7:6721584-6721926 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 278

Conread position: 105-406
Cow position: chr7:25433835-25434135 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 228
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 74, 13

Conread position: 106-431
Cow position: chr7:39097090-39096756 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 21

Conread position: 110-427
Cow position: chr7:21311908-21312226 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 238
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 49, 169

Conread position: 110-430
Cow position: chr7:20514329-20514002 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 265

Conread position: 110-430
Cow position: chr7:23250077-23250406 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 277

Conread position: 110-430
Cow position: chr7:62445695-62445365 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 281

Conread position: 110-430
Cow position: chr7:66070669-66070344 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 123

Conread position: 110-431
Cow position: chr7:67430026-67430343 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 49

Conread position: 112-321
Cow position: chr7:3299709-3299489 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 171
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 44, 209

Conread position: 112-429
Cow position: chr7:64350952-64351272 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 122

Conread position: 112-430
Cow position: chr7:11462680-11462353 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 276

Conread position: 112-430
Cow position: chr7:48804978-48804650 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 264

Conread position: 112-431
Cow position: chr7:43396955-43396626 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 166

Conread position: 112-431
Cow position: chr7:51015718-51016028 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 91

Conread position: 112-431
Cow position: chr7:52763745-52764072 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 275

Conread position: 112-431
Cow position: chr7:58337580-58337260 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 160

Conread position: 117-429
Cow position: chr7:21126209-21125894 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 42

Conread position: 121-429
Cow position: chr7:67800291-67800609 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 266

Conread position: 121-430
Cow position: chr7:20060955-20061272 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 165

Conread position: 121-431
Cow position: chr7:546311-546623 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 25

Conread position: 121-431
Cow position: chr7:38398287-38398604 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 246

Conread position: 121-431
Cow position: chr7:42871610-42871929 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 282

Conread position: 121-431
Cow position: chr7:45947685-45947365 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 280

Conread position: 122-430
Cow position: chr7:14437-14125 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 172

Conread position: 122-431
Cow position: chr7:20773869-20773557 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 97

Conread position: 122-431
Cow position: chr7:55041017-55040699 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 253

Conread position: 122-431
Cow position: chr7:67490158-67490471 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 211
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 39, 199

Conread position: 131-431
Cow position: chr7:33070932-33070625 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 268

Conread position: 132-431
Cow position: chr7:49730959-49731262 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 251

Conread position: 141-431
Cow position: chr7:42305342-42305071 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 213
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 19, 66

Conread position: 167-431
Cow position: chr7:40320809-40321049 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 202
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 210, 27

Conread position: 168-431
Cow position: chr7:63387249-63387520 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 232

Conread position: 215-431
Cow position: chr7:45952205-45952421 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 155
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 22, 123

Conread position: 239-431
Cow position: chr7:949137-949330 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 162
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 155

Conread position: 251-431
Cow position: chr7:66906853-66907033 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 143
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 125, 142

Conread position: 1-381
Cow position: chr8:23135050-23134675 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 140

Conread position: 1-431
Cow position: chr8:50929559-50929132 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 105

Conread position: 1-431
Cow position: chr8:60061952-60062382 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 105

Conread position: 2-345
Cow position: chr8:17312588-17312943 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 45

Conread position: 7-431
Cow position: chr8:10742107-10741673 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 55

Conread position: 9-431
Cow position: chr8:41644140-41643713 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 26

Conread position: 11-427
Cow position: chr8:56884079-56884496 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 19

Conread position: 13-427
Cow position: chr8:2168972-2168552 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 7

Conread position: 15-380
Cow position: chr8:9736793-9737171 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 265
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 26, 17

Conread position: 15-400
Cow position: chr8:6764737-6764346 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 22

Conread position: 15-430
Cow position: chr8:42485469-42485882 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 22

Conread position: 15-431
Cow position: chr8:14590330-14589904 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 80

Conread position: 15-431
Cow position: chr8:32317994-32317581 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 22

Conread position: 15-431
Cow position: chr8:33589936-33590356 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 15

Conread position: 15-431
Cow position: chr8:35470850-35471275 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 60

Conread position: 15-431
Cow position: chr8:45794203-45793782 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 35

Conread position: 15-431
Cow position: chr8:50995336-50995760 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 60

Conread position: 15-431
Cow position: chr8:59261391-59260975 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 60

Conread position: 19-345
Cow position: chr8:8912031-8912370 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 245
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 8, 32

Conread position: 20-431
Cow position: chr8:50960052-50959640 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 11

Conread position: 23-431
Cow position: chr8:3786189-3786603 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 14

Conread position: 23-431
Cow position: chr8:25523951-25524365 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 101

Conread position: 31-429
Cow position: chr8:12313840-12313432 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 40

Conread position: 37-431
Cow position: chr8:3748626-3748226 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 21

Conread position: 37-431
Cow position: chr8:3855450-3855051 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 21

Conread position: 50-431
Cow position: chr8:47660733-47660348 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 7

Conread position: 82-431
Cow position: chr8:4688018-4688374 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 14

Conread position: 85-303
Cow position: chr8:44920-44695 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 165
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 108, 11

Conread position: 87-393
Cow position: chr8:32041142-32040824 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 9

Conread position: 95-430
Cow position: chr8:51068368-51068025 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 19

Conread position: 96-431
Cow position: chr8:53428116-53428461 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 155

Conread position: 106-431
Cow position: chr8:24914678-24914347 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 12

Conread position: 110-331
Cow position: chr8:9963863-9963644 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 152
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 47, 79

Conread position: 110-336
Cow position: chr8:28878658-28878890 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 137
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 45, 65

Conread position: 110-399
Cow position: chr8:9639519-9639818 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 215
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 45, 134

Conread position: 110-430
Cow position: chr8:34349314-34349643 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 277

Conread position: 110-430
Cow position: chr8:39820095-39820424 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 277

Conread position: 110-431
Cow position: chr8:47674489-47674809 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 25

Conread position: 110-431
Cow position: chr8:47887490-47887817 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 291

Conread position: 111-372
Cow position: chr8:41740398-41740651 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 179
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 127, 28

Conread position: 111-431
Cow position: chr8:38392271-38392599 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 249

Conread position: 112-374
Cow position: chr8:14631018-14630745 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 0

Conread position: 112-430
Cow position: chr8:22570659-22570332 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 275

Conread position: 112-431
Cow position: chr8:1347605-1347277 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 275

Conread position: 112-431
Cow position: chr8:8400467-8400130 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 234
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 43, 182

Conread position: 112-431
Cow position: chr8:39194568-39194239 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 281

Conread position: 115-291
Cow position: chr8:39591607-39591420 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 145
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 44, 0

Conread position: 121-387
Cow position: chr8:47075812-47076085 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 210
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 38, 105

Conread position: 121-390
Cow position: chr8:45691360-45691087 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 205
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 39, 74

Conread position: 121-402
Cow position: chr8:11803472-11803759 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 58

Conread position: 121-430
Cow position: chr8:37932750-37933068 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 266

Conread position: 121-431
Cow position: chr8:9539052-9538741 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 248

Conread position: 121-431
Cow position: chr8:14927230-14926910 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 239

Conread position: 121-431
Cow position: chr8:23772296-23772606 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 167

Conread position: 121-431
Cow position: chr8:30486747-30486438 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 233
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 39, 138

Conread position: 121-431
Cow position: chr8:49218380-49218715 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 312

Conread position: 122-362
Cow position: chr8:21205225-21205467 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 32

Conread position: 122-430
Cow position: chr8:58184939-58184643 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 80

Conread position: 122-431
Cow position: chr8:30155757-30156074 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 264

Conread position: 130-431
Cow position: chr8:44700648-44700954 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 155

Conread position: 151-431
Cow position: chr8:2386876-2387162 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 215

Conread position: 179-431
Cow position: chr8:12542206-12541942 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 196
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 94, 62

Conread position: 213-431
Cow position: chr8:29923596-29923378 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 39

Conread position: 224-431
Cow position: chr8:9944154-9943953 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 172
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 14, 112

Conread position: 240-430
Cow position: chr8:49295265-49295080 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 156
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 68, 0

Conread position: 14-431
Cow position: chr9:6250497-6250910 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 36

Conread position: 15-276
Cow position: chr9:59481596-59481327 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 188
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 39, 22

Conread position: 15-426
Cow position: chr9:4533699-4534115 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 22

Conread position: 15-431
Cow position: chr9:827904-827483 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 76

Conread position: 15-431
Cow position: chr9:21410502-21410931 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 15

Conread position: 15-431
Cow position: chr9:30673580-30674005 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 32

Conread position: 15-431
Cow position: chr9:51180974-51180554 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 15

Conread position: 15-431
Cow position: chr9:54925743-54926161 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 287
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 99, 32

Conread position: 19-281
Cow position: chr9:3005036-3004766 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 185
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 23, 46

Conread position: 19-430
Cow position: chr9:37161609-37161189 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 53

Conread position: 19-431
Cow position: chr9:42310879-42311317 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 47

Conread position: 28-428
Cow position: chr9:20939523-20939932 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 20

Conread position: 37-425
Cow position: chr9:7003957-7004353 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 21

Conread position: 37-429
Cow position: chr9:5005213-5005609 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 21

Conread position: 37-429
Cow position: chr9:17304748-17304352 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 21

Conread position: 37-431
Cow position: chr9:1995159-1994781 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 21

Conread position: 37-431
Cow position: chr9:7060849-7060440 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 292
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 7, 21

Conread position: 37-431
Cow position: chr9:37969981-37969583 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 27

Conread position: 82-360
Cow position: chr9:22654848-22655135 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 14

Conread position: 82-431
Cow position: chr9:9014344-9014696 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 37

Conread position: 82-431
Cow position: chr9:18508554-18508200 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 14

Conread position: 82-431
Cow position: chr9:27036171-27036526 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 14

Conread position: 85-431
Cow position: chr9:13474501-13474144 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 11

Conread position: 87-281
Cow position: chr9:7105155-7104950 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 153
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 69, 0

Conread position: 87-380
Cow position: chr9:28679248-28679543 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 219
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 106, 59

Conread position: 87-430
Cow position: chr9:50093963-50093612 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 9

Conread position: 96-431
Cow position: chr9:2212422-2212765 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 253

Conread position: 97-429
Cow position: chr9:6977612-6977941 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 228
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 95, 64

Conread position: 105-267
Cow position: chr9:47003470-47003641 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 133
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 54, 13

Conread position: 106-429
Cow position: chr9:26567896-26568219 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 12

Conread position: 106-431
Cow position: chr9:12913072-12913408 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 12

Conread position: 106-431
Cow position: chr9:22436261-22436576 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 12

Conread position: 107-333
Cow position: chr9:12113784-12114023 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 169
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 48, 8

Conread position: 110-257
Cow position: chr9:2497675-2497521 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 118
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 49, 0

Conread position: 110-284
Cow position: chr9:26553864-26554038 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 131
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 106, 49

Conread position: 110-430
Cow position: chr9:8781613-8781303 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 233
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 46, 162

Conread position: 110-430
Cow position: chr9:51211979-51212306 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 216

Conread position: 110-430
Cow position: chr9:64015374-64015047 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 275

Conread position: 110-431
Cow position: chr9:9707422-9707744 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 230
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 83, 43

Conread position: 111-431
Cow position: chr9:26083272-26082934 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 298

Conread position: 112-389
Cow position: chr9:44384561-44384850 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 0

Conread position: 112-430
Cow position: chr9:1074878-1074551 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 275

Conread position: 112-430
Cow position: chr9:31066016-31066343 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 275

Conread position: 112-430
Cow position: chr9:47043258-47043585 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 280

Conread position: 112-430
Cow position: chr9:50792011-50792340 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 277

Conread position: 112-431
Cow position: chr9:4942511-4942182 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 276

Conread position: 112-431
Cow position: chr9:38677445-38677770 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 269

Conread position: 121-362
Cow position: chr9:1981570-1981819 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 157

Conread position: 121-364
Cow position: chr9:7158631-7158380 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 194
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 39, 59

Conread position: 121-383
Cow position: chr9:26737220-26737487 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 200
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 34, 45

Conread position: 121-430
Cow position: chr9:1250690-1250373 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 265

Conread position: 121-430
Cow position: chr9:27783494-27783810 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 270

Conread position: 121-430
Cow position: chr9:30828048-30828366 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 285

Conread position: 121-431
Cow position: chr9:4308054-4307739 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 216
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 36, 124

Conread position: 121-431
Cow position: chr9:17063077-17062760 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 266

Conread position: 121-431
Cow position: chr9:19158226-19157903 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 0

Conread position: 121-431
Cow position: chr9:25188408-25188715 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 19

Conread position: 123-431
Cow position: chr9:44819451-44819759 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 174

Conread position: 163-431
Cow position: chr9:28000873-28001150 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 255

Conread position: 243-431
Cow position: chr9:29026483-29026299 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 150
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 134, 87

Conread position: 269-431
Cow position: chr9:17312845-17313003 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 125
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 108, 0

Conread position: 301-431
Cow position: chr9:31090675-31090804 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 108
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 75, 83

Conread position: 302-431
Cow position: chr9:34769642-34769770 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 106
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 74, 88

Conread position: 1-429
Cow position: chrX:12667216-12667647 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 62

Conread position: 2-240
Cow position: chrX:15144792-15144560 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 178
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 32, 72

Conread position: 2-360
Cow position: chrX:15486681-15486333 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 260
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 64, 33

Conread position: 2-429
Cow position: chrX:21341511-21341934 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 73

Conread position: 2-431
Cow position: chrX:321574-321998 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 25

Conread position: 2-431
Cow position: chrX:30068729-30068309 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 42

Conread position: 7-431
Cow position: chrX:21580585-21581018 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 43

Conread position: 8-431
Cow position: chrX:29910323-29909892 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 50

Conread position: 9-431
Cow position: chrX:17666692-17666265 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 26

Conread position: 10-431
Cow position: chrX:2534967-2534550 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 27

Conread position: 15-398
Cow position: chrX:39694756-39695147 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 58

Conread position: 15-430
Cow position: chrX:2577533-2577954 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 32

Conread position: 15-430
Cow position: chrX:15126117-15125698 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 15

Conread position: 15-431
Cow position: chrX:1548088-1548513 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 47

Conread position: 15-431
Cow position: chrX:5296447-5296019 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 22

Conread position: 15-431
Cow position: chrX:6871960-6871543 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 15

Conread position: 15-431
Cow position: chrX:21753323-21752909 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 45

Conread position: 15-431
Cow position: chrX:27316386-27316811 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 32

Conread position: 16-430
Cow position: chrX:2561748-2561324 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 34

Conread position: 19-430
Cow position: chrX:16700807-16701223 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 29

Conread position: 23-431
Cow position: chrX:26757508-26757095 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 14

Conread position: 37-431
Cow position: chrX:23389384-23389003 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 21

Conread position: 37-431
Cow position: chrX:23454884-23454486 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 21

Conread position: 37-431
Cow position: chrX:27495848-27496246 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 27

Conread position: 37-431
Cow position: chrX:30182794-30182395 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 21

Conread position: 43-431
Cow position: chrX:2481489-2481100 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 14

Conread position: 82-389
Cow position: chrX:29097375-29097690 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 14

Conread position: 82-429
Cow position: chrX:27592810-27592459 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 14

Conread position: 82-431
Cow position: chrX:5356648-5356291 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 10

Conread position: 82-431
Cow position: chrX:22489331-22489689 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 335

Conread position: 85-431
Cow position: chrX:15600327-15600678 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 11

Conread position: 85-431
Cow position: chrX:21491343-21491693 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 11

Conread position: 87-430
Cow position: chrX:18452162-18452513 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 9

Conread position: 87-430
Cow position: chrX:37957874-37957523 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 9

Conread position: 87-431
Cow position: chrX:22618028-22617672 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 249
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 36, 171

Conread position: 96-343
Cow position: chrX:20695636-20695383 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 181
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 59, 0

Conread position: 96-427
Cow position: chrX:32327356-32327687 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 196

Conread position: 96-430
Cow position: chrX:41850023-41849692 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 86

Conread position: 96-431
Cow position: chrX:16361931-16361587 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 296

Conread position: 97-431
Cow position: chrX:9093833-9094176 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 320

Conread position: 100-430
Cow position: chrX:9009531-9009868 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 264

Conread position: 106-401
Cow position: chrX:29792830-29792528 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 222
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 10, 106

Conread position: 106-429
Cow position: chrX:18658607-18658277 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 11

Conread position: 106-430
Cow position: chrX:29172559-29172235 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 11

Conread position: 110-322
Cow position: chrX:21059968-21060192 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 174
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 38, 68

Conread position: 110-349
Cow position: chrX:46235949-46236195 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 186
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 49, 241

Conread position: 110-373
Cow position: chrX:21268846-21268581 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 193
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 48, 208

Conread position: 110-385
Cow position: chrX:30138373-30138087 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 0

Conread position: 110-429
Cow position: chrX:2144173-2144500 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 223
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 53, 161

Conread position: 110-430
Cow position: chrX:16684632-16684304 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 276

Conread position: 110-430
Cow position: chrX:20035197-20034869 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 217

Conread position: 110-430
Cow position: chrX:20333358-20333028 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 283

Conread position: 110-430
Cow position: chrX:30436047-30436376 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 277

Conread position: 110-431
Cow position: chrX:3580235-3580566 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 230
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 82, 166

Conread position: 110-431
Cow position: chrX:19875714-19876048 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 237
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 47, 63

Conread position: 110-431
Cow position: chrX:21643699-21643380 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 132

Conread position: 110-431
Cow position: chrX:30365595-30365270 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 238
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 46, 82

Conread position: 110-431
Cow position: chrX:35531058-35531388 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 271

Conread position: 110-431
Cow position: chrX:43072966-43073292 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 226
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 84, 44

Conread position: 110-431
Cow position: chrX:45419035-45418715 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 15

Conread position: 111-422
Cow position: chrX:16848671-16848359 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 213
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 81, 48

Conread position: 112-263
Cow position: chrX:8962367-8962206 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 123
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 46, 0

Conread position: 112-342
Cow position: chrX:30061877-30061653 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 162
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 131, 13

Conread position: 112-375
Cow position: chrX:7031670-7031945 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 203
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 45, 238

Conread position: 112-389
Cow position: chrX:37813357-37813642 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 214
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 45, 121

Conread position: 112-429
Cow position: chrX:27084173-27084504 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 295

Conread position: 112-430
Cow position: chrX:3420006-3419683 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 235
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 47, 243

Conread position: 112-430
Cow position: chrX:5322522-5322196 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 274

Conread position: 112-430
Cow position: chrX:8589368-8589711 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 291

Conread position: 112-430
Cow position: chrX:11463842-11463515 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 275

Conread position: 112-430
Cow position: chrX:13075490-13075171 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 143

Conread position: 112-430
Cow position: chrX:13096053-13095732 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 145

Conread position: 112-430
Cow position: chrX:24771656-24771330 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 262

Conread position: 112-430
Cow position: chrX:28506064-28505737 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 294

Conread position: 112-430
Cow position: chrX:28586186-28586513 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 276

Conread position: 112-430
Cow position: chrX:28757439-28757112 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 275

Conread position: 112-430
Cow position: chrX:37850336-37850663 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 275

Conread position: 112-431
Cow position: chrX:673999-673674 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 69

Conread position: 112-431
Cow position: chrX:971974-972311 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 13

Conread position: 112-431
Cow position: chrX:21224679-21225004 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 279

Conread position: 112-431
Cow position: chrX:30170639-30170319 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 176

Conread position: 115-430
Cow position: chrX:3374701-3374377 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 272

Conread position: 121-403
Cow position: chrX:41102253-41101968 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 199
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 69, 190

Conread position: 121-405
Cow position: chrX:2977878-2977580 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 0

Conread position: 121-426
Cow position: chrX:34219512-34219824 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 160

Conread position: 121-429
Cow position: chrX:27962068-27962361 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 68

Conread position: 121-430
Cow position: chrX:5282566-5282253 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 128

Conread position: 121-430
Cow position: chrX:11423085-11423403 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 266

Conread position: 121-430
Cow position: chrX:13447612-13447294 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 266

Conread position: 121-430
Cow position: chrX:24134057-24133761 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 223
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 48, 74

Conread position: 121-430
Cow position: chrX:24324351-24324033 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 207

Conread position: 121-430
Cow position: chrX:30012213-30012531 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 267

Conread position: 121-430
Cow position: chrX:37015330-37015648 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 266

Conread position: 121-431
Cow position: chrX:4300969-4300655 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 212
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 73, 27

Conread position: 121-431
Cow position: chrX:6241220-6240901 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 266

Conread position: 121-431
Cow position: chrX:16780498-16780815 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 12

Conread position: 121-431
Cow position: chrX:18952463-18952144 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 59

Conread position: 121-431
Cow position: chrX:26529182-26529497 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 36

Conread position: 121-431
Cow position: chrX:38148808-38149124 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 159

Conread position: 121-431
Cow position: chrX:39562739-39562419 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 268

Conread position: 122-389
Cow position: chrX:12314548-12314271 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 111

Conread position: 122-430
Cow position: chrX:12668525-12668215 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 251

Conread position: 123-431
Cow position: chrX:6281565-6281250 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 279

Conread position: 130-431
Cow position: chrX:29886215-29886521 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 94

Conread position: 131-430
Cow position: chrX:18220648-18220953 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 272

Conread position: 135-431
Cow position: chrX:13055057-13055353 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 26

Conread position: 142-430
Cow position: chrX:29096091-29095794 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 262

Conread position: 146-431
Cow position: chrX:22127897-22127604 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 96

Conread position: 151-431
Cow position: chrX:12836071-12835783 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 250

Conread position: 157-431
Cow position: chrX:42477562-42477283 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 243

Conread position: 219-431
Cow position: chrX:21791935-21792147 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 165
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 19, 160

Conread position: 239-428
Cow position: chrX:45376650-45376457 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 154
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 97, 155

Conread position: 298-431
Cow position: chrX:31726522-31726649 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 109
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 78, 94