Cow genome map
| Conread name: | rute2125b_g12.y1 |
| Conread position: | 79-269 |
| Cow position: | chr1:76757198-76757007 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 44, 29 |
| Conread position: | 71-265 |
| Cow position: | chr10:45371594-45371787 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 149, 118 |
| Conread position: | 71-275 |
| Cow position: | chr10:37815115-37814906 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 90-277 |
| Cow position: | chr10:47058317-47058129 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 98, 129 |
| Conread position: | 66-275 |
| Cow position: | chr11:19438657-19438864 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 149 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 114, 64 |
| Conread position: | 86-266 |
| Cow position: | chr11:80820504-80820684 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 103, 139 |
| Conread position: | 71-279 |
| Cow position: | chr12:27973506-27973306 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 79-273 |
| Cow position: | chr12:30044682-30044870 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 146 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 109, 67 |
| Conread position: | 84-281 |
| Cow position: | chr13:1067946-1068141 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 96, 103 |
| Conread position: | 85-281 |
| Cow position: | chr13:60155027-60155223 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 140 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 102, 97 |
| Conread position: | 92-278 |
| Cow position: | chr13:33200171-33200359 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 98, 63 |
| Conread position: | 71-281 |
| Cow position: | chr16:17877118-17877327 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 36, 60 |
| Conread position: | 79-281 |
| Cow position: | chr16:38625204-38625006 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 101, 120 |
| Conread position: | 71-281 |
| Cow position: | chr17:31802895-31802692 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 150 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 148, 98 |
| Conread position: | 40-204 |
| Cow position: | chr18:45509602-45509761 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 140 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 76-265 |
| Cow position: | chr18:45944517-45944701 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 140 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 63, 142 |
| Conread position: | 42-274 |
| Cow position: | chr2:70519863-70520081 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 168 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 84-281 |
| Cow position: | chr2:9129835-9130027 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 140 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 184, 23 |
| Conread position: | 90-281 |
| Cow position: | chr2:32850202-32850397 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 122, 17 |
| Conread position: | 71-280 |
| Cow position: | chr20:27724394-27724598 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 154 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 64, 82 |
| Conread position: | 95-271 |
| Cow position: | chr20:27664606-27664790 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 136 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 52-281 |
| Cow position: | chr21:1301933-1302160 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 173 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 34, 161 |
| Conread position: | 90-275 |
| Cow position: | chr22:685907-686100 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 98, 51 |
| Conread position: | 42-281 |
| Cow position: | chr24:27952343-27952578 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 64, 40 |
| Conread position: | 66-281 |
| Cow position: | chr24:27088589-27088797 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 122, 42 |
| Conread position: | 66-278 |
| Cow position: | chr25:29948634-29948419 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 146 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 122, 8 |
| Conread position: | 76-281 |
| Cow position: | chr25:21226673-21226464 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 112, 31 |
| Conread position: | 76-281 |
| Cow position: | chr25:21235788-21235579 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 112, 31 |
| Conread position: | 88-275 |
| Cow position: | chr25:14327526-14327343 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 85, 8 |
| Conread position: | 76-281 |
| Cow position: | chr26:21226797-21226999 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 112, 31 |
| Conread position: | 89-281 |
| Cow position: | chr26:21517959-21518149 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 101, 80 |
| Conread position: | 74-279 |
| Cow position: | chr27:16783152-16783355 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 79, 58 |
| Conread position: | 71-275 |
| Cow position: | chr28:13899027-13898825 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 117, 68 |
| Conread position: | 76-266 |
| Cow position: | chr28:5221168-5220980 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 112, 120 |
| Conread position: | 84-281 |
| Cow position: | chr28:3119061-3118868 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 25, 18 |
| Conread position: | 107-275 |
| Cow position: | chr29:41067089-41066919 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 79, 164 |
| Conread position: | 76-277 |
| Cow position: | chr3:79773300-79773100 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 150 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 112, 133 |
| Conread position: | 78-281 |
| Cow position: | chr3:64752354-64752152 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 123, 87 |
| Conread position: | 82-275 |
| Cow position: | chr3:44504997-44505189 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 20, 32 |
| Conread position: | 106-280 |
| Cow position: | chr3:11600024-11599848 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 70, 98 |
| Conread position: | 131-281 |
| Cow position: | chr3:42712918-42713073 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 116 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 57, 145 |
| Conread position: | 66-269 |
| Cow position: | chr4:8176120-8176325 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 71-271 |
| Cow position: | chr5:6750086-6750292 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 143 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 69, 132 |
| Conread position: | 74-281 |
| Cow position: | chr5:43920152-43919934 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 152 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 121-281 |
| Cow position: | chr5:15093095-15092932 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 121 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 67, 56 |
| Conread position: | 71-281 |
| Cow position: | chr7:32570422-32570207 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 156 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 82-281 |
| Cow position: | chr7:11691385-11691583 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 28, 19 |
| Conread position: | 71-271 |
| Cow position: | chr8:55295529-55295340 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 146 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 71-280 |
| Cow position: | chr8:40067687-40067483 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 117, 60 |
| Conread position: | 76-274 |
| Cow position: | chr8:35317011-35316816 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 98, 89 |
| Conread position: | 79-273 |
| Cow position: | chr8:21132065-21132265 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 97, 73 |
| Conread position: | 151-281 |
| Cow position: | chr8:45776159-45776032 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 99 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 83-279 |
| Cow position: | chr9:35124677-35124479 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 105, 18 |
| Conread position: | 109-275 |
| Cow position: | chr9:48066574-48066736 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 123 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 79, 94 |
| Conread position: | 71-281 |
| Cow position: | chrX:868607-868815 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 158 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 120, 33 |