Non-Coding RNA Search

Cow genome map


           Conread name:
           unkn-MI-P-NA-afr-g-11-1-UM.s1
        

               Conread position:
               4-444
               

               Cow position:
               chr1:31365007-31365461 (view UCSC Genome Browser custom track)
               

               Alignm length:
               459
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 17
               

               Conread position:
               5-443
               

               Cow position:
               chr1:40575307-40574840 (view UCSC Genome Browser custom track)
               

               Alignm length:
               470
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 57
               

               Conread position:
               5-444
               

               Cow position:
               chr1:11291020-11291482 (view UCSC Genome Browser custom track)
               

               Alignm length:
               469
               

               Alignm identity:
               307
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               27, 57
               

               Conread position:
               5-444
               

               Cow position:
               chr1:17011642-17012113 (view UCSC Genome Browser custom track)
               

               Alignm length:
               475
               

               Alignm identity:
               282
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               67, 22
               

               Conread position:
               5-444
               

               Cow position:
               chr1:48246931-48246458 (view UCSC Genome Browser custom track)
               

               Alignm length:
               475
               

               Alignm identity:
               322
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               26, 58
               

               Conread position:
               6-447
               

               Cow position:
               chr1:88374716-88375156 (view UCSC Genome Browser custom track)
               

               Alignm length:
               448
               

               Alignm identity:
               278
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               121, 90
               

               Conread position:
               9-426
               

               Cow position:
               chr1:31328412-31328845 (view UCSC Genome Browser custom track)
               

               Alignm length:
               441
               

               Alignm identity:
               286
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               120, 11
               

               Conread position:
               9-449
               

               Cow position:
               chr1:44100310-44100777 (view UCSC Genome Browser custom track)
               

               Alignm length:
               477
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 30
               

               Conread position:
               11-425
               

               Cow position:
               chr1:61310306-61309867 (view UCSC Genome Browser custom track)
               

               Alignm length:
               443
               

               Alignm identity:
               296
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               62, 16
               

               Conread position:
               11-440
               

               Cow position:
               chr1:28711977-28711519 (view UCSC Genome Browser custom track)
               

               Alignm length:
               462
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 19
               

               Conread position:
               11-444
               

               Cow position:
               chr1:44044868-44044408 (view UCSC Genome Browser custom track)
               

               Alignm length:
               464
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 19
               

               Conread position:
               21-444
               

               Cow position:
               chr1:58336914-58336464 (view UCSC Genome Browser custom track)
               

               Alignm length:
               453
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 40
               

               Conread position:
               113-442
               

               Cow position:
               chr1:82912170-82912515 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               232
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               50, 64
               

               Conread position:
               113-444
               

               Cow position:
               chr1:8555296-8554957 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 66
               

               Conread position:
               113-444
               

               Cow position:
               chr1:33896708-33896368 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               237
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               201, 60
               

               Conread position:
               113-444
               

               Cow position:
               chr1:56164516-56164175 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               235
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               204, 0
               

               Conread position:
               113-444
               

               Cow position:
               chr1:57423873-57424215 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               236
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               50, 64
               

               Conread position:
               113-444
               

               Cow position:
               chr1:60340267-60339928 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               239
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               50, 66
               

               Conread position:
               113-444
               

               Cow position:
               chr1:66999978-66999641 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               234
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               50, 25
               

               Conread position:
               113-444
               

               Cow position:
               chr1:71561605-71561947 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               241
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               50, 65
               

               Conread position:
               113-444
               

               Cow position:
               chr1:82653631-82653291 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               229
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               201, 137
               

               Conread position:
               113-444
               

               Cow position:
               chr1:85792646-85792307 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 66
               

               Conread position:
               113-444
               

               Cow position:
               chr1:86547174-86547513 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               201, 0
               

               Conread position:
               113-449
               

               Cow position:
               chr1:29363261-29362917 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               234
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               201, 52
               

               Conread position:
               113-450
               

               Cow position:
               chr1:31397659-31397311 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               241
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               50, 66
               

               Conread position:
               120-434
               

               Cow position:
               chr1:98658947-98659270 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               214
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               132, 128
               

               Conread position:
               122-444
               

               Cow position:
               chr1:33852245-33851911 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               122-447
               

               Cow position:
               chr1:11860291-11860617 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               223
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               114, 53
               

               Conread position:
               127-442
               

               Cow position:
               chr1:18241566-18241884 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               187, 71
               

               Conread position:
               127-444
               

               Cow position:
               chr1:56490804-56490477 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               233
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               36, 50
               

               Conread position:
               127-444
               

               Cow position:
               chr1:59209196-59209525 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               231
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               36, 52
               

               Conread position:
               127-450
               

               Cow position:
               chr1:21088367-21088032 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 52
               

               Conread position:
               130-444
               

               Cow position:
               chr1:31417561-31417888 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               232
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               82, 45
               

               Conread position:
               130-444
               

               Cow position:
               chr1:89426523-89426199 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               227
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               33, 47
               

               Conread position:
               143-444
               

               Cow position:
               chr1:82565439-82565129 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               221
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               171, 35
               

               Conread position:
               145-444
               

               Cow position:
               chr1:13451140-13450830 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               221
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               18, 33
               

               Conread position:
               145-444
               

               Cow position:
               chr1:39544701-39544395 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               215
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               165, 90
               

               Conread position:
               145-444
               

               Cow position:
               chr1:67834204-67834515 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               222
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               18, 34
               

               Conread position:
               145-445
               

               Cow position:
               chr1:57662960-57662650 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               169, 0
               

               Conread position:
               147-444
               

               Cow position:
               chr1:56724090-56723784 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               212
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               16, 127
               

               Conread position:
               169-444
               

               Cow position:
               chr1:80358271-80358555 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               145, 9
               

               Conread position:
               172-444
               

               Cow position:
               chr1:49495316-49495599 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               206
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               142, 0
               

               Conread position:
               187-444
               

               Cow position:
               chr1:95240262-95239994 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               198
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               127, 0
               

               Conread position:
               205-427
               

               Cow position:
               chr1:89481642-89481417 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               163
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               51, 101
               

               Conread position:
               207-444
               

               Cow position:
               chr1:40054228-40053980 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               107, 0
               

               Conread position:
               214-444
               

               Cow position:
               chr1:21356019-21356255 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               167
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               113, 49
               

               Conread position:
               229-444
               

               Cow position:
               chr1:1460363-1460577 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               161
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               85, 34
               

               Conread position:
               239-444
               

               Cow position:
               chr1:20422888-20423104 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               250-444
               

               Cow position:
               chr1:47541456-47541258 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               146
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               64, 116
               

               Conread position:
               3-449
               

               Cow position:
               chr10:39879243-39879714 (view UCSC Genome Browser custom track)
               

               Alignm length:
               475
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 58
               

               Conread position:
               5-424
               

               Cow position:
               chr10:19840796-19840350 (view UCSC Genome Browser custom track)
               

               Alignm length:
               451
               

               Alignm identity:
               304
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               68, 56
               

               Conread position:
               5-444
               

               Cow position:
               chr10:19495165-19495630 (view UCSC Genome Browser custom track)
               

               Alignm length:
               468
               

               Alignm identity:
               313
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               68, 56
               

               Conread position:
               6-444
               

               Cow position:
               chr10:21399555-21400022 (view UCSC Genome Browser custom track)
               

               Alignm length:
               472
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 57
               

               Conread position:
               7-444
               

               Cow position:
               chr10:38544807-38545264 (view UCSC Genome Browser custom track)
               

               Alignm length:
               461
               

               Alignm identity:
               302
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               66, 20
               

               Conread position:
               7-450
               

               Cow position:
               chr10:24976660-24977118 (view UCSC Genome Browser custom track)
               

               Alignm length:
               472
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 21
               

               Conread position:
               8-450
               

               Cow position:
               chr10:21078755-21078279 (view UCSC Genome Browser custom track)
               

               Alignm length:
               486
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 53
               

               Conread position:
               27-363
               

               Cow position:
               chr10:41634708-41634366 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               228
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               101, 143
               

               Conread position:
               111-407
               

               Cow position:
               chr10:9592965-9593268 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               203, 0
               

               Conread position:
               113-444
               

               Cow position:
               chr10:279617-279959 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 65
               

               Conread position:
               113-444
               

               Cow position:
               chr10:11699234-11698892 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               201, 0
               

               Conread position:
               113-444
               

               Cow position:
               chr10:14804825-14804483 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               232
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               201, 0
               

               Conread position:
               113-444
               

               Cow position:
               chr10:21730857-21731198 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               204, 0
               

               Conread position:
               113-444
               

               Cow position:
               chr10:28642524-28642182 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 66
               

               Conread position:
               113-444
               

               Cow position:
               chr10:34286248-34285906 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 64
               

               Conread position:
               113-444
               

               Cow position:
               chr10:41158432-41158096 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               233
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               50, 65
               

               Conread position:
               113-444
               

               Cow position:
               chr10:41877908-41877569 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               238
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               46, 67
               

               Conread position:
               113-444
               

               Cow position:
               chr10:47907921-47907579 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               241
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               50, 65
               

               Conread position:
               113-448
               

               Cow position:
               chr10:39180780-39180434 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               242
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               50, 65
               

               Conread position:
               122-440
               

               Cow position:
               chr10:33348328-33347993 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               241
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               79, 56
               

               Conread position:
               122-444
               

               Cow position:
               chr10:41568081-41567751 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               227
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               192, 0
               

               Conread position:
               127-444
               

               Cow position:
               chr10:55094243-55093915 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               230
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               36, 52
               

               Conread position:
               127-445
               

               Cow position:
               chr10:39815562-39815892 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 50
               

               Conread position:
               130-444
               

               Cow position:
               chr10:21739776-21740103 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               228
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               33, 49
               

               Conread position:
               145-449
               

               Cow position:
               chr10:29631812-29632124 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               222
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               169, 127
               

               Conread position:
               203-444
               

               Cow position:
               chr10:42751968-42751727 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               110, 8
               

               Conread position:
               205-445
               

               Cow position:
               chr10:46196410-46196164 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               25, 33
               

               Conread position:
               220-450
               

               Cow position:
               chr10:64301889-64302120 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               174
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               71, 129
               

               Conread position:
               239-444
               

               Cow position:
               chr10:5848762-5848978 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               239-444
               

               Cow position:
               chr10:49991305-49991090 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               75, 42
               

               Conread position:
               239-444
               

               Cow position:
               chr10:56065538-56065322 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               5-448
               

               Cow position:
               chr11:67451248-67450778 (view UCSC Genome Browser custom track)
               

               Alignm length:
               473
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 57
               

               Conread position:
               7-444
               

               Cow position:
               chr11:36763502-36763037 (view UCSC Genome Browser custom track)
               

               Alignm length:
               469
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 54
               

               Conread position:
               8-317
               

               Cow position:
               chr11:49553426-49553734 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               215
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               128, 23
               

               Conread position:
               10-444
               

               Cow position:
               chr11:28108884-28108437 (view UCSC Genome Browser custom track)
               

               Alignm length:
               455
               

               Alignm identity:
               300
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               58, 20
               

               Conread position:
               10-444
               

               Cow position:
               chr11:40775262-40775709 (view UCSC Genome Browser custom track)
               

               Alignm length:
               453
               

               Alignm identity:
               291
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               58, 51
               

               Conread position:
               11-444
               

               Cow position:
               chr11:64081336-64081796 (view UCSC Genome Browser custom track)
               

               Alignm length:
               464
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 19
               

               Conread position:
               13-440
               

               Cow position:
               chr11:10216594-10217043 (view UCSC Genome Browser custom track)
               

               Alignm length:
               456
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 49
               

               Conread position:
               110-444
               

               Cow position:
               chr11:46245928-46246262 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               236
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               86, 190
               

               Conread position:
               113-444
               

               Cow position:
               chr11:3493623-3493284 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               231
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               50, 66
               

               Conread position:
               113-444
               

               Cow position:
               chr11:15984254-15983912 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 65
               

               Conread position:
               113-444
               

               Cow position:
               chr11:17107057-17107400 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               239
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               50, 65
               

               Conread position:
               113-444
               

               Cow position:
               chr11:17546791-17546454 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               238
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               50, 66
               

               Conread position:
               113-444
               

               Cow position:
               chr11:33193930-33194268 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               233
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               50, 66
               

               Conread position:
               113-444
               

               Cow position:
               chr11:37476372-37476711 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               232
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               50, 66
               

               Conread position:
               113-444
               

               Cow position:
               chr11:63654709-63655050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               236
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               50, 41
               

               Conread position:
               113-444
               

               Cow position:
               chr11:73477937-73477595 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 64
               

               Conread position:
               122-444
               

               Cow position:
               chr11:20733622-20733955 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               232
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               192, 0
               

               Conread position:
               122-444
               

               Cow position:
               chr11:32480558-32480891 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 56
               

               Conread position:
               122-444
               

               Cow position:
               chr11:61400445-61400773 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 57
               

               Conread position:
               127-444
               

               Cow position:
               chr11:36743565-36743894 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               231
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               36, 52
               

               Conread position:
               130-444
               

               Cow position:
               chr11:28229144-28229471 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 49
               

               Conread position:
               147-445
               

               Cow position:
               chr11:9216487-9216793 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               219
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               83, 54
               

               Conread position:
               183-444
               

               Cow position:
               chr11:31874220-31874483 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               131, 211
               

               Conread position:
               202-444
               

               Cow position:
               chr11:44491735-44491985 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               112, 0
               

               Conread position:
               214-442
               

               Cow position:
               chr11:62229710-62229477 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               73, 20
               

               Conread position:
               251-440
               

               Cow position:
               chr11:45112107-45111911 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               49, 55
               

               Conread position:
               5-444
               

               Cow position:
               chr12:25262426-25262893 (view UCSC Genome Browser custom track)
               

               Alignm length:
               469
               

               Alignm identity:
               308
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               63, 56
               

               Conread position:
               8-449
               

               Cow position:
               chr12:21209686-21209227 (view UCSC Genome Browser custom track)
               

               Alignm length:
               464
               

               Alignm identity:
               307
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               23, 54
               

               Conread position:
               15-444
               

               Cow position:
               chr12:36367855-36367410 (view UCSC Genome Browser custom track)
               

               Alignm length:
               449
               

               Alignm identity:
               297
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               53, 12
               

               Conread position:
               21-450
               

               Cow position:
               chr12:17979761-17979305 (view UCSC Genome Browser custom track)
               

               Alignm length:
               463
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 41
               

               Conread position:
               113-444
               

               Cow position:
               chr12:1888598-1888937 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               232
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               50, 65
               

               Conread position:
               113-444
               

               Cow position:
               chr12:14661713-14662056 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               192, 0
               

               Conread position:
               113-444
               

               Cow position:
               chr12:27855049-27855386 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               201, 231
               

               Conread position:
               113-449
               

               Cow position:
               chr12:24557192-24557526 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               239
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               217, 107
               

               Conread position:
               122-444
               

               Cow position:
               chr12:3361833-3361500 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               231
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               41, 57
               

               Conread position:
               122-444
               

               Cow position:
               chr12:21428766-21428433 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               234
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               40, 45
               

               Conread position:
               126-444
               

               Cow position:
               chr12:43030484-43030813 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               231
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               37, 53
               

               Conread position:
               144-444
               

               Cow position:
               chr12:4158262-4157951 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               223
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               19, 33
               

               Conread position:
               144-444
               

               Cow position:
               chr12:8198101-8197790 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               221
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               19, 33
               

               Conread position:
               164-443
               

               Cow position:
               chr12:32654400-32654118 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               201
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               145, 18
               

               Conread position:
               222-449
               

               Cow position:
               chr12:23162512-23162733 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               143, 66
               

               Conread position:
               2-254
               

               Cow position:
               chr13:34049562-34049293 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               71, 59
               

               Conread position:
               2-398
               

               Cow position:
               chr13:5627994-5628402 (view UCSC Genome Browser custom track)
               

               Alignm length:
               416
               

               Alignm identity:
               269
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               77, 17
               

               Conread position:
               4-440
               

               Cow position:
               chr13:43982277-43982724 (view UCSC Genome Browser custom track)
               

               Alignm length:
               454
               

               Alignm identity:
               289
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               69, 27
               

               Conread position:
               4-444
               

               Cow position:
               chr13:6667312-6667760 (view UCSC Genome Browser custom track)
               

               Alignm length:
               458
               

               Alignm identity:
               300
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               64, 16
               

               Conread position:
               4-448
               

               Cow position:
               chr13:32984529-32985000 (view UCSC Genome Browser custom track)
               

               Alignm length:
               474
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 26
               

               Conread position:
               5-444
               

               Cow position:
               chr13:47229181-47229648 (view UCSC Genome Browser custom track)
               

               Alignm length:
               472
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 58
               

               Conread position:
               5-449
               

               Cow position:
               chr13:34324735-34325208 (view UCSC Genome Browser custom track)
               

               Alignm length:
               480
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 58
               

               Conread position:
               7-423
               

               Cow position:
               chr13:31555922-31556350 (view UCSC Genome Browser custom track)
               

               Alignm length:
               433
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 55
               

               Conread position:
               10-444
               

               Cow position:
               chr13:32546195-32545736 (view UCSC Genome Browser custom track)
               

               Alignm length:
               464
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 21
               

               Conread position:
               11-444
               

               Cow position:
               chr13:17309287-17308823 (view UCSC Genome Browser custom track)
               

               Alignm length:
               467
               

               Alignm identity:
               310
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               62, 19
               

               Conread position:
               11-444
               

               Cow position:
               chr13:30304099-30303638 (view UCSC Genome Browser custom track)
               

               Alignm length:
               463
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 49
               

               Conread position:
               13-443
               

               Cow position:
               chr13:46102142-46101694 (view UCSC Genome Browser custom track)
               

               Alignm length:
               454
               

               Alignm identity:
               284
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               54, 13
               

               Conread position:
               20-443
               

               Cow position:
               chr13:20541239-20541679 (view UCSC Genome Browser custom track)
               

               Alignm length:
               448
               

               Alignm identity:
               285
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               107, 198
               

               Conread position:
               110-410
               

               Cow position:
               chr13:25692384-25692087 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               209
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               100, 106
               

               Conread position:
               113-444
               

               Cow position:
               chr13:2388118-2388458 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               236
               

               Alignm E-value:
               8.96831e-44
               

               Alignm gaps (pig, cow):
               50, 66
               

               Conread position:
               113-444
               

               Cow position:
               chr13:21839503-21839845 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               236
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               201, 0
               

               Conread position:
               113-444
               

               Cow position:
               chr13:30243984-30244325 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 66
               

               Conread position:
               113-444
               

               Cow position:
               chr13:49974373-49974037 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               223
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               232, 198
               

               Conread position:
               113-444
               

               Cow position:
               chr13:58118213-58118555 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               201, 0
               

               Conread position:
               113-444
               

               Cow position:
               chr13:60467023-60466686 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               238
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               50, 64
               

               Conread position:
               128-444
               

               Cow position:
               chr13:30238919-30238604 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               223
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               181, 79
               

               Conread position:
               145-440
               

               Cow position:
               chr13:42218260-42218556 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               208
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               18, 34
               

               Conread position:
               178-444
               

               Cow position:
               chr13:31733455-31733732 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               202
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               136, 158
               

               Conread position:
               239-444
               

               Cow position:
               chr13:41316428-41316212 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               243-444
               

               Cow position:
               chr13:12063384-12063596 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               1-443
               

               Cow position:
               chr14:13620452-13620916 (view UCSC Genome Browser custom track)
               

               Alignm length:
               470
               

               Alignm identity:
               304
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               115, 20
               

               Conread position:
               1-450
               

               Cow position:
               chr14:38815020-38815477 (view UCSC Genome Browser custom track)
               

               Alignm length:
               462
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 60
               

               Conread position:
               3-421
               

               Cow position:
               chr14:48601643-48602072 (view UCSC Genome Browser custom track)
               

               Alignm length:
               432
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 58
               

               Conread position:
               3-425
               

               Cow position:
               chr14:44676816-44676372 (view UCSC Genome Browser custom track)
               

               Alignm length:
               448
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 61
               

               Conread position:
               4-444
               

               Cow position:
               chr14:35385377-35385839 (view UCSC Genome Browser custom track)
               

               Alignm length:
               466
               

               Alignm identity:
               308
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               125, 23
               

               Conread position:
               4-444
               

               Cow position:
               chr14:44582050-44581587 (view UCSC Genome Browser custom track)
               

               Alignm length:
               467
               

               Alignm identity:
               310
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               64, 56
               

               Conread position:
               4-449
               

               Cow position:
               chr14:30705630-30706061 (view UCSC Genome Browser custom track)
               

               Alignm length:
               466
               

               Alignm identity:
               325
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               64, 57
               

               Conread position:
               5-444
               

               Cow position:
               chr14:12742373-12742836 (view UCSC Genome Browser custom track)
               

               Alignm length:
               468
               

               Alignm identity:
               315
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               63, 22
               

               Conread position:
               5-444
               

               Cow position:
               chr14:15275538-15275999 (view UCSC Genome Browser custom track)
               

               Alignm length:
               465
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 26
               

               Conread position:
               5-444
               

               Cow position:
               chr14:17686094-17685632 (view UCSC Genome Browser custom track)
               

               Alignm length:
               467
               

               Alignm identity:
               313
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               63, 26
               

               Conread position:
               6-214
               

               Cow position:
               chr14:13322985-13323191 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               67, 20
               

               Conread position:
               6-444
               

               Cow position:
               chr14:16919023-16919485 (view UCSC Genome Browser custom track)
               

               Alignm length:
               468
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 25
               

               Conread position:
               8-351
               

               Cow position:
               chr14:33489099-33488745 (view UCSC Genome Browser custom track)
               

               Alignm length:
               363
               

               Alignm identity:
               258
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               65, 53
               

               Conread position:
               11-444
               

               Cow position:
               chr14:45671358-45671818 (view UCSC Genome Browser custom track)
               

               Alignm length:
               464
               

               Alignm identity:
               315
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               62, 19
               

               Conread position:
               113-444
               

               Cow position:
               chr14:751137-750811 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               231
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               50, 66
               

               Conread position:
               113-444
               

               Cow position:
               chr14:2284909-2284567 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               239
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               50, 66
               

               Conread position:
               113-444
               

               Cow position:
               chr14:16272725-16273067 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               201, 0
               

               Conread position:
               113-444
               

               Cow position:
               chr14:17490888-17491227 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               201, 0
               

               Conread position:
               113-444
               

               Cow position:
               chr14:23257924-23257588 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               236
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               50, 41
               

               Conread position:
               113-444
               

               Cow position:
               chr14:27977932-27977588 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               238
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               50, 66
               

               Conread position:
               113-444
               

               Cow position:
               chr14:30584385-30584724 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               235
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               50, 64
               

               Conread position:
               113-444
               

               Cow position:
               chr14:45161662-45161333 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               229
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               201, 60
               

               Conread position:
               113-444
               

               Cow position:
               chr14:48253740-48254070 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               200, 162
               

               Conread position:
               113-444
               

               Cow position:
               chr14:48825854-48825524 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               222
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               16, 103
               

               Conread position:
               121-444
               

               Cow position:
               chr14:16343586-16343920 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               232
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               195, 0
               

               Conread position:
               122-444
               

               Cow position:
               chr14:29047124-29047456 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               230
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               41, 56
               

               Conread position:
               122-444
               

               Cow position:
               chr14:44286689-44287014 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               218
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               194, 242
               

               Conread position:
               122-444
               

               Cow position:
               chr14:44288593-44288918 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               218
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               194, 242
               

               Conread position:
               127-444
               

               Cow position:
               chr14:9046132-9045796 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               238
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               36, 52
               

               Conread position:
               145-442
               

               Cow position:
               chr14:35917064-35917372 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               222
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               18, 35
               

               Conread position:
               167-444
               

               Cow position:
               chr14:23901805-23901518 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               211
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               147, 9
               

               Conread position:
               317-444
               

               Cow position:
               chr14:30380719-30380852 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               104
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               2-444
               

               Cow position:
               chr15:10889314-10888849 (view UCSC Genome Browser custom track)
               

               Alignm length:
               469
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 59
               

               Conread position:
               3-449
               

               Cow position:
               chr15:20356221-20356689 (view UCSC Genome Browser custom track)
               

               Alignm length:
               476
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 57
               

               Conread position:
               4-364
               

               Cow position:
               chr15:14636269-14635878 (view UCSC Genome Browser custom track)
               

               Alignm length:
               393
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 276
               

               Conread position:
               6-430
               

               Cow position:
               chr15:4927075-4926647 (view UCSC Genome Browser custom track)
               

               Alignm length:
               436
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 55
               

               Conread position:
               6-444
               

               Cow position:
               chr15:31359576-31359118 (view UCSC Genome Browser custom track)
               

               Alignm length:
               463
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 57
               

               Conread position:
               6-449
               

               Cow position:
               chr15:9003426-9003894 (view UCSC Genome Browser custom track)
               

               Alignm length:
               471
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               134, 97
               

               Conread position:
               7-442
               

               Cow position:
               chr15:2763358-2762912 (view UCSC Genome Browser custom track)
               

               Alignm length:
               462
               

               Alignm identity:
               306
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               24, 162
               

               Conread position:
               11-444
               

               Cow position:
               chr15:4197153-4196693 (view UCSC Genome Browser custom track)
               

               Alignm length:
               464
               

               Alignm identity:
               313
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               62, 19
               

               Conread position:
               11-444
               

               Cow position:
               chr15:20750081-20749621 (view UCSC Genome Browser custom track)
               

               Alignm length:
               464
               

               Alignm identity:
               314
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               62, 19
               

               Conread position:
               12-450
               

               Cow position:
               chr15:14581671-14582131 (view UCSC Genome Browser custom track)
               

               Alignm length:
               466
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 15
               

               Conread position:
               14-404
               

               Cow position:
               chr15:6478835-6478441 (view UCSC Genome Browser custom track)
               

               Alignm length:
               405
               

               Alignm identity:
               265
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               108, 7
               

               Conread position:
               110-444
               

               Cow position:
               chr15:4672010-4671669 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               233
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               199, 251
               

               Conread position:
               112-449
               

               Cow position:
               chr15:3009279-3009627 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               241
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               51, 63
               

               Conread position:
               113-444
               

               Cow position:
               chr15:445178-444836 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               235
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               50, 66
               

               Conread position:
               113-444
               

               Cow position:
               chr15:1518581-1518919 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               235
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               50, 66
               

               Conread position:
               113-444
               

               Cow position:
               chr15:2647082-2647426 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               236
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               50, 66
               

               Conread position:
               113-444
               

               Cow position:
               chr15:4142245-4142587 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               238
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               50, 66
               

               Conread position:
               113-444
               

               Cow position:
               chr15:11597434-11597776 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               238
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               50, 66
               

               Conread position:
               113-444
               

               Cow position:
               chr15:18267414-18267756 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               233
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               48, 64
               

               Conread position:
               113-444
               

               Cow position:
               chr15:50123370-50123711 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               236
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               50, 66
               

               Conread position:
               113-445
               

               Cow position:
               chr15:17079637-17079973 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               234
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               201, 51
               

               Conread position:
               115-444
               

               Cow position:
               chr15:50147637-50147298 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               236
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               199, 68
               

               Conread position:
               120-444
               

               Cow position:
               chr15:1773064-1772729 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               234
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               39, 136
               

               Conread position:
               122-416
               

               Cow position:
               chr15:8750966-8750678 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               200
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               41, 55
               

               Conread position:
               122-444
               

               Cow position:
               chr15:28489584-28489917 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               231
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               192, 0
               

               Conread position:
               122-444
               

               Cow position:
               chr15:37393056-37392726 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               242
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               16, 23
               

               Conread position:
               127-444
               

               Cow position:
               chr15:1782782-1782454 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               232
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               36, 52
               

               Conread position:
               144-444
               

               Cow position:
               chr15:36971459-36971148 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               222
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               19, 33
               

               Conread position:
               147-445
               

               Cow position:
               chr15:24717626-24717319 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               214
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               160, 61
               

               Conread position:
               148-444
               

               Cow position:
               chr15:31862024-31862322 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               162, 246
               

               Conread position:
               166-449
               

               Cow position:
               chr15:30811492-30811217 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               142, 11
               

               Conread position:
               176-419
               

               Cow position:
               chr15:328921-328679 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               186, 124
               

               Conread position:
               187-427
               

               Cow position:
               chr15:32711592-32711341 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               127, 0
               

               Conread position:
               187-447
               

               Cow position:
               chr15:2012548-2012280 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               198
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               122, 0
               

               Conread position:
               196-444
               

               Cow position:
               chr15:1882015-1882275 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               185
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               15, 24
               

               Conread position:
               202-450
               

               Cow position:
               chr15:6067691-6067948 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               195
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               108, 24
               

               Conread position:
               219-444
               

               Cow position:
               chr15:38981137-38980901 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               166
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               238-449
               

               Cow position:
               chr15:6623533-6623318 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               67, 13
               

               Conread position:
               239-444
               

               Cow position:
               chr15:789125-789341 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               239-444
               

               Cow position:
               chr15:21466318-21466102 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               1-127
               

               Cow position:
               chr16:41570639-41570512 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               99
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               37, 62
               

               Conread position:
               4-444
               

               Cow position:
               chr16:31591560-31592024 (view UCSC Genome Browser custom track)
               

               Alignm length:
               471
               

               Alignm identity:
               318
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               28, 60
               

               Conread position:
               5-444
               

               Cow position:
               chr16:10375246-10375710 (view UCSC Genome Browser custom track)
               

               Alignm length:
               469
               

               Alignm identity:
               312
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               68, 22
               

               Conread position:
               6-445
               

               Cow position:
               chr16:29089941-29090396 (view UCSC Genome Browser custom track)
               

               Alignm length:
               461
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 55
               

               Conread position:
               10-450
               

               Cow position:
               chr16:25171700-25171233 (view UCSC Genome Browser custom track)
               

               Alignm length:
               471
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 52
               

               Conread position:
               11-444
               

               Cow position:
               chr16:5662192-5661732 (view UCSC Genome Browser custom track)
               

               Alignm length:
               463
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 51
               

               Conread position:
               25-450
               

               Cow position:
               chr16:28437056-28437503 (view UCSC Genome Browser custom track)
               

               Alignm length:
               457
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 36
               

               Conread position:
               113-444
               

               Cow position:
               chr16:1432415-1432079 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 54
               

               Conread position:
               113-444
               

               Cow position:
               chr16:11283540-11283198 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               240
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               50, 66
               

               Conread position:
               113-444
               

               Cow position:
               chr16:28170141-28170483 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 65
               

               Conread position:
               113-444
               

               Cow position:
               chr16:28197447-28197789 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 66
               

               Conread position:
               113-449
               

               Cow position:
               chr16:21185844-21185498 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               238
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               50, 66
               

               Conread position:
               113-450
               

               Cow position:
               chr16:41162842-41163186 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               240
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               50, 75
               

               Conread position:
               122-444
               

               Cow position:
               chr16:28377439-28377106 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               235
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               41, 57
               

               Conread position:
               122-449
               

               Cow position:
               chr16:17057039-17057371 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               149, 94
               

               Conread position:
               130-444
               

               Cow position:
               chr16:29034261-29033942 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               184, 45
               

               Conread position:
               146-444
               

               Cow position:
               chr16:4302143-4302451 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               220
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               17, 33
               

               Conread position:
               178-448
               

               Cow position:
               chr16:43851962-43852235 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               17, 62
               

               Conread position:
               202-444
               

               Cow position:
               chr16:26374730-26374480 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               179
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               89, 46
               

               Conread position:
               2-444
               

               Cow position:
               chr17:20403349-20402887 (view UCSC Genome Browser custom track)
               

               Alignm length:
               468
               

               Alignm identity:
               310
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               31, 59
               

               Conread position:
               5-444
               

               Cow position:
               chr17:2263035-2262564 (view UCSC Genome Browser custom track)
               

               Alignm length:
               473
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 59
               

               Conread position:
               5-444
               

               Cow position:
               chr17:22133125-22132697 (view UCSC Genome Browser custom track)
               

               Alignm length:
               451
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 29
               

               Conread position:
               5-449
               

               Cow position:
               chr17:34157044-34156583 (view UCSC Genome Browser custom track)
               

               Alignm length:
               475
               

               Alignm identity:
               323
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               68, 22
               

               Conread position:
               6-444
               

               Cow position:
               chr17:6069481-6069017 (view UCSC Genome Browser custom track)
               

               Alignm length:
               466
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 56
               

               Conread position:
               7-449
               

               Cow position:
               chr17:20080948-20081402 (view UCSC Genome Browser custom track)
               

               Alignm length:
               463
               

               Alignm identity:
               307
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               116, 21
               

               Conread position:
               8-449
               

               Cow position:
               chr17:6000536-6000989 (view UCSC Genome Browser custom track)
               

               Alignm length:
               459
               

               Alignm identity:
               304
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               25, 168
               

               Conread position:
               11-444
               

               Cow position:
               chr17:15436712-15436252 (view UCSC Genome Browser custom track)
               

               Alignm length:
               464
               

               Alignm identity:
               310
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               62, 16
               

               Conread position:
               13-444
               

               Cow position:
               chr17:31767123-31767578 (view UCSC Genome Browser custom track)
               

               Alignm length:
               459
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 17
               

               Conread position:
               22-448
               

               Cow position:
               chr17:227403-227852 (view UCSC Genome Browser custom track)
               

               Alignm length:
               454
               

               Alignm identity:
               300
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               107, 39
               

               Conread position:
               113-439
               

               Cow position:
               chr17:2247267-2247603 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               231
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               50, 66
               

               Conread position:
               113-444
               

               Cow position:
               chr17:8209910-8209568 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               238
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               50, 66
               

               Conread position:
               113-444
               

               Cow position:
               chr17:14216233-14216572 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               234
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               201, 63
               

               Conread position:
               113-444
               

               Cow position:
               chr17:18102888-18103227 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               239
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               201, 60
               

               Conread position:
               113-444
               

               Cow position:
               chr17:43989300-43988961 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               233
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               83, 151
               

               Conread position:
               122-429
               

               Cow position:
               chr17:3655502-3655819 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               222
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               41, 11
               

               Conread position:
               122-449
               

               Cow position:
               chr17:182092-181755 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               240
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               41, 56
               

               Conread position:
               127-444
               

               Cow position:
               chr17:6120500-6120172 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               229
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               36, 52
               

               Conread position:
               130-444
               

               Cow position:
               chr17:23323668-23323993 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               226
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               33, 48
               

               Conread position:
               145-444
               

               Cow position:
               chr17:11783613-11783308 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               215
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               18, 34
               

               Conread position:
               223-444
               

               Cow position:
               chr17:18299703-18299933 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               76, 120
               

               Conread position:
               237-444
               

               Cow position:
               chr17:1382140-1382358 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               265-444
               

               Cow position:
               chr17:9080789-9080979 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               5-441
               

               Cow position:
               chr18:54022997-54023463 (view UCSC Genome Browser custom track)
               

               Alignm length:
               469
               

               Alignm identity:
               316
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               28, 57
               

               Conread position:
               5-444
               

               Cow position:
               chr18:16089271-16088816 (view UCSC Genome Browser custom track)
               

               Alignm length:
               464
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 26
               

               Conread position:
               5-444
               

               Cow position:
               chr18:19353495-19353040 (view UCSC Genome Browser custom track)
               

               Alignm length:
               461
               

               Alignm identity:
               295
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               68, 56
               

               Conread position:
               5-444
               

               Cow position:
               chr18:51342821-51342355 (view UCSC Genome Browser custom track)
               

               Alignm length:
               470
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 56
               

               Conread position:
               7-444
               

               Cow position:
               chr18:52652044-52651586 (view UCSC Genome Browser custom track)
               

               Alignm length:
               461
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 20
               

               Conread position:
               11-444
               

               Cow position:
               chr18:14417114-14416654 (view UCSC Genome Browser custom track)
               

               Alignm length:
               462
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 20
               

               Conread position:
               11-444
               

               Cow position:
               chr18:51661470-51661014 (view UCSC Genome Browser custom track)
               

               Alignm length:
               463
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 19
               

               Conread position:
               35-359
               

               Cow position:
               chr18:36255800-36256138 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               222
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               33, 26
               

               Conread position:
               113-444
               

               Cow position:
               chr18:16079678-16079340 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               236
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               50, 66
               

               Conread position:
               113-444
               

               Cow position:
               chr18:33952570-33952908 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 64
               

               Conread position:
               113-444
               

               Cow position:
               chr18:51462078-51462411 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               232
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               50, 66
               

               Conread position:
               127-440
               

               Cow position:
               chr18:54271492-54271178 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               219
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               187, 18
               

               Conread position:
               127-444
               

               Cow position:
               chr18:11274109-11274437 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 52
               

               Conread position:
               145-444
               

               Cow position:
               chr18:55087942-55088251 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               216
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               169, 33
               

               Conread position:
               151-441
               

               Cow position:
               chr18:40725688-40725984 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 14
               

               Conread position:
               187-443
               

               Cow position:
               chr18:24039788-24040055 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               196
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               127, 0
               

               Conread position:
               3-444
               

               Cow position:
               chr19:28405565-28406033 (view UCSC Genome Browser custom track)
               

               Alignm length:
               474
               

               Alignm identity:
               317
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               65, 58
               

               Conread position:
               5-444
               

               Cow position:
               chr19:773739-773268 (view UCSC Genome Browser custom track)
               

               Alignm length:
               474
               

               Alignm identity:
               323
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               26, 57
               

               Conread position:
               5-444
               

               Cow position:
               chr19:40851311-40851760 (view UCSC Genome Browser custom track)
               

               Alignm length:
               462
               

               Alignm identity:
               301
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               68, 26
               

               Conread position:
               12-444
               

               Cow position:
               chr19:3139064-3138615 (view UCSC Genome Browser custom track)
               

               Alignm length:
               459
               

               Alignm identity:
               305
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               15, 182
               

               Conread position:
               13-444
               

               Cow position:
               chr19:342353-341895 (view UCSC Genome Browser custom track)
               

               Alignm length:
               460
               

               Alignm identity:
               305
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               24, 50
               

               Conread position:
               104-450
               

               Cow position:
               chr19:5900479-5900828 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               238
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               59, 10
               

               Conread position:
               113-426
               

               Cow position:
               chr19:32194029-32193705 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               227
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               50, 64
               

               Conread position:
               113-429
               

               Cow position:
               chr19:39313-38984 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               221
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               57, 66
               

               Conread position:
               113-444
               

               Cow position:
               chr19:438423-438762 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               239
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               58, 68
               

               Conread position:
               113-444
               

               Cow position:
               chr19:7343082-7342740 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               236
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               197, 0
               

               Conread position:
               113-444
               

               Cow position:
               chr19:32211060-32211400 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               230
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               50, 64
               

               Conread position:
               122-444
               

               Cow position:
               chr19:52150828-52151157 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               227
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               41, 16
               

               Conread position:
               122-444
               

               Cow position:
               chr19:53844599-53844262 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               234
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               179, 150
               

               Conread position:
               122-450
               

               Cow position:
               chr19:32182074-32182417 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               192, 55
               

               Conread position:
               147-444
               

               Cow position:
               chr19:43144692-43144386 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               206
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               167-410
               

               Cow position:
               chr19:39002097-39002348 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               147, 0
               

               Conread position:
               173-444
               

               Cow position:
               chr19:28566968-28567250 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               204
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               141, 0
               

               Conread position:
               176-428
               

               Cow position:
               chr19:40816617-40816878 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               191
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               129, 70
               

               Conread position:
               193-450
               

               Cow position:
               chr19:167665-167934 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               121, 0
               

               Conread position:
               194-442
               

               Cow position:
               chr19:20105646-20105388 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               185
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               12, 172
               

               Conread position:
               202-449
               

               Cow position:
               chr19:35384822-35385081 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               194
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               115, 55
               

               Conread position:
               1-423
               

               Cow position:
               chr2:766917-767325 (view UCSC Genome Browser custom track)
               

               Alignm length:
               428
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 129
               

               Conread position:
               2-444
               

               Cow position:
               chr2:15576264-15576718 (view UCSC Genome Browser custom track)
               

               Alignm length:
               463
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               127, 29
               

               Conread position:
               4-448
               

               Cow position:
               chr2:5484419-5484867 (view UCSC Genome Browser custom track)
               

               Alignm length:
               463
               

               Alignm identity:
               302
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               70, 23
               

               Conread position:
               5-444
               

               Cow position:
               chr2:41657758-41657290 (view UCSC Genome Browser custom track)
               

               Alignm length:
               472
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 57
               

               Conread position:
               5-445
               

               Cow position:
               chr2:1691557-1691087 (view UCSC Genome Browser custom track)
               

               Alignm length:
               474
               

               Alignm identity:
               315
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               68, 26
               

               Conread position:
               5-447
               

               Cow position:
               chr2:52617055-52616581 (view UCSC Genome Browser custom track)
               

               Alignm length:
               478
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 58
               

               Conread position:
               6-448
               

               Cow position:
               chr2:4926837-4927282 (view UCSC Genome Browser custom track)
               

               Alignm length:
               460
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               125, 44
               

               Conread position:
               6-449
               

               Cow position:
               chr2:29030712-29030259 (view UCSC Genome Browser custom track)
               

               Alignm length:
               470
               

               Alignm identity:
               324
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               126, 15
               

               Conread position:
               7-445
               

               Cow position:
               chr2:2087595-2088059 (view UCSC Genome Browser custom track)
               

               Alignm length:
               468
               

               Alignm identity:
               306
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               66, 23
               

               Conread position:
               11-449
               

               Cow position:
               chr2:36992790-36992357 (view UCSC Genome Browser custom track)
               

               Alignm length:
               452
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               159, 85
               

               Conread position:
               113-425
               

               Cow position:
               chr2:39422079-39421755 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               223
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               50, 65
               

               Conread position:
               113-442
               

               Cow position:
               chr2:57335653-57335313 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               201, 0
               

               Conread position:
               113-444
               

               Cow position:
               chr2:364602-364944 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               237
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               50, 66
               

               Conread position:
               113-444
               

               Cow position:
               chr2:2412340-2412681 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               232
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               201, 0
               

               Conread position:
               113-444
               

               Cow position:
               chr2:9908370-9908028 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               237
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               28, 67
               

               Conread position:
               113-444
               

               Cow position:
               chr2:41686965-41686624 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               239
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               50, 66
               

               Conread position:
               113-444
               

               Cow position:
               chr2:49472705-49472362 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               113-444
               

               Cow position:
               chr2:59413228-59413566 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               231
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               201, 179
               

               Conread position:
               122-384
               

               Cow position:
               chr2:387293-387571 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               52, 26
               

               Conread position:
               122-444
               

               Cow position:
               chr2:12223865-12224187 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               227
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               231, 36
               

               Conread position:
               122-447
               

               Cow position:
               chr2:49605390-49605062 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               234
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               13, 24
               

               Conread position:
               127-444
               

               Cow position:
               chr2:3324118-3324445 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               229
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               187, 51
               

               Conread position:
               127-444
               

               Cow position:
               chr2:47037979-47038299 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               227
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               36, 52
               

               Conread position:
               150-447
               

               Cow position:
               chr2:34051587-34051282 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               209
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               20, 29
               

               Conread position:
               166-449
               

               Cow position:
               chr2:45919168-45919454 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 11
               

               Conread position:
               168-444
               

               Cow position:
               chr2:10611241-10611516 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               146, 8
               

               Conread position:
               169-444
               

               Cow position:
               chr2:80955239-80955521 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               145, 9
               

               Conread position:
               176-450
               

               Cow position:
               chr2:76025151-76024881 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               206
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               136, 86
               

               Conread position:
               195-447
               

               Cow position:
               chr2:16281671-16281421 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               171
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               131, 48
               

               Conread position:
               197-444
               

               Cow position:
               chr2:54485350-54485608 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               186
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               117, 0
               

               Conread position:
               199-449
               

               Cow position:
               chr2:11692912-11692657 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               115, 53
               

               Conread position:
               204-444
               

               Cow position:
               chr2:2381470-2381222 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               110, 0
               

               Conread position:
               204-444
               

               Cow position:
               chr2:51989889-51990134 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               110, 190
               

               Conread position:
               219-444
               

               Cow position:
               chr2:42332517-42332749 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               171
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               95, 19
               

               Conread position:
               239-444
               

               Cow position:
               chr2:49590732-49590516 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               250-444
               

               Cow position:
               chr2:39622930-39622728 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               147
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               64, 40
               

               Conread position:
               272-444
               

               Cow position:
               chr2:5474814-5474631 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               134
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               1-447
               

               Cow position:
               chr20:823863-823391 (view UCSC Genome Browser custom track)
               

               Alignm length:
               476
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 61
               

               Conread position:
               5-444
               

               Cow position:
               chr20:5536031-5535572 (view UCSC Genome Browser custom track)
               

               Alignm length:
               464
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 26
               

               Conread position:
               6-440
               

               Cow position:
               chr20:18314248-18314700 (view UCSC Genome Browser custom track)
               

               Alignm length:
               460
               

               Alignm identity:
               312
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               17, 58
               

               Conread position:
               7-444
               

               Cow position:
               chr20:14869859-14870315 (view UCSC Genome Browser custom track)
               

               Alignm length:
               461
               

               Alignm identity:
               299
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               66, 24
               

               Conread position:
               9-445
               

               Cow position:
               chr20:13433509-13433957 (view UCSC Genome Browser custom track)
               

               Alignm length:
               457
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 52
               

               Conread position:
               113-444
               

               Cow position:
               chr20:8973844-8974182 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               227
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               50, 66
               

               Conread position:
               113-444
               

               Cow position:
               chr20:13679074-13679406 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               217
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               169, 45
               

               Conread position:
               113-444
               

               Cow position:
               chr20:27870178-27869837 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               236
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               201, 0
               

               Conread position:
               113-444
               

               Cow position:
               chr20:30685293-30684958 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               229
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               201, 184
               

               Conread position:
               113-444
               

               Cow position:
               chr20:38351648-38351306 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               240
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               50, 66
               

               Conread position:
               122-449
               

               Cow position:
               chr20:18324223-18324556 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 20
               

               Conread position:
               193-444
               

               Cow position:
               chr20:25961989-25961733 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               188
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               139, 121
               

               Conread position:
               4-427
               

               Cow position:
               chr21:218241-217818 (view UCSC Genome Browser custom track)
               

               Alignm length:
               436
               

               Alignm identity:
               289
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               233, 15
               

               Conread position:
               4-448
               

               Cow position:
               chr21:18817337-18817817 (view UCSC Genome Browser custom track)
               

               Alignm length:
               482
               

               Alignm identity:
               321
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               69, 57
               

               Conread position:
               6-444
               

               Cow position:
               chr21:39088212-39087754 (view UCSC Genome Browser custom track)
               

               Alignm length:
               463
               

               Alignm identity:
               288
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               67, 24
               

               Conread position:
               11-444
               

               Cow position:
               chr21:37046827-37046369 (view UCSC Genome Browser custom track)
               

               Alignm length:
               462
               

               Alignm identity:
               310
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               62, 19
               

               Conread position:
               110-446
               

               Cow position:
               chr21:20743488-20743829 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               226
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               83, 139
               

               Conread position:
               113-444
               

               Cow position:
               chr21:5015220-5015549 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               229
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               196, 119
               

               Conread position:
               113-444
               

               Cow position:
               chr21:11452568-11452909 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 66
               

               Conread position:
               113-444
               

               Cow position:
               chr21:11506685-11506344 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               230
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               50, 64
               

               Conread position:
               113-444
               

               Cow position:
               chr21:12054915-12055252 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 66
               

               Conread position:
               113-444
               

               Cow position:
               chr21:26637109-26637449 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               230
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               50, 285
               

               Conread position:
               113-444
               

               Cow position:
               chr21:37372326-37371994 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               231
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               201, 162
               

               Conread position:
               113-444
               

               Cow position:
               chr21:39426148-39425810 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               234
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               201, 73
               

               Conread position:
               113-444
               

               Cow position:
               chr21:46916764-46916422 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               236
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               50, 66
               

               Conread position:
               117-444
               

               Cow position:
               chr21:27149997-27149661 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               122-440
               

               Cow position:
               chr21:23603622-23603291 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 55
               

               Conread position:
               127-444
               

               Cow position:
               chr21:28256508-28256177 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               231
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               36, 50
               

               Conread position:
               147-443
               

               Cow position:
               chr21:21943709-21944014 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               212
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               25, 31
               

               Conread position:
               187-448
               

               Cow position:
               chr21:4094519-4094247 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               201
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               127, 21
               

               Conread position:
               219-444
               

               Cow position:
               chr21:2711473-2711244 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               12, 24
               

               Conread position:
               225-449
               

               Cow position:
               chr21:6622568-6622334 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               167
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               25, 133
               

               Conread position:
               1-444
               

               Cow position:
               chr22:538146-537675 (view UCSC Genome Browser custom track)
               

               Alignm length:
               475
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 60
               

               Conread position:
               1-444
               

               Cow position:
               chr22:44458100-44457631 (view UCSC Genome Browser custom track)
               

               Alignm length:
               472
               

               Alignm identity:
               316
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               32, 61
               

               Conread position:
               4-441
               

               Cow position:
               chr22:1323247-1322798 (view UCSC Genome Browser custom track)
               

               Alignm length:
               461
               

               Alignm identity:
               308
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               70, 25
               

               Conread position:
               5-444
               

               Cow position:
               chr22:3277319-3277780 (view UCSC Genome Browser custom track)
               

               Alignm length:
               466
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 22
               

               Conread position:
               5-444
               

               Cow position:
               chr22:5232251-5232705 (view UCSC Genome Browser custom track)
               

               Alignm length:
               459
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 22
               

               Conread position:
               6-448
               

               Cow position:
               chr22:11032788-11032324 (view UCSC Genome Browser custom track)
               

               Alignm length:
               472
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 55
               

               Conread position:
               8-128
               

               Cow position:
               chr22:36590246-36590366 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               95
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               60, 53
               

               Conread position:
               9-449
               

               Cow position:
               chr22:41240407-41239946 (view UCSC Genome Browser custom track)
               

               Alignm length:
               469
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 20
               

               Conread position:
               10-377
               

               Cow position:
               chr22:290666-291051 (view UCSC Genome Browser custom track)
               

               Alignm length:
               396
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 52
               

               Conread position:
               11-444
               

               Cow position:
               chr22:14630452-14629993 (view UCSC Genome Browser custom track)
               

               Alignm length:
               464
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 15
               

               Conread position:
               11-444
               

               Cow position:
               chr22:20239807-20240268 (view UCSC Genome Browser custom track)
               

               Alignm length:
               465
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 19
               

               Conread position:
               12-444
               

               Cow position:
               chr22:18028315-18027856 (view UCSC Genome Browser custom track)
               

               Alignm length:
               463
               

               Alignm identity:
               313
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               61, 15
               

               Conread position:
               113-443
               

               Cow position:
               chr22:1879710-1879369 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               236
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               50, 65
               

               Conread position:
               113-443
               

               Cow position:
               chr22:37268077-37267738 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               230
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               201, 0
               

               Conread position:
               113-444
               

               Cow position:
               chr22:694537-694200 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               201, 63
               

               Conread position:
               113-444
               

               Cow position:
               chr22:10908920-10909259 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 65
               

               Conread position:
               113-444
               

               Cow position:
               chr22:11804139-11804482 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 67
               

               Conread position:
               113-444
               

               Cow position:
               chr22:27284943-27284607 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               230
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               50, 66
               

               Conread position:
               113-444
               

               Cow position:
               chr22:27308859-27309201 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               243
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               34, 26
               

               Conread position:
               113-444
               

               Cow position:
               chr22:35671438-35671780 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               235
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               50, 64
               

               Conread position:
               113-444
               

               Cow position:
               chr22:36184674-36184332 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               235
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               201, 0
               

               Conread position:
               113-447
               

               Cow position:
               chr22:326253-326596 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               234
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               201, 122
               

               Conread position:
               122-444
               

               Cow position:
               chr22:6021570-6021237 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               231
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               41, 57
               

               Conread position:
               122-444
               

               Cow position:
               chr22:24951005-24950672 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               229
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               41, 55
               

               Conread position:
               145-444
               

               Cow position:
               chr22:44491918-44491609 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               224
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               18, 33
               

               Conread position:
               167-444
               

               Cow position:
               chr22:44368763-44369051 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               205
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               17, 193
               

               Conread position:
               181-449
               

               Cow position:
               chr22:5940461-5940721 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               193
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               151, 51
               

               Conread position:
               205-442
               

               Cow position:
               chr22:9287410-9287165 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               109, 0
               

               Conread position:
               1-449
               

               Cow position:
               chr23:19490581-19490113 (view UCSC Genome Browser custom track)
               

               Alignm length:
               473
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 60
               

               Conread position:
               2-444
               

               Cow position:
               chr23:27971574-27971116 (view UCSC Genome Browser custom track)
               

               Alignm length:
               464
               

               Alignm identity:
               306
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               66, 60
               

               Conread position:
               3-283
               

               Cow position:
               chr23:6220289-6219999 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 60
               

               Conread position:
               4-444
               

               Cow position:
               chr23:28025701-28025245 (view UCSC Genome Browser custom track)
               

               Alignm length:
               461
               

               Alignm identity:
               302
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               64, 46
               

               Conread position:
               6-360
               

               Cow position:
               chr23:15876529-15876907 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               256
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               62, 14
               

               Conread position:
               11-444
               

               Cow position:
               chr23:27400544-27400082 (view UCSC Genome Browser custom track)
               

               Alignm length:
               464
               

               Alignm identity:
               309
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               22, 50
               

               Conread position:
               13-380
               

               Cow position:
               chr23:7045412-7045763 (view UCSC Genome Browser custom track)
               

               Alignm length:
               372
               

               Alignm identity:
               239
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               60, 6
               

               Conread position:
               21-444
               

               Cow position:
               chr23:28367507-28367944 (view UCSC Genome Browser custom track)
               

               Alignm length:
               445
               

               Alignm identity:
               298
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               47, 40
               

               Conread position:
               21-450
               

               Cow position:
               chr23:11077183-11077642 (view UCSC Genome Browser custom track)
               

               Alignm length:
               464
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 40
               

               Conread position:
               27-449
               

               Cow position:
               chr23:13510663-13510232 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 32
               

               Conread position:
               37-448
               

               Cow position:
               chr23:618456-618876 (view UCSC Genome Browser custom track)
               

               Alignm length:
               432
               

               Alignm identity:
               277
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               36, 23
               

               Conread position:
               113-444
               

               Cow position:
               chr23:4360724-4360384 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 41
               

               Conread position:
               113-449
               

               Cow position:
               chr23:2312325-2312670 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               201, 0
               

               Conread position:
               127-446
               

               Cow position:
               chr23:19949697-19950021 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               230
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               187, 167
               

               Conread position:
               167-444
               

               Cow position:
               chr23:23830824-23830536 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               206
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               147, 0
               

               Conread position:
               239-429
               

               Cow position:
               chr23:4651473-4651272 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               146
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               75, 161
               

               Conread position:
               239-444
               

               Cow position:
               chr23:10157978-10157762 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               239-444
               

               Cow position:
               chr23:31447607-31447391 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               157
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               2-444
               

               Cow position:
               chr24:14389410-14389872 (view UCSC Genome Browser custom track)
               

               Alignm length:
               469
               

               Alignm identity:
               299
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               71, 59
               

               Conread position:
               5-444
               

               Cow position:
               chr24:4414405-4414871 (view UCSC Genome Browser custom track)
               

               Alignm length:
               468
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 56
               

               Conread position:
               5-444
               

               Cow position:
               chr24:6435608-6435139 (view UCSC Genome Browser custom track)
               

               Alignm length:
               474
               

               Alignm identity:
               322
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               68, 56
               

               Conread position:
               5-450
               

               Cow position:
               chr24:6085187-6084723 (view UCSC Genome Browser custom track)
               

               Alignm length:
               468
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 22
               

               Conread position:
               6-444
               

               Cow position:
               chr24:19702609-19702146 (view UCSC Genome Browser custom track)
               

               Alignm length:
               469
               

               Alignm identity:
               314
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               67, 55
               

               Conread position:
               6-444
               

               Cow position:
               chr24:22972217-22971755 (view UCSC Genome Browser custom track)
               

               Alignm length:
               466
               

               Alignm identity:
               308
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               14, 26
               

               Conread position:
               6-444
               

               Cow position:
               chr24:33934497-33934035 (view UCSC Genome Browser custom track)
               

               Alignm length:
               471
               

               Alignm identity:
               322
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               62, 23
               

               Conread position:
               11-444
               

               Cow position:
               chr24:44018638-44018195 (view UCSC Genome Browser custom track)
               

               Alignm length:
               448
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 19
               

               Conread position:
               113-444
               

               Cow position:
               chr24:9187730-9188073 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               241
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               46, 67
               

               Conread position:
               113-444
               

               Cow position:
               chr24:12484315-12484656 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 66
               

               Conread position:
               113-444
               

               Cow position:
               chr24:12699814-12700156 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               231
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               201, 0
               

               Conread position:
               113-444
               

               Cow position:
               chr24:23504862-23505204 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               240
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               50, 64
               

               Conread position:
               113-444
               

               Cow position:
               chr24:43814766-43814425 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               235
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               50, 66
               

               Conread position:
               122-449
               

               Cow position:
               chr24:5992234-5992570 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 56
               

               Conread position:
               127-444
               

               Cow position:
               chr24:19834380-19834054 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               230
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               172, 310
               

               Conread position:
               130-443
               

               Cow position:
               chr24:6064739-6065061 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               221
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               134, 69
               

               Conread position:
               131-444
               

               Cow position:
               chr24:28210095-28210421 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 317
               

               Conread position:
               143-444
               

               Cow position:
               chr24:29305348-29305660 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 36
               

               Conread position:
               145-444
               

               Cow position:
               chr24:8031261-8030951 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               221
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               169, 0
               

               Conread position:
               178-444
               

               Cow position:
               chr24:6646639-6646362 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               200
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               136, 0
               

               Conread position:
               193-444
               

               Cow position:
               chr24:6024181-6024443 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               121, 0
               

               Conread position:
               196-449
               

               Cow position:
               chr24:6538874-6538614 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               191
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               118, 105
               

               Conread position:
               208-444
               

               Cow position:
               chr24:21960043-21960290 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               182
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               106, 0
               

               Conread position:
               239-444
               

               Cow position:
               chr24:44326233-44326017 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               310-444
               

               Cow position:
               chr24:11866673-11866812 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               106
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               110-429
               

               Cow position:
               chr25:12758122-12758455 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               218
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               204, 317
               

               Conread position:
               113-444
               

               Cow position:
               chr25:17588593-17588935 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               243
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               50, 65
               

               Conread position:
               113-444
               

               Cow position:
               chr25:20630593-20630254 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               196, 0
               

               Conread position:
               113-444
               

               Cow position:
               chr25:27021621-27021951 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               231
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               50, 66
               

               Conread position:
               122-442
               

               Cow position:
               chr25:17559597-17559927 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               230
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               192, 0
               

               Conread position:
               126-449
               

               Cow position:
               chr25:40918226-40918541 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               224, 49
               

               Conread position:
               145-444
               

               Cow position:
               chr25:32580887-32580582 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               216
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               18, 250
               

               Conread position:
               213-444
               

               Cow position:
               chr25:13550169-13550412 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               171
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               222-449
               

               Cow position:
               chr25:33258487-33258258 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               43, 48
               

               Conread position:
               226-444
               

               Cow position:
               chr25:18304243-18304024 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               87, 9
               

               Conread position:
               239-444
               

               Cow position:
               chr25:6172737-6172521 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               5-444
               

               Cow position:
               chr26:6848338-6848801 (view UCSC Genome Browser custom track)
               

               Alignm length:
               468
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 26
               

               Conread position:
               11-444
               

               Cow position:
               chr26:3029748-3030189 (view UCSC Genome Browser custom track)
               

               Alignm length:
               447
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 19
               

               Conread position:
               11-444
               

               Cow position:
               chr26:15143662-15144121 (view UCSC Genome Browser custom track)
               

               Alignm length:
               464
               

               Alignm identity:
               314
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               62, 16
               

               Conread position:
               113-444
               

               Cow position:
               chr26:2199607-2199265 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               234
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               50, 66
               

               Conread position:
               113-444
               

               Cow position:
               chr26:8870856-8870515 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 66
               

               Conread position:
               113-444
               

               Cow position:
               chr26:12587585-12587926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               234
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               50, 66
               

               Conread position:
               113-444
               

               Cow position:
               chr26:30783730-30783382 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               239
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               126-444
               

               Cow position:
               chr26:2351395-2351723 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               233
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               37, 53
               

               Conread position:
               5-444
               

               Cow position:
               chr27:1210397-1209932 (view UCSC Genome Browser custom track)
               

               Alignm length:
               470
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 26
               

               Conread position:
               8-450
               

               Cow position:
               chr27:27507188-27506711 (view UCSC Genome Browser custom track)
               

               Alignm length:
               483
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 52
               

               Conread position:
               10-448
               

               Cow position:
               chr27:21286855-21287296 (view UCSC Genome Browser custom track)
               

               Alignm length:
               452
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 99
               

               Conread position:
               11-429
               

               Cow position:
               chr27:30273167-30273613 (view UCSC Genome Browser custom track)
               

               Alignm length:
               450
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 20
               

               Conread position:
               11-432
               

               Cow position:
               chr27:27195596-27196026 (view UCSC Genome Browser custom track)
               

               Alignm length:
               441
               

               Alignm identity:
               287
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               22, 51
               

               Conread position:
               111-442
               

               Cow position:
               chr27:22673262-22672917 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               225
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               126, 120
               

               Conread position:
               113-444
               

               Cow position:
               chr27:11095722-11095383 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               240
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               50, 66
               

               Conread position:
               113-444
               

               Cow position:
               chr27:15542247-15541905 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 67
               

               Conread position:
               113-444
               

               Cow position:
               chr27:16033474-16033818 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 65
               

               Conread position:
               177-450
               

               Cow position:
               chr27:6014630-6014353 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               149, 140
               

               Conread position:
               205-448
               

               Cow position:
               chr27:894040-893785 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               187
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               109, 0
               

               Conread position:
               219-447
               

               Cow position:
               chr27:25804105-25804336 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               95, 181
               

               Conread position:
               2-445
               

               Cow position:
               chr28:15035024-15035473 (view UCSC Genome Browser custom track)
               

               Alignm length:
               455
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 136
               

               Conread position:
               5-444
               

               Cow position:
               chr28:1505954-1505492 (view UCSC Genome Browser custom track)
               

               Alignm length:
               467
               

               Alignm identity:
               310
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               103, 22
               

               Conread position:
               5-444
               

               Cow position:
               chr28:7003083-7002618 (view UCSC Genome Browser custom track)
               

               Alignm length:
               467
               

               Alignm identity:
               309
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               111, 26
               

               Conread position:
               8-444
               

               Cow position:
               chr28:24668697-24668245 (view UCSC Genome Browser custom track)
               

               Alignm length:
               457
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 53
               

               Conread position:
               21-449
               

               Cow position:
               chr28:13461047-13460588 (view UCSC Genome Browser custom track)
               

               Alignm length:
               461
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 41
               

               Conread position:
               113-410
               

               Cow position:
               chr28:33253267-33252962 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               214
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               125, 121
               

               Conread position:
               113-444
               

               Cow position:
               chr28:2723960-2724302 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               234
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               50, 64
               

               Conread position:
               113-444
               

               Cow position:
               chr28:6779375-6779717 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               227
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               50, 66
               

               Conread position:
               113-444
               

               Cow position:
               chr28:14751507-14751166 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 66
               

               Conread position:
               113-444
               

               Cow position:
               chr28:22232458-22232779 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               232
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               46, 41
               

               Conread position:
               113-444
               

               Cow position:
               chr28:24589815-24589474 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               237
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               50, 66
               

               Conread position:
               122-441
               

               Cow position:
               chr28:5567109-5566779 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               192, 0
               

               Conread position:
               124-444
               

               Cow position:
               chr28:6538311-6538641 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               232
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               39, 55
               

               Conread position:
               219-450
               

               Cow position:
               chr28:2988379-2988623 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               19, 14
               

               Conread position:
               287-444
               

               Cow position:
               chr28:1953920-1953752 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               11-444
               

               Cow position:
               chr29:609579-610030 (view UCSC Genome Browser custom track)
               

               Alignm length:
               459
               

               Alignm identity:
               309
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               38, 19
               

               Conread position:
               11-444
               

               Cow position:
               chr29:18855904-18856358 (view UCSC Genome Browser custom track)
               

               Alignm length:
               459
               

               Alignm identity:
               303
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               62, 19
               

               Conread position:
               11-446
               

               Cow position:
               chr29:35814929-35815393 (view UCSC Genome Browser custom track)
               

               Alignm length:
               469
               

               Alignm identity:
               320
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               57, 19
               

               Conread position:
               112-429
               

               Cow position:
               chr29:16111307-16110980 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               222
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               51, 66
               

               Conread position:
               113-315
               

               Cow position:
               chr29:19622355-19622555 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               142, 0
               

               Conread position:
               113-444
               

               Cow position:
               chr29:669130-669472 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               234
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               50, 66
               

               Conread position:
               113-444
               

               Cow position:
               chr29:15893921-15894264 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               238
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               50, 67
               

               Conread position:
               113-444
               

               Cow position:
               chr29:15967933-15968275 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               240
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               50, 66
               

               Conread position:
               113-444
               

               Cow position:
               chr29:32558825-32559169 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               113-444
               

               Cow position:
               chr29:34926406-34926064 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 33
               

               Conread position:
               122-448
               

               Cow position:
               chr29:4633483-4633810 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               225
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               70, 104
               

               Conread position:
               127-444
               

               Cow position:
               chr29:19885981-19885653 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               227
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               36, 52
               

               Conread position:
               132-444
               

               Cow position:
               chr29:16023448-16023125 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               223
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               182, 0
               

               Conread position:
               143-444
               

               Cow position:
               chr29:27249445-27249757 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 36
               

               Conread position:
               146-444
               

               Cow position:
               chr29:31182299-31181990 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               217
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               17, 31
               

               Conread position:
               177-412
               

               Cow position:
               chr29:8061635-8061865 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               178
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               137, 52
               

               Conread position:
               201-442
               

               Cow position:
               chr29:38654807-38655059 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               183
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               113, 0
               

               Conread position:
               239-444
               

               Cow position:
               chr29:15785157-15785374 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               153
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               1-444
               

               Cow position:
               chr3:46860329-46860799 (view UCSC Genome Browser custom track)
               

               Alignm length:
               472
               

               Alignm identity:
               314
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               72, 63
               

               Conread position:
               3-444
               

               Cow position:
               chr3:46680398-46679934 (view UCSC Genome Browser custom track)
               

               Alignm length:
               467
               

               Alignm identity:
               302
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               70, 58
               

               Conread position:
               3-446
               

               Cow position:
               chr3:32622070-32622543 (view UCSC Genome Browser custom track)
               

               Alignm length:
               476
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 59
               

               Conread position:
               5-359
               

               Cow position:
               chr3:63270350-63269988 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               237
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               68, 26
               

               Conread position:
               5-444
               

               Cow position:
               chr3:42448074-42447609 (view UCSC Genome Browser custom track)
               

               Alignm length:
               469
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 56
               

               Conread position:
               5-444
               

               Cow position:
               chr3:56339449-56339918 (view UCSC Genome Browser custom track)
               

               Alignm length:
               473
               

               Alignm identity:
               315
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               27, 57
               

               Conread position:
               5-449
               

               Cow position:
               chr3:20381510-20381039 (view UCSC Genome Browser custom track)
               

               Alignm length:
               475
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 22
               

               Conread position:
               10-444
               

               Cow position:
               chr3:19755985-19756447 (view UCSC Genome Browser custom track)
               

               Alignm length:
               463
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 0
               

               Conread position:
               11-443
               

               Cow position:
               chr3:27919384-27918939 (view UCSC Genome Browser custom track)
               

               Alignm length:
               457
               

               Alignm identity:
               306
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               62, 19
               

               Conread position:
               11-444
               

               Cow position:
               chr3:2906808-2907265 (view UCSC Genome Browser custom track)
               

               Alignm length:
               464
               

               Alignm identity:
               314
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               22, 57
               

               Conread position:
               11-444
               

               Cow position:
               chr3:7157763-7158212 (view UCSC Genome Browser custom track)
               

               Alignm length:
               461
               

               Alignm identity:
               312
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               62, 19
               

               Conread position:
               11-444
               

               Cow position:
               chr3:7170161-7169716 (view UCSC Genome Browser custom track)
               

               Alignm length:
               452
               

               Alignm identity:
               289
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               62, 19
               

               Conread position:
               13-444
               

               Cow position:
               chr3:6686767-6686314 (view UCSC Genome Browser custom track)
               

               Alignm length:
               459
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 48
               

               Conread position:
               20-444
               

               Cow position:
               chr3:64016426-64016859 (view UCSC Genome Browser custom track)
               

               Alignm length:
               434
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               23-444
               

               Cow position:
               chr3:42052207-42052644 (view UCSC Genome Browser custom track)
               

               Alignm length:
               443
               

               Alignm identity:
               284
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               45, 38
               

               Conread position:
               110-449
               

               Cow position:
               chr3:19720827-19721172 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               204, 51
               

               Conread position:
               112-444
               

               Cow position:
               chr3:19800332-19800674 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               238
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               51, 66
               

               Conread position:
               113-432
               

               Cow position:
               chr3:30331642-30331972 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               231
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               197, 0
               

               Conread position:
               113-444
               

               Cow position:
               chr3:2918306-2917964 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 66
               

               Conread position:
               113-444
               

               Cow position:
               chr3:3523865-3523523 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 65
               

               Conread position:
               113-444
               

               Cow position:
               chr3:29330438-29330767 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               219
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               50, 66
               

               Conread position:
               113-444
               

               Cow position:
               chr3:37969885-37969549 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               200, 0
               

               Conread position:
               113-444
               

               Cow position:
               chr3:42433062-42432722 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               237
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               196, 27
               

               Conread position:
               113-444
               

               Cow position:
               chr3:45033591-45033245 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               238
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               50, 66
               

               Conread position:
               113-444
               

               Cow position:
               chr3:47177429-47177772 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               236
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               50, 66
               

               Conread position:
               113-444
               

               Cow position:
               chr3:53516456-53516116 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               113-444
               

               Cow position:
               chr3:64651472-64651130 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               236
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               201, 0
               

               Conread position:
               113-444
               

               Cow position:
               chr3:68699120-68699462 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               225
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               201, 0
               

               Conread position:
               113-444
               

               Cow position:
               chr3:75040317-75040659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               201, 0
               

               Conread position:
               113-445
               

               Cow position:
               chr3:19879497-19879160 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               237
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               201, 65
               

               Conread position:
               113-449
               

               Cow position:
               chr3:18860256-18859910 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               243
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               50, 66
               

               Conread position:
               122-444
               

               Cow position:
               chr3:24315304-24314970 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               233
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               37, 243
               

               Conread position:
               122-444
               

               Cow position:
               chr3:47080578-47080907 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               229
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               41, 56
               

               Conread position:
               127-444
               

               Cow position:
               chr3:36118492-36118165 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               229
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               36, 52
               

               Conread position:
               127-444
               

               Cow position:
               chr3:41210904-41211231 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               229
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               36, 51
               

               Conread position:
               127-444
               

               Cow position:
               chr3:66890134-66890459 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               229
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               34, 41
               

               Conread position:
               127-447
               

               Cow position:
               chr3:42994843-42995176 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               223
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               110, 106
               

               Conread position:
               127-448
               

               Cow position:
               chr3:19889773-19890101 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               220
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               187, 22
               

               Conread position:
               127-449
               

               Cow position:
               chr3:40339283-40339616 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               232
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               36, 52
               

               Conread position:
               144-444
               

               Cow position:
               chr3:19737395-19737084 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               222
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               19, 33
               

               Conread position:
               145-419
               

               Cow position:
               chr3:6783180-6782902 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               194
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               18, 34
               

               Conread position:
               145-444
               

               Cow position:
               chr3:68872944-68873251 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               211
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               16, 23
               

               Conread position:
               169-444
               

               Cow position:
               chr3:14438978-14439257 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               69, 9
               

               Conread position:
               192-449
               

               Cow position:
               chr3:52654129-52654382 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               198
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               122, 64
               

               Conread position:
               196-444
               

               Cow position:
               chr3:24589247-24589502 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               118, 60
               

               Conread position:
               196-449
               

               Cow position:
               chr3:32616234-32616495 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               196
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               118, 16
               

               Conread position:
               216-424
               

               Cow position:
               chr3:52727353-52727137 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               164
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               254-444
               

               Cow position:
               chr3:51243074-51242874 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               274-444
               

               Cow position:
               chr3:13967326-13967507 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               3-427
               

               Cow position:
               chr4:28832339-28831889 (view UCSC Genome Browser custom track)
               

               Alignm length:
               451
               

               Alignm identity:
               299
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               5-444
               

               Cow position:
               chr4:1929869-1930316 (view UCSC Genome Browser custom track)
               

               Alignm length:
               451
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 22
               

               Conread position:
               6-383
               

               Cow position:
               chr4:493828-494208 (view UCSC Genome Browser custom track)
               

               Alignm length:
               391
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 55
               

               Conread position:
               10-127
               

               Cow position:
               chr4:967310-967427 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               93
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               58, 51
               

               Conread position:
               10-450
               

               Cow position:
               chr4:44924759-44925213 (view UCSC Genome Browser custom track)
               

               Alignm length:
               467
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 17
               

               Conread position:
               11-270
               

               Cow position:
               chr4:27294550-27294809 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               57, 50
               

               Conread position:
               11-444
               

               Cow position:
               chr4:159928-159462 (view UCSC Genome Browser custom track)
               

               Alignm length:
               469
               

               Alignm identity:
               309
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               22, 51
               

               Conread position:
               11-444
               

               Cow position:
               chr4:5880922-5880474 (view UCSC Genome Browser custom track)
               

               Alignm length:
               455
               

               Alignm identity:
               302
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               62, 50
               

               Conread position:
               110-444
               

               Cow position:
               chr4:46665169-46664830 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               243
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               204, 44
               

               Conread position:
               113-444
               

               Cow position:
               chr4:603665-603323 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               241
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               25, 33
               

               Conread position:
               113-444
               

               Cow position:
               chr4:3126442-3126104 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               237
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               50, 72
               

               Conread position:
               113-444
               

               Cow position:
               chr4:17093216-17093556 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               235
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               192, 313
               

               Conread position:
               113-444
               

               Cow position:
               chr4:18423874-18424216 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               113-444
               

               Cow position:
               chr4:27334363-27334017 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               235
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               202, 0
               

               Conread position:
               113-444
               

               Cow position:
               chr4:32212820-32212476 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               238
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               113-444
               

               Cow position:
               chr4:60263515-60263851 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               145, 79
               

               Conread position:
               127-444
               

               Cow position:
               chr4:4416707-4416383 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 52
               

               Conread position:
               130-449
               

               Cow position:
               chr4:58689459-58689784 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 49
               

               Conread position:
               169-444
               

               Cow position:
               chr4:16326181-16326466 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               209
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               145, 7
               

               Conread position:
               172-449
               

               Cow position:
               chr4:41958715-41958429 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               142, 13
               

               Conread position:
               176-444
               

               Cow position:
               chr4:1367580-1367853 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               150, 38
               

               Conread position:
               183-444
               

               Cow position:
               chr4:54239589-54239319 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               122, 180
               

               Conread position:
               187-449
               

               Cow position:
               chr4:41955037-41954774 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               145, 113
               

               Conread position:
               210-448
               

               Cow position:
               chr4:54159177-54158935 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               177
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               103, 89
               

               Conread position:
               218-444
               

               Cow position:
               chr4:100390-100625 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               163
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               99, 80
               

               Conread position:
               285-444
               

               Cow position:
               chr4:13548507-13548337 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               129
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               321-450
               

               Cow position:
               chr4:968205-968341 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               4-444
               

               Cow position:
               chr5:45701185-45700718 (view UCSC Genome Browser custom track)
               

               Alignm length:
               469
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 58
               

               Conread position:
               5-449
               

               Cow position:
               chr5:10775398-10775867 (view UCSC Genome Browser custom track)
               

               Alignm length:
               472
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 58
               

               Conread position:
               6-444
               

               Cow position:
               chr5:18121613-18122073 (view UCSC Genome Browser custom track)
               

               Alignm length:
               469
               

               Alignm identity:
               320
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               13, 22
               

               Conread position:
               11-444
               

               Cow position:
               chr5:1341169-1341628 (view UCSC Genome Browser custom track)
               

               Alignm length:
               463
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 20
               

               Conread position:
               11-444
               

               Cow position:
               chr5:35300961-35300502 (view UCSC Genome Browser custom track)
               

               Alignm length:
               463
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 19
               

               Conread position:
               11-444
               

               Cow position:
               chr5:38073895-38073435 (view UCSC Genome Browser custom track)
               

               Alignm length:
               464
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 19
               

               Conread position:
               11-444
               

               Cow position:
               chr5:42505868-42505407 (view UCSC Genome Browser custom track)
               

               Alignm length:
               466
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 19
               

               Conread position:
               11-444
               

               Cow position:
               chr5:44460346-44459886 (view UCSC Genome Browser custom track)
               

               Alignm length:
               464
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 19
               

               Conread position:
               11-444
               

               Cow position:
               chr5:45181281-45181741 (view UCSC Genome Browser custom track)
               

               Alignm length:
               464
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 19
               

               Conread position:
               113-444
               

               Cow position:
               chr5:3965195-3964853 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               240
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               50, 66
               

               Conread position:
               113-444
               

               Cow position:
               chr5:4757418-4757760 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               201, 0
               

               Conread position:
               113-444
               

               Cow position:
               chr5:6588277-6588616 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               228
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               50, 66
               

               Conread position:
               113-444
               

               Cow position:
               chr5:23959570-23959912 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 64
               

               Conread position:
               113-444
               

               Cow position:
               chr5:26078453-26078793 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               239
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               201, 65
               

               Conread position:
               113-444
               

               Cow position:
               chr5:44784168-44784510 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               238
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               50, 64
               

               Conread position:
               113-444
               

               Cow position:
               chr5:46776815-46776482 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               232
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               50, 65
               

               Conread position:
               113-444
               

               Cow position:
               chr5:46808057-46807715 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               239
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               50, 66
               

               Conread position:
               113-444
               

               Cow position:
               chr5:48467535-48467877 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               239
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               50, 66
               

               Conread position:
               113-450
               

               Cow position:
               chr5:28024256-28023912 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 106
               

               Conread position:
               113-450
               

               Cow position:
               chr5:59061359-59061011 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               243
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               50, 64
               

               Conread position:
               118-444
               

               Cow position:
               chr5:241940-241605 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 60
               

               Conread position:
               122-363
               

               Cow position:
               chr5:51335524-51335771 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               192, 0
               

               Conread position:
               122-444
               

               Cow position:
               chr5:18664528-18664195 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               234
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               41, 57
               

               Conread position:
               122-444
               

               Cow position:
               chr5:27908538-27908869 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               230
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               192, 109
               

               Conread position:
               122-444
               

               Cow position:
               chr5:47893802-47894134 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               224
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               71, 75
               

               Conread position:
               122-449
               

               Cow position:
               chr5:47830335-47830673 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               238
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               41, 57
               

               Conread position:
               154-444
               

               Cow position:
               chr5:2531956-2531658 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               217
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               160, 18
               

               Conread position:
               169-444
               

               Cow position:
               chr5:4089756-4089474 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               144, 7
               

               Conread position:
               214-444
               

               Cow position:
               chr5:18666638-18666397 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               223-444
               

               Cow position:
               chr5:14380777-14380546 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               164
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               4-256
               

               Cow position:
               chr6:7834529-7834268 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               184
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               43, 59
               

               Conread position:
               5-379
               

               Cow position:
               chr6:40866314-40866705 (view UCSC Genome Browser custom track)
               

               Alignm length:
               395
               

               Alignm identity:
               264
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               68, 26
               

               Conread position:
               5-380
               

               Cow position:
               chr6:39438775-39438378 (view UCSC Genome Browser custom track)
               

               Alignm length:
               400
               

               Alignm identity:
               274
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               123, 26
               

               Conread position:
               5-444
               

               Cow position:
               chr6:7178281-7178724 (view UCSC Genome Browser custom track)
               

               Alignm length:
               455
               

               Alignm identity:
               300
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               27, 126
               

               Conread position:
               5-444
               

               Cow position:
               chr6:13105070-13104602 (view UCSC Genome Browser custom track)
               

               Alignm length:
               472
               

               Alignm identity:
               318
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               27, 57
               

               Conread position:
               5-444
               

               Cow position:
               chr6:44000071-43999606 (view UCSC Genome Browser custom track)
               

               Alignm length:
               470
               

               Alignm identity:
               318
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               68, 22
               

               Conread position:
               5-446
               

               Cow position:
               chr6:8203195-8202725 (view UCSC Genome Browser custom track)
               

               Alignm length:
               472
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 57
               

               Conread position:
               6-444
               

               Cow position:
               chr6:8760283-8760754 (view UCSC Genome Browser custom track)
               

               Alignm length:
               476
               

               Alignm identity:
               318
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               67, 24
               

               Conread position:
               8-444
               

               Cow position:
               chr6:35875708-35876168 (view UCSC Genome Browser custom track)
               

               Alignm length:
               464
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 257
               

               Conread position:
               9-127
               

               Cow position:
               chr6:31636407-31636525 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               93
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               59, 51
               

               Conread position:
               10-295
               

               Cow position:
               chr6:31565152-31565451 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               217
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               64, 50
               

               Conread position:
               11-444
               

               Cow position:
               chr6:27170580-27170125 (view UCSC Genome Browser custom track)
               

               Alignm length:
               459
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 20
               

               Conread position:
               21-450
               

               Cow position:
               chr6:28104866-28105315 (view UCSC Genome Browser custom track)
               

               Alignm length:
               456
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 41
               

               Conread position:
               113-442
               

               Cow position:
               chr6:13847913-13847573 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               238
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               50, 193
               

               Conread position:
               113-442
               

               Cow position:
               chr6:43618602-43618262 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               232
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               50, 66
               

               Conread position:
               113-442
               

               Cow position:
               chr6:44032678-44032339 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               236
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               201, 122
               

               Conread position:
               113-444
               

               Cow position:
               chr6:185582-185924 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               236
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               50, 66
               

               Conread position:
               113-444
               

               Cow position:
               chr6:330580-330921 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               238
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               50, 66
               

               Conread position:
               113-444
               

               Cow position:
               chr6:7140576-7140917 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               237
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               201, 87
               

               Conread position:
               113-444
               

               Cow position:
               chr6:12665433-12665774 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               239
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               50, 65
               

               Conread position:
               113-444
               

               Cow position:
               chr6:13944793-13944452 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               238
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               50, 35
               

               Conread position:
               113-444
               

               Cow position:
               chr6:16052766-16052425 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               238
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               50, 64
               

               Conread position:
               113-444
               

               Cow position:
               chr6:26669979-26670323 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               238
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               202, 0
               

               Conread position:
               113-444
               

               Cow position:
               chr6:28490682-28491020 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               225
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               58, 66
               

               Conread position:
               113-444
               

               Cow position:
               chr6:40252547-40252206 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               237
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               201, 248
               

               Conread position:
               113-444
               

               Cow position:
               chr6:40275974-40275633 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               236
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               50, 64
               

               Conread position:
               113-444
               

               Cow position:
               chr6:66232701-66232361 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               230
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               122-428
               

               Cow position:
               chr6:28133807-28133502 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               216
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               204, 82
               

               Conread position:
               122-444
               

               Cow position:
               chr6:2375576-2375246 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               225
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               192, 242
               

               Conread position:
               127-444
               

               Cow position:
               chr6:184911-185238 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               223
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               105, 48
               

               Conread position:
               128-444
               

               Cow position:
               chr6:27529133-27529456 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               221
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               186, 278
               

               Conread position:
               145-444
               

               Cow position:
               chr6:44149702-44150011 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               215
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               172, 0
               

               Conread position:
               167-444
               

               Cow position:
               chr6:40325851-40326137 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               208
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               108, 9
               

               Conread position:
               205-445
               

               Cow position:
               chr6:16635033-16634789 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               107, 141
               

               Conread position:
               219-444
               

               Cow position:
               chr6:65842365-65842130 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               164
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               71, 137
               

               Conread position:
               220-444
               

               Cow position:
               chr6:39909304-39909072 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               232-444
               

               Cow position:
               chr6:33500-33277 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               160
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               239-444
               

               Cow position:
               chr6:3048505-3048721 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               153
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               239-444
               

               Cow position:
               chr6:10498963-10499179 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               239-444
               

               Cow position:
               chr6:24322620-24322836 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               239-444
               

               Cow position:
               chr6:69221449-69221665 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               280-449
               

               Cow position:
               chr6:31565474-31565651 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               31, 5
               

               Conread position:
               4-444
               

               Cow position:
               chr7:8144133-8144603 (view UCSC Genome Browser custom track)
               

               Alignm length:
               476
               

               Alignm identity:
               324
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               124, 26
               

               Conread position:
               4-444
               

               Cow position:
               chr7:63386835-63386373 (view UCSC Genome Browser custom track)
               

               Alignm length:
               467
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 61
               

               Conread position:
               5-392
               

               Cow position:
               chr7:39097406-39097790 (view UCSC Genome Browser custom track)
               

               Alignm length:
               397
               

               Alignm identity:
               253
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               63, 25
               

               Conread position:
               5-444
               

               Cow position:
               chr7:21930238-21929784 (view UCSC Genome Browser custom track)
               

               Alignm length:
               460
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 22
               

               Conread position:
               5-444
               

               Cow position:
               chr7:53407707-53407265 (view UCSC Genome Browser custom track)
               

               Alignm length:
               456
               

               Alignm identity:
               297
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               121, 21
               

               Conread position:
               14-447
               

               Cow position:
               chr7:63556034-63555593 (view UCSC Genome Browser custom track)
               

               Alignm length:
               445
               

               Alignm identity:
               290
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               114, 12
               

               Conread position:
               101-443
               

               Cow position:
               chr7:23837560-23837211 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               140, 102
               

               Conread position:
               113-429
               

               Cow position:
               chr7:49604728-49604401 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               231
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               50, 66
               

               Conread position:
               113-444
               

               Cow position:
               chr7:15897-16238 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               236
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               201, 142
               

               Conread position:
               113-444
               

               Cow position:
               chr7:995493-995159 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               236
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               125, 121
               

               Conread position:
               113-444
               

               Cow position:
               chr7:3300179-3300521 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               236
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               50, 66
               

               Conread position:
               113-444
               

               Cow position:
               chr7:6580165-6579823 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               201, 0
               

               Conread position:
               113-444
               

               Cow position:
               chr7:6647680-6648021 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 66
               

               Conread position:
               113-444
               

               Cow position:
               chr7:11447536-11447192 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               234
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               50, 66
               

               Conread position:
               113-444
               

               Cow position:
               chr7:20774355-20774688 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               226
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               50, 66
               

               Conread position:
               113-444
               

               Cow position:
               chr7:20798465-20798805 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               238
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               50, 66
               

               Conread position:
               113-444
               

               Cow position:
               chr7:60794322-60794666 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               239
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               113-448
               

               Cow position:
               chr7:545820-545480 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 64
               

               Conread position:
               113-450
               

               Cow position:
               chr7:65811809-65811462 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               233
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               49, 66
               

               Conread position:
               122-444
               

               Cow position:
               chr7:7258142-7257809 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               231
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               192, 0
               

               Conread position:
               122-444
               

               Cow position:
               chr7:27101326-27101659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               235
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               41, 57
               

               Conread position:
               122-449
               

               Cow position:
               chr7:58994561-58994223 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               224
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               162, 64
               

               Conread position:
               127-444
               

               Cow position:
               chr7:20514813-20515138 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 52
               

               Conread position:
               134-444
               

               Cow position:
               chr7:61809188-61808867 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 43
               

               Conread position:
               187-444
               

               Cow position:
               chr7:61560112-61559848 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               188
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               127, 83
               

               Conread position:
               205-421
               

               Cow position:
               chr7:26852561-26852334 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               182
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 0
               

               Conread position:
               253-443
               

               Cow position:
               chr7:67813391-67813189 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               143
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               265-444
               

               Cow position:
               chr7:21320981-21320791 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               5-444
               

               Cow position:
               chr8:14927592-14928056 (view UCSC Genome Browser custom track)
               

               Alignm length:
               469
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 26
               

               Conread position:
               5-444
               

               Cow position:
               chr8:25775384-25775844 (view UCSC Genome Browser custom track)
               

               Alignm length:
               466
               

               Alignm identity:
               307
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               38, 58
               

               Conread position:
               5-444
               

               Cow position:
               chr8:32630738-32631205 (view UCSC Genome Browser custom track)
               

               Alignm length:
               470
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 56
               

               Conread position:
               5-444
               

               Cow position:
               chr8:42485204-42484741 (view UCSC Genome Browser custom track)
               

               Alignm length:
               469
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 22
               

               Conread position:
               6-138
               

               Cow position:
               chr8:32647657-32647526 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               102
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               62, 55
               

               Conread position:
               6-449
               

               Cow position:
               chr8:9964183-9964649 (view UCSC Genome Browser custom track)
               

               Alignm length:
               468
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 443
               

               Conread position:
               10-449
               

               Cow position:
               chr8:38585059-38585515 (view UCSC Genome Browser custom track)
               

               Alignm length:
               464
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 20
               

               Conread position:
               11-444
               

               Cow position:
               chr8:6064493-6064946 (view UCSC Genome Browser custom track)
               

               Alignm length:
               462
               

               Alignm identity:
               305
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               62, 19
               

               Conread position:
               11-444
               

               Cow position:
               chr8:8555866-8556325 (view UCSC Genome Browser custom track)
               

               Alignm length:
               464
               

               Alignm identity:
               310
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               62, 19
               

               Conread position:
               11-444
               

               Cow position:
               chr8:30891033-30891494 (view UCSC Genome Browser custom track)
               

               Alignm length:
               464
               

               Alignm identity:
               311
               

               Alignm E-value:
               8.96831e-44
               

               Alignm gaps (pig, cow):
               62, 16
               

               Conread position:
               11-444
               

               Cow position:
               chr8:37932373-37931913 (view UCSC Genome Browser custom track)
               

               Alignm length:
               463
               

               Alignm identity:
               310
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               62, 19
               

               Conread position:
               21-443
               

               Cow position:
               chr8:8308865-8308420 (view UCSC Genome Browser custom track)
               

               Alignm length:
               451
               

               Alignm identity:
               293
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               107, 40
               

               Conread position:
               23-450
               

               Cow position:
               chr8:35213152-35212701 (view UCSC Genome Browser custom track)
               

               Alignm length:
               460
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 17
               

               Conread position:
               110-447
               

               Cow position:
               chr8:20136443-20136788 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               230
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               50, 40
               

               Conread position:
               113-444
               

               Cow position:
               chr8:1320206-1319864 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               241
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               50, 74
               

               Conread position:
               113-444
               

               Cow position:
               chr8:9736403-9736069 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               232
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               50, 75
               

               Conread position:
               113-444
               

               Cow position:
               chr8:17312188-17311848 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               232
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               201, 251
               

               Conread position:
               113-444
               

               Cow position:
               chr8:27579559-27579219 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               238
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               50, 66
               

               Conread position:
               113-444
               

               Cow position:
               chr8:44243416-44243745 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               226
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               253, 189
               

               Conread position:
               122-310
               

               Cow position:
               chr8:42158831-42159017 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               46, 56
               

               Conread position:
               122-444
               

               Cow position:
               chr8:10749519-10749193 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               222
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               41, 18
               

               Conread position:
               122-444
               

               Cow position:
               chr8:11969127-11969457 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               192, 0
               

               Conread position:
               122-444
               

               Cow position:
               chr8:47068657-47068984 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               232
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               40, 57
               

               Conread position:
               127-444
               

               Cow position:
               chr8:11763091-11762762 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               219
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               127-444
               

               Cow position:
               chr8:32436932-32437262 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               234
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               36, 51
               

               Conread position:
               127-450
               

               Cow position:
               chr8:34348824-34348490 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               233
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               36, 52
               

               Conread position:
               145-402
               

               Cow position:
               chr8:32041613-32041880 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               186
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               149, 0
               

               Conread position:
               145-444
               

               Cow position:
               chr8:1153186-1153487 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               211
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               18, 33
               

               Conread position:
               149-444
               

               Cow position:
               chr8:8517459-8517761 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               213
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               165, 69
               

               Conread position:
               173-444
               

               Cow position:
               chr8:6684551-6684269 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               204
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               141, 0
               

               Conread position:
               175-447
               

               Cow position:
               chr8:11822391-11822133 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               185
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               191, 115
               

               Conread position:
               187-444
               

               Cow position:
               chr8:25376851-25376583 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               196
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               127, 0
               

               Conread position:
               193-450
               

               Cow position:
               chr8:38577325-38577582 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               196
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               16, 149
               

               Conread position:
               214-444
               

               Cow position:
               chr8:1348172-1348410 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               168
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               100, 44
               

               Conread position:
               239-444
               

               Cow position:
               chr8:19591171-19590955 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               239-449
               

               Cow position:
               chr8:15711378-15711600 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               285-449
               

               Cow position:
               chr8:42569621-42569447 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               128
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               1-444
               

               Cow position:
               chr9:2053691-2053230 (view UCSC Genome Browser custom track)
               

               Alignm length:
               470
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 26
               

               Conread position:
               3-444
               

               Cow position:
               chr9:9706484-9706024 (view UCSC Genome Browser custom track)
               

               Alignm length:
               464
               

               Alignm identity:
               304
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               123, 35
               

               Conread position:
               3-446
               

               Cow position:
               chr9:7016822-7016367 (view UCSC Genome Browser custom track)
               

               Alignm length:
               468
               

               Alignm identity:
               299
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               71, 27
               

               Conread position:
               4-292
               

               Cow position:
               chr9:13474850-13475150 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               200
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               112, 23
               

               Conread position:
               4-444
               

               Cow position:
               chr9:9014037-9013576 (view UCSC Genome Browser custom track)
               

               Alignm length:
               463
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 391
               

               Conread position:
               5-444
               

               Cow position:
               chr9:3565907-3566361 (view UCSC Genome Browser custom track)
               

               Alignm length:
               462
               

               Alignm identity:
               303
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               63, 14
               

               Conread position:
               5-444
               

               Cow position:
               chr9:60277076-60277541 (view UCSC Genome Browser custom track)
               

               Alignm length:
               469
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 22
               

               Conread position:
               5-448
               

               Cow position:
               chr9:44819087-44818647 (view UCSC Genome Browser custom track)
               

               Alignm length:
               458
               

               Alignm identity:
               306
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               115, 26
               

               Conread position:
               5-449
               

               Cow position:
               chr9:54925492-54925021 (view UCSC Genome Browser custom track)
               

               Alignm length:
               475
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 16
               

               Conread position:
               7-442
               

               Cow position:
               chr9:25633073-25633530 (view UCSC Genome Browser custom track)
               

               Alignm length:
               461
               

               Alignm identity:
               293
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               66, 54
               

               Conread position:
               7-444
               

               Cow position:
               chr9:42310617-42310162 (view UCSC Genome Browser custom track)
               

               Alignm length:
               466
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 20
               

               Conread position:
               7-449
               

               Cow position:
               chr9:29329573-29329129 (view UCSC Genome Browser custom track)
               

               Alignm length:
               458
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 54
               

               Conread position:
               8-444
               

               Cow position:
               chr9:3005313-3005770 (view UCSC Genome Browser custom track)
               

               Alignm length:
               463
               

               Alignm identity:
               308
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               65, 53
               

               Conread position:
               11-444
               

               Cow position:
               chr9:28440742-28440282 (view UCSC Genome Browser custom track)
               

               Alignm length:
               464
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 19
               

               Conread position:
               11-444
               

               Cow position:
               chr9:36725415-36724976 (view UCSC Genome Browser custom track)
               

               Alignm length:
               446
               

               Alignm identity:
               293
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               62, 19
               

               Conread position:
               11-444
               

               Cow position:
               chr9:50791646-50791186 (view UCSC Genome Browser custom track)
               

               Alignm length:
               465
               

               Alignm identity:
               317
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               42, 19
               

               Conread position:
               11-444
               

               Cow position:
               chr9:51211614-51211156 (view UCSC Genome Browser custom track)
               

               Alignm length:
               461
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 19
               

               Conread position:
               12-447
               

               Cow position:
               chr9:5515351-5514894 (view UCSC Genome Browser custom track)
               

               Alignm length:
               460
               

               Alignm identity:
               307
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               41, 53
               

               Conread position:
               39-435
               

               Cow position:
               chr9:3167837-3167430 (view UCSC Genome Browser custom track)
               

               Alignm length:
               417
               

               Alignm identity:
               288
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               29, 22
               

               Conread position:
               110-442
               

               Cow position:
               chr9:20308329-20308673 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               227
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               60, 173
               

               Conread position:
               113-444
               

               Cow position:
               chr9:3998827-3998486 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               240
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               50, 27
               

               Conread position:
               113-444
               

               Cow position:
               chr9:4942995-4943338 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 66
               

               Conread position:
               113-444
               

               Cow position:
               chr9:17063573-17063913 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               233
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               50, 65
               

               Conread position:
               113-444
               

               Cow position:
               chr9:28678786-28678447 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               241
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               50, 65
               

               Conread position:
               113-445
               

               Cow position:
               chr9:1075401-1075724 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               229
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               50, 66
               

               Conread position:
               122-444
               

               Cow position:
               chr9:1251190-1251523 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               229
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               192, 0
               

               Conread position:
               122-444
               

               Cow position:
               chr9:30827484-30827154 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               232
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               41, 55
               

               Conread position:
               127-444
               

               Cow position:
               chr9:45874136-45873820 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               224
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               36, 50
               

               Conread position:
               127-445
               

               Cow position:
               chr9:221726-222055 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               223
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               36, 52
               

               Conread position:
               130-448
               

               Cow position:
               chr9:2210090-2209763 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               224
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               100, 45
               

               Conread position:
               187-444
               

               Cow position:
               chr9:780063-780330 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               196
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               123, 197
               

               Conread position:
               1-448
               

               Cow position:
               chrX:21589819-21589345 (view UCSC Genome Browser custom track)
               

               Alignm length:
               476
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 250
               

               Conread position:
               3-125
               

               Cow position:
               chrX:10416609-10416730 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               99
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               65, 58
               

               Conread position:
               3-449
               

               Cow position:
               chrX:41888132-41888612 (view UCSC Genome Browser custom track)
               

               Alignm length:
               483
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 57
               

               Conread position:
               5-426
               

               Cow position:
               chrX:21269210-21269656 (view UCSC Genome Browser custom track)
               

               Alignm length:
               452
               

               Alignm identity:
               304
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               22, 58
               

               Conread position:
               5-444
               

               Cow position:
               chrX:6872225-6872693 (view UCSC Genome Browser custom track)
               

               Alignm length:
               471
               

               Alignm identity:
               314
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               27, 57
               

               Conread position:
               5-444
               

               Cow position:
               chrX:29097041-29096588 (view UCSC Genome Browser custom track)
               

               Alignm length:
               455
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 22
               

               Conread position:
               5-449
               

               Cow position:
               chrX:13416589-13417050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               469
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 16
               

               Conread position:
               8-444
               

               Cow position:
               chrX:15599811-15599346 (view UCSC Genome Browser custom track)
               

               Alignm length:
               467
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 402
               

               Conread position:
               10-450
               

               Cow position:
               chrX:2011855-2012293 (view UCSC Genome Browser custom track)
               

               Alignm length:
               456
               

               Alignm identity:
               304
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               63, 51
               

               Conread position:
               11-444
               

               Cow position:
               chrX:3084286-3084742 (view UCSC Genome Browser custom track)
               

               Alignm length:
               461
               

               Alignm identity:
               303
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               62, 19
               

               Conread position:
               11-444
               

               Cow position:
               chrX:7752740-7752279 (view UCSC Genome Browser custom track)
               

               Alignm length:
               466
               

               Alignm identity:
               316
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               62, 19
               

               Conread position:
               11-444
               

               Cow position:
               chrX:29172923-29173381 (view UCSC Genome Browser custom track)
               

               Alignm length:
               463
               

               Alignm identity:
               313
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               62, 16
               

               Conread position:
               11-449
               

               Cow position:
               chrX:15980119-15980582 (view UCSC Genome Browser custom track)
               

               Alignm length:
               468
               

               Alignm identity:
               313
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               64, 19
               

               Conread position:
               12-441
               

               Cow position:
               chrX:22816689-22816232 (view UCSC Genome Browser custom track)
               

               Alignm length:
               460
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 48
               

               Conread position:
               13-311
               

               Cow position:
               chrX:21971656-21971358 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               183
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               262, 13
               

               Conread position:
               21-444
               

               Cow position:
               chrX:23020160-23019709 (view UCSC Genome Browser custom track)
               

               Alignm length:
               453
               

               Alignm identity:
               304
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               47, 40
               

               Conread position:
               101-443
               

               Cow position:
               chrX:4797058-4796700 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               243
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               110-407
               

               Cow position:
               chrX:28554335-28554037 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               199
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               204, 124
               

               Conread position:
               113-444
               

               Cow position:
               chrX:2562136-2562477 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               230
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               50, 66
               

               Conread position:
               113-444
               

               Cow position:
               chrX:2604769-2604428 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               203, 0
               

               Conread position:
               113-444
               

               Cow position:
               chrX:3420485-3420810 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               230
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               50, 65
               

               Conread position:
               113-444
               

               Cow position:
               chrX:5283055-5283397 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               238
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               50, 66
               

               Conread position:
               113-444
               

               Cow position:
               chrX:5335764-5336106 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               239
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               50, 64
               

               Conread position:
               113-444
               

               Cow position:
               chrX:5394288-5394621 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               224
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               50, 66
               

               Conread position:
               113-444
               

               Cow position:
               chrX:7482354-7482012 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               239
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               50, 66
               

               Conread position:
               113-444
               

               Cow position:
               chrX:8480371-8480030 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               237
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               50, 66
               

               Conread position:
               113-444
               

               Cow position:
               chrX:8588886-8588558 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               224
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               219, 181
               

               Conread position:
               113-444
               

               Cow position:
               chrX:8962854-8963193 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               231
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               50, 66
               

               Conread position:
               113-444
               

               Cow position:
               chrX:9126081-9125743 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 66
               

               Conread position:
               113-444
               

               Cow position:
               chrX:11422593-11422254 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 66
               

               Conread position:
               113-444
               

               Cow position:
               chrX:12287682-12288023 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               231
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               201, 44
               

               Conread position:
               113-444
               

               Cow position:
               chrX:12353963-12353620 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               238
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               47, 67
               

               Conread position:
               113-444
               

               Cow position:
               chrX:12654040-12654382 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               233
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               50, 66
               

               Conread position:
               113-444
               

               Cow position:
               chrX:12702982-12703324 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 66
               

               Conread position:
               113-444
               

               Cow position:
               chrX:13075976-13076317 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               238
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               50, 66
               

               Conread position:
               113-444
               

               Cow position:
               chrX:13096550-13096891 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               240
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               50, 66
               

               Conread position:
               113-444
               

               Cow position:
               chrX:16276368-16276029 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               242
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               50, 70
               

               Conread position:
               113-444
               

               Cow position:
               chrX:16362402-16362744 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 66
               

               Conread position:
               113-444
               

               Cow position:
               chrX:17477703-17478045 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               201, 0
               

               Conread position:
               113-444
               

               Cow position:
               chrX:20315340-20315682 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               232
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               201, 0
               

               Conread position:
               113-444
               

               Cow position:
               chrX:26399458-26399801 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               242
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               50, 65
               

               Conread position:
               113-444
               

               Cow position:
               chrX:28757773-28758115 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 66
               

               Conread position:
               113-444
               

               Cow position:
               chrX:29910703-29911045 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               232
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               50, 66
               

               Conread position:
               113-444
               

               Cow position:
               chrX:29935317-29934981 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 66
               

               Conread position:
               113-444
               

               Cow position:
               chrX:31186502-31186844 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               224
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               201, 0
               

               Conread position:
               113-444
               

               Cow position:
               chrX:32066443-32066782 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               236
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               50, 65
               

               Conread position:
               113-444
               

               Cow position:
               chrX:35530584-35530242 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               241
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               50, 62
               

               Conread position:
               113-444
               

               Cow position:
               chrX:37812884-37812542 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 65
               

               Conread position:
               113-444
               

               Cow position:
               chrX:39563213-39563553 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               230
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               85, 271
               

               Conread position:
               113-449
               

               Cow position:
               chrX:983384-983036 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               244
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               50, 65
               

               Conread position:
               113-449
               

               Cow position:
               chrX:5864116-5863769 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               240
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               49, 66
               

               Conread position:
               113-449
               

               Cow position:
               chrX:11148614-11148958 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 67
               

               Conread position:
               113-449
               

               Cow position:
               chrX:20797689-20797350 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               243
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               162, 38
               

               Conread position:
               113-449
               

               Cow position:
               chrX:22618577-22618924 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               237
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               50, 67
               

               Conread position:
               120-449
               

               Cow position:
               chrX:18659073-18659410 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               229
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               43, 59
               

               Conread position:
               122-444
               

               Cow position:
               chrX:971488-971155 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 55
               

               Conread position:
               122-444
               

               Cow position:
               chrX:1834531-1834198 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               235
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               41, 57
               

               Conread position:
               122-444
               

               Cow position:
               chrX:9009048-9008718 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               227
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               192, 0
               

               Conread position:
               122-449
               

               Cow position:
               chrX:21341109-21340775 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               230
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               41, 57
               

               Conread position:
               124-444
               

               Cow position:
               chrX:27425615-27425940 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               222
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               191, 30
               

               Conread position:
               126-427
               

               Cow position:
               chrX:30171124-30171436 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               221
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               104, 110
               

               Conread position:
               143-449
               

               Cow position:
               chrX:24324889-24325204 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               219
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               18, 36
               

               Conread position:
               145-444
               

               Cow position:
               chrX:11464313-11464622 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               223
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               18, 34
               

               Conread position:
               145-444
               

               Cow position:
               chrX:15178735-15179045 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               218
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               18, 39
               

               Conread position:
               146-444
               

               Cow position:
               chrX:10530874-10531178 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               214
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               17, 33
               

               Conread position:
               146-444
               

               Cow position:
               chrX:22611631-22611326 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               212
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               17, 33
               

               Conread position:
               149-444
               

               Cow position:
               chrX:27987141-27987442 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               19, 30
               

               Conread position:
               153-450
               

               Cow position:
               chrX:6249763-6250058 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               166, 110
               

               Conread position:
               178-444
               

               Cow position:
               chrX:20359394-20359671 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               197
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               136, 0
               

               Conread position:
               193-444
               

               Cow position:
               chrX:29793482-29793742 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               121, 10
               

               Conread position:
               194-444
               

               Cow position:
               chrX:12343583-12343334 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               183
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               172, 121
               

               Conread position:
               194-444
               

               Cow position:
               chrX:30057773-30057512 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               190
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               115, 0
               

               Conread position:
               199-444
               

               Cow position:
               chrX:30173035-30173291 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               179
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               115, 0
               

               Conread position:
               208-444
               

               Cow position:
               chrX:24090021-24089782 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               106, 159
               

               Conread position:
               236-450
               

               Cow position:
               chrX:26427049-26427272 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               77, 96
               

               Conread position:
               239-444
               

               Cow position:
               chrX:506735-506951 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               244-448
               

               Cow position:
               chrX:24377626-24377413 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               63, 35
               

               Conread position:
               266-444
               

               Cow position:
               chrX:30011608-30011419 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               135
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               278-449
               

               Cow position:
               chrX:10416737-10416917 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               287-444
               

               Cow position:
               chrX:7094146-7093978 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               126
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               27, 0
Conread position:	4-444
Cow position:	chr1:31365007-31365461 (view UCSC Genome Browser custom track)
Alignm length:	459
Alignm identity:	306
Alignm E-value:	0
Alignm gaps (pig, cow):	64, 17
Conread position:	5-443
Cow position:	chr1:40575307-40574840 (view UCSC Genome Browser custom track)
Alignm length:	470
Alignm identity:	322
Alignm E-value:	0
Alignm gaps (pig, cow):	27, 57
Conread position:	5-444
Cow position:	chr1:11291020-11291482 (view UCSC Genome Browser custom track)
Alignm length:	469
Alignm identity:	307
Alignm E-value:	2e-34
Alignm gaps (pig, cow):	27, 57
Conread position:	6-447
Cow position:	chr1:88374716-88375156 (view UCSC Genome Browser custom track)
Alignm length:	448
Alignm identity:	278
Alignm E-value:	4e-31
Alignm gaps (pig, cow):	121, 90
Conread position:	9-426
Cow position:	chr1:31328412-31328845 (view UCSC Genome Browser custom track)
Alignm length:	441
Alignm identity:	286
Alignm E-value:	4e-30
Alignm gaps (pig, cow):	120, 11
Conread position:	9-449
Cow position:	chr1:44100310-44100777 (view UCSC Genome Browser custom track)
Alignm length:	477
Alignm identity:	341
Alignm E-value:	0
Alignm gaps (pig, cow):	64, 30
Conread position:	11-425
Cow position:	chr1:61310306-61309867 (view UCSC Genome Browser custom track)
Alignm length:	443
Alignm identity:	296
Alignm E-value:	9e-39
Alignm gaps (pig, cow):	62, 16
Conread position:	11-440
Cow position:	chr1:28711977-28711519 (view UCSC Genome Browser custom track)
Alignm length:	462
Alignm identity:	316
Alignm E-value:	0
Alignm gaps (pig, cow):	62, 19
Conread position:	11-444
Cow position:	chr1:44044868-44044408 (view UCSC Genome Browser custom track)
Alignm length:	464
Alignm identity:	322
Alignm E-value:	0
Alignm gaps (pig, cow):	62, 19
Conread position:	21-444
Cow position:	chr1:58336914-58336464 (view UCSC Genome Browser custom track)
Alignm length:	453
Alignm identity:	307
Alignm E-value:	0
Alignm gaps (pig, cow):	47, 40
Conread position:	113-442
Cow position:	chr1:82912170-82912515 (view UCSC Genome Browser custom track)
Alignm length:	348
Alignm identity:	232
Alignm E-value:	1e-30
Alignm gaps (pig, cow):	50, 64
Conread position:	113-444
Cow position:	chr1:8555296-8554957 (view UCSC Genome Browser custom track)
Alignm length:	341
Alignm identity:	238
Alignm E-value:	0
Alignm gaps (pig, cow):	50, 66
Conread position:	113-449
Cow position:	chr1:29363261-29362917 (view UCSC Genome Browser custom track)
Alignm length:	349
Alignm identity:	234
Alignm E-value:	2e-34
Alignm gaps (pig, cow):	201, 52
Conread position:	113-450
Cow position:	chr1:31397659-31397311 (view UCSC Genome Browser custom track)
Alignm length:	351
Alignm identity:	241
Alignm E-value:	4.00001e-41
Alignm gaps (pig, cow):	50, 66
Conread position:	120-434
Cow position:	chr1:98658947-98659270 (view UCSC Genome Browser custom track)
Alignm length:	325
Alignm identity:	214
Alignm E-value:	1e-30
Alignm gaps (pig, cow):	132, 128
Conread position:	122-444
Cow position:	chr1:33852245-33851911 (view UCSC Genome Browser custom track)
Alignm length:	335
Alignm identity:	237
Alignm E-value:	0
Alignm gaps (pig, cow):	41, 0
Conread position:	122-447
Cow position:	chr1:11860291-11860617 (view UCSC Genome Browser custom track)
Alignm length:	335
Alignm identity:	223
Alignm E-value:	1e-29
Alignm gaps (pig, cow):	114, 53
Conread position:	127-442
Cow position:	chr1:18241566-18241884 (view UCSC Genome Browser custom track)
Alignm length:	324
Alignm identity:	230
Alignm E-value:	0
Alignm gaps (pig, cow):	187, 71
Conread position:	127-444
Cow position:	chr1:56490804-56490477 (view UCSC Genome Browser custom track)
Alignm length:	330
Alignm identity:	233
Alignm E-value:	5.60519e-45
Alignm gaps (pig, cow):	36, 50
Conread position:	127-450
Cow position:	chr1:21088367-21088032 (view UCSC Genome Browser custom track)
Alignm length:	337
Alignm identity:	238
Alignm E-value:	0
Alignm gaps (pig, cow):	36, 52