Cow genome map
| Conread name: | unkn-SGD602702254.R1 |
| Conread position: | 1-189 |
| Cow position: | chr1:53485026-53484838 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 187 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-358 |
| Cow position: | chr1:51697046-51696676 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 1-225 |
| Cow position: | chr10:43409296-43409069 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 1-452 |
| Cow position: | chr10:64154808-64155256 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 404 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 29 |
| Conread position: | 77-435 |
| Cow position: | chr11:13155887-13156244 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 47 |
| Conread position: | 1-247 |
| Cow position: | chr13:8868343-8868580 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 69 |
| Conread position: | 1-443 |
| Cow position: | chr13:32826892-32827339 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 263 |
| Conread position: | 3-115 |
| Cow position: | chr13:21223884-21223771 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 99 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 6-452 |
| Cow position: | chr13:44192067-44192495 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 426 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 185, 0 |
| Conread position: | 31-136 |
| Cow position: | chr13:32918514-32918621 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 93 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 323-450 |
| Cow position: | chr14:13344047-13343916 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 3-413 |
| Cow position: | chr16:16093241-16093655 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 87 |
| Conread position: | 29-325 |
| Cow position: | chr17:30287178-30287472 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 60 |
| Conread position: | 3-442 |
| Cow position: | chr18:30331029-30330592 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 27 |
| Conread position: | 5-148 |
| Cow position: | chr19:8158765-8158910 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 119-358 |
| Cow position: | chr19:12530082-12529833 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 73 |
| Conread position: | 184-315 |
| Cow position: | chr19:25986508-25986638 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 121 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 1-117 |
| Cow position: | chr2:31915124-31915240 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 113 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 297-413 |
| Cow position: | chr2:1335759-1335878 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 100 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 3-165 |
| Cow position: | chr20:23027461-23027303 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 116, 27 |
| Conread position: | 2-137 |
| Cow position: | chr21:22722813-22722938 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 117, 28 |
| Conread position: | 2-452 |
| Cow position: | chr21:38860338-38859878 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 409 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 423 |
| Conread position: | 181-406 |
| Cow position: | chr21:16587143-16586916 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 28 |
| Conread position: | 2-123 |
| Cow position: | chr22:25992681-25992560 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 120 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 33-144 |
| Cow position: | chr22:39521100-39520989 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 94 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 86, 10 |
| Conread position: | 1-147 |
| Cow position: | chr24:44504717-44504576 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 113 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 120, 83 |
| Conread position: | 2-326 |
| Cow position: | chr24:19040842-19041164 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 71 |
| Conread position: | 5-452 |
| Cow position: | chr24:43085682-43086128 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 12 |
| Conread position: | 92-285 |
| Cow position: | chr25:8602550-8602749 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 28, 106 |
| Conread position: | 1-165 |
| Cow position: | chr26:2345434-2345597 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 163 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 3-197 |
| Cow position: | chr26:16850139-16849945 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 69, 107 |
| Conread position: | 3-235 |
| Cow position: | chr26:3021054-3020823 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 85 |
| Conread position: | 24-185 |
| Cow position: | chr26:21279190-21279350 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 13, 48 |
| Conread position: | 2-169 |
| Cow position: | chr27:18937781-18937616 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 89, 28 |
| Conread position: | 1-252 |
| Cow position: | chr28:20181525-20181272 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 19-137 |
| Cow position: | chr28:16234058-16233936 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 141-452 |
| Cow position: | chr28:16233766-16233457 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 113 |
| Conread position: | 1-242 |
| Cow position: | chr29:449699-449456 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 11-149 |
| Cow position: | chr29:603174-603315 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 75, 134 |
| Conread position: | 70-235 |
| Cow position: | chr29:32529528-32529361 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 141 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 12, 93 |
| Conread position: | 1-178 |
| Cow position: | chr4:36252034-36251858 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 158 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 87 |
| Conread position: | 3-179 |
| Cow position: | chr4:49472587-49472760 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 154 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 1-149 |
| Cow position: | chr6:14863539-14863689 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 131 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 118, 0 |
| Conread position: | 1-230 |
| Cow position: | chr6:45094350-45094581 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 0 |
| Conread position: | 1-452 |
| Cow position: | chr6:50335422-50335877 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 416 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 17-452 |
| Cow position: | chr6:13098255-13098692 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 22 |
| Conread position: | 157-367 |
| Cow position: | chr6:44836792-44837000 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 178 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 140 |
| Conread position: | 366-452 |
| Cow position: | chr6:44837204-44837291 (view UCSC Genome Browser custom track) |
| Alignm length: | 88 |
| Alignm identity: | 78 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 1-401 |
| Cow position: | chr7:8831058-8830663 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 89 |
| Conread position: | 2-201 |
| Cow position: | chr7:11762237-11762037 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 163 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 20, 79 |
| Conread position: | 3-144 |
| Cow position: | chr7:24450300-24450444 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 270-448 |
| Cow position: | chr7:24450986-24451172 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 160 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 1-452 |
| Cow position: | chr8:54077840-54078291 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 87 |