Cow genome map
| Conread name: | rute2102b_o20.y1 |
| Conread position: | 7-292 |
| Cow position: | chr1:61661461-61661732 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 20, 54 |
| Conread position: | 7-292 |
| Cow position: | chr1:75967278-75966987 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 30 |
| Conread position: | 7-292 |
| Cow position: | chr1:96478538-96478263 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 205 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 10, 31 |
| Conread position: | 20-292 |
| Cow position: | chr1:20002407-20002679 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 204 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 75, 17 |
| Conread position: | 12-292 |
| Cow position: | chr11:35881723-35881455 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 212 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 231, 25 |
| Conread position: | 38-292 |
| Cow position: | chr11:21984244-21983985 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 193 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 59, 209 |
| Conread position: | 15-276 |
| Cow position: | chr14:45068871-45068604 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 194 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 86, 22 |
| Conread position: | 1-292 |
| Cow position: | chr15:50302430-50302721 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 208 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 15, 102 |
| Conread position: | 2-283 |
| Cow position: | chr15:36618427-36618713 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 209 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 22, 36 |
| Conread position: | 4-292 |
| Cow position: | chr15:14856227-14855931 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 220 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 34, 5 |
| Conread position: | 1-110 |
| Cow position: | chr16:30909089-30909197 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 93 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 15, 37 |
| Conread position: | 7-206 |
| Cow position: | chr16:7429213-7429006 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 153 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 9, 32 |
| Conread position: | 7-254 |
| Cow position: | chr18:26937534-26937301 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 178 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 226, 14 |
| Conread position: | 15-292 |
| Cow position: | chr18:52632609-52632883 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 202 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 60, 21 |
| Conread position: | 7-292 |
| Cow position: | chr19:29070881-29071164 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 203 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 7, 52 |
| Conread position: | 15-292 |
| Cow position: | chr2:59592918-59593181 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 206 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 23-279 |
| Cow position: | chr2:70746617-70746365 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 178 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 78, 15 |
| Conread position: | 38-292 |
| Cow position: | chr2:70752598-70752342 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 25, 20 |
| Conread position: | 6-156 |
| Cow position: | chr21:30237199-30237349 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 123 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 23, 35 |
| Conread position: | 25-292 |
| Cow position: | chr21:36909707-36909455 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 1-291 |
| Cow position: | chr22:10294893-10294620 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 41 |
| Conread position: | 7-292 |
| Cow position: | chr22:38313627-38313915 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 55 |
| Conread position: | 15-292 |
| Cow position: | chr22:3283109-3283393 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 206 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 79, 22 |
| Conread position: | 1-292 |
| Cow position: | chr24:40974826-40974541 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 210 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 7, 37 |
| Conread position: | 11-131 |
| Cow position: | chr26:6793790-6793670 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 99 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 5, 28 |
| Conread position: | 12-217 |
| Cow position: | chr27:20869574-20869376 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 24-292 |
| Cow position: | chr27:17472951-17473206 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 23-292 |
| Cow position: | chr28:25070941-25070677 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 195 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 170, 15 |
| Conread position: | 25-292 |
| Cow position: | chr28:22170895-22171154 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 199 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 90, 12 |
| Conread position: | 15-292 |
| Cow position: | chr29:18085416-18085144 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 12-120 |
| Cow position: | chr3:9638786-9638892 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 90 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 6-188 |
| Cow position: | chr4:49629326-49629149 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 9-202 |
| Cow position: | chr4:52167019-52167213 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 84, 49 |
| Conread position: | 23-257 |
| Cow position: | chr4:37787079-37786838 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 183 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 74, 15 |
| Conread position: | 28-292 |
| Cow position: | chr4:68784070-68783813 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 37, 9 |
| Conread position: | 23-292 |
| Cow position: | chr5:24934051-24933784 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 200 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 52, 14 |
| Conread position: | 15-292 |
| Cow position: | chr6:10695734-10695470 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 22 |
| Conread position: | 27-138 |
| Cow position: | chr6:17997460-17997571 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 95 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 48, 9 |
| Conread position: | 3-291 |
| Cow position: | chr7:34716130-34715851 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 37 |
| Conread position: | 15-292 |
| Cow position: | chr7:20780018-20779751 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 202 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 15-292 |
| Cow position: | chr7:42894319-42894024 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 224 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 82, 7 |
| Conread position: | 9-204 |
| Cow position: | chr8:20657494-20657678 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 7, 17 |
| Conread position: | 34-241 |
| Cow position: | chrX:4482799-4482586 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 63, 210 |