| Group | ID | Species Name | Length | Accessions |
|---|---|---|---|---|
| Fungi | Sacc.cere._U14595 | Saccharomyces cerevisiae (baker's yeast) | 1302 | U14595 |
| Fungi | Sacc.mika._AY639011 | Saccharomyces mikatae | 1216 | AY639011 |
| Fungi | Sacc.para._AY639015 | Saccharomyces paradoxus | 1162 | AY639015 |
| Fungi | Sacc.cari._AY737251 | Saccharomyces cariocanus strain NCYC 2890 | 1177 | AY737251 |
| Fungi | Sacc.kudr._AY737252 | Saccharomyces kudriavzevii strain NCYC 2889 | 1227 | AY737252 |
| Fungi | Sacc.kudr._AY639012 | Saccharomyces kudriavzevii | 1216 | AY639012 |
| Fungi | Sacc.baya._AY639013 | Saccharomyces bayanus | 1220 | AY639013 |
| Fungi | Sacc.past._AY639014 | Saccharomyces pastorianus | 1197 | AY639014 |
| Fungi | Kluy.dobz._AY151278 | Kluyveromyces dobzhanskii | 1317 | AY151278 |
| Fungi | Kluy.lact._U31465 | Kluyveromyces lactis | 1327 | U31465 |
| Fungi | Kluy.lact._CR382122 | Kluyveromyces lactis strain NRRL Y-1140 | 1328 | CR382122 |
| Fungi | Kluy.wick._AY151281 | Kluyveromyces wickerhamii | 1037 | AY151281 |
| Fungi | Kluy.aest._AY151277 | Kluyveromyces aestuarii | 934 | AY151277 |
| Fungi | Kluy.nonf._AY151280 | Kluyveromyces nonfermentans | 929 | AY151280 |
| Fungi | Kluy.marx._AY151279 | Kluyveromyces marxianus | 1268 | AY151279 |
| Alveolata | Tetr.ther._AF399707 | Tetrahymena thermophila | 160 | AF399707 |
| Alveolata | Tetr.aust._U22349 | Tetrahymena australis | 160 | U22349 |
| Alveolata | Tetr.bore._U22350 | Tetrahymena borealis | 158 | U22350 |
| Alveolata | Tetr.capr._U22351 | Tetrahymena capricornis | 157 | U22351 |
| Alveolata | Tetr.para._U22352 | Tetrahymena paravorax | 148 | U22352 |
| Alveolata | Tetr.silv._U22353 | Tetrahymena silvana | 151 | U22353 |
| Alveolata | Tetr.vora._U22354 | Tetrahymena vorax | 159 | U22354 |
| Alveolata | Colp.camp._AF417609 | Colpidium campylum | 162 | AF417609 |
| Alveolata | Colp.colp._AF417610 | Colpidium colpoda | 158 | AF417610 |
| Alveolata | Colp.stri._AF417611 | Colpidium striatum | 162 | AF417611 |
| Alveolata | Glau.spec._AF417612 | Glaucoma species ME60q | 163 | AF417612 |
| Alveolata | Eupl.aedi._U10565 | Euplotes aediculatus | 190 | U10565 |
| Alveolata | Eupl.eury._U10566 | Euplotes eurystomus | 190 | U10566 |
| Alveolata | Mono.cras._M33461 | Monoeuplotes crassus | 192 | M33461 |
| Alveolata | Oxyt.nova._U10567 | Oxytricha nova H10 (Sterkiella nova) | 191 | U10567 |
| Alveolata | Oxyt.trif._U10568 | Oxytricha trifallax (Sterkiella histriomuscorum) | 187 | U10568 |
| Alveolata | Styl.lemn._U10569 | Stylonychia lemnae | 190 | U10569 |
| Alveolata | Styl.myti._U10570 | Stylonychia mytilis | 190 | U10570 |
| Alveolata | Para.caud._U45437 | Paramecium caudatum | 204 | U45437 |
| Alveolata | Para.tetr._U45433 | Paramecium tetraurelia | 206 | U45433 |
| Alveolata | Para.prim._U45434 | Paramecium primaurelia | 206 | U45434 |
| Alveolata | Para.mult._U45436 | Paramecium multimicronucleatum | 202 | U45436 |
| Chondrichthyes | Dasy.sabi._AF221914 | Dasyatis sabina (Atlantic stingray) | 479 | AF221914 |
| Chondrichthyes | Rhin.bona._AF221935 | Rhinoptera bonasus (cownose ray) | 492 | AF221935 |
| Chondrichthyes | Rhiz.poro._AF221915 | Rhizoprionodon porosus (Caribbean sharpnose shark) | 549 | AF221915 |
| Chondrichthyes | Must.cani._AF221933 | Mustelus canis (smooth dogfish shark) | 560 | AF221933 |
| Amphibia | Xeno.laev._AF221908 | Xenopus laevis (African clawed frog) | 450 | AF221908 |
| Amphibia | Bufo.japo._AF221913 | Bufo japonicus (Japanese toad) | 413 | AF221913 |
| Amphibia | Cera.orna._AF221926 | Ceratophrys ornata (ornate horned frog) | 406 | AF221926 |
| Amphibia | Pyxi.adsp._AF221940 | Pyxicephalus adspersus (bullfrog) | 398 | AF221940 |
| Amphibia | Derm.mexi._AF221934 | Dermophis mexicanus (Mexican burrowing caecilian) | 446 | AF221934 |
| Amphibia | Herp.squa._AF221927 | Herpele squalostoma (herpele) | 445 | AF221927 |
| Amphibia | Typh.nata._AF221910 | Typhlonectes natans (Rio Cauca caecilian) | 444 | AF221910 |
| Reptilia | Chel.serp._AF221911 | Chelydra serpentina (snapping turtle) | 411 | AF221911 |
| Aves | Gall.gall._AF221938 | Gallus gallus (chicken) | 466 | AF221938 |
| Aves | Gall.gall._AY312571 | Gallus gallus | 463 | AY312571 |
| Aves | Anod.hyac._AF221924 | Anodorhynchus hyacinthinus (macaw) | 435 | AF221924 |
| Mammalia | Dasy.hall._AF221919 | Dasyurus hallucatus (northern quoll) | 509 | AF221919 |
| Mammalia | Ratt.norv._AF221916 | Rattus norvegicus (Norway rat) | 389 | AF221916 |
| Mammalia | Mus.spre._AY058901 | Mus spretus (western wild mouse) | 398 | AY058901 |
| Mammalia | Mus.musc._AY058900 | Mus musculus castaneus (southeastern Asian house mouse) | 398 | AY058900 |
| Mammalia | Mus.musc._AF221922 | Mus musculus (house mouse) | 398 | AF221922 |
| Mammalia | Mus.musc._AF047387 | Mus musculus | 422 | AF047387 |
| Mammalia | Mus.musc._U33831 | Mus musculus | 421 | U33831 |
| Mammalia | Micr.ochr._AF221909 | Microtus ochrogaster (prairie vole) | 400 | AF221909 |
| Mammalia | Sunc.muri._AF221921 | Suncus murinus (house shrew) | 452 | AF221921 |
| Mammalia | Geom.brev._AF221930 | Geomys breviceps (gopher) | 450 | AF221930 |
| Mammalia | Must.puto._AF221931 | Mustela putorius furo (domestic ferret) | 444 | AF221931 |
| Mammalia | Proc.loto._AF221917 | Procyon lotor (raccoon) | 445 | AF221917 |
| Mammalia | Feli.catu._AF221939 | Felis catus (cat) | 447 | AF221939 |
| Mammalia | Sus.scro._AF221920 | Sus scrofa (pig) | 444 | AF221920 |
| Mammalia | Munt.munt._AY760074 | Muntiacus muntjak vaginalis --partial-- | 322 | AY760074 |
| Mammalia | Bos.taur._AF221936 | Bos taurus (cow) | 444 | AF221936 |
| Mammalia | Bos.taur._AF054814 | Bos taurus | 430 | AF054814 |
| Mammalia | Bos.taur._AF221941 | Bos taurus | 430 | AF221941 |
| Mammalia | Equu.caba._AF221925 | Equus caballus (horse) | 444 | AF221925 |
| Mammalia | Cavi.porc._AF221929 | Cavia porcellus (domestic guinea pig) | 422 | AF221929 |
| Mammalia | Chin.brev._AF221937 | Chinchilla brevicaudata (chinchilla) | 448 | AF221937 |
| Mammalia | Tupa.glis._AF221912 | Tupaia glis belangeri (northern tree shrew) | 468 | AF221912 |
| Mammalia | Oryc.cuni._AF221918 | Oryctolagus cuniculus (rabbit) | 452 | AF221918 |
| Mammalia | Dasy.nove._AF221906 | Dasypus novemcinctus (Amardillo) | 451 | AF221906 |
| Mammalia | Elep.maxi._AF221932 | Elephas maximus (Asiatic elephant) | 455 | AF221932 |
| Mammalia | Cani.fami._AY833720 | Canis familiaris (dog) --partial-- | 291 | AY833720 |
| Mammalia | Tric.mana._AF221923 | Trichechus manatus (Caribbean manatee) | 471 | AF221923 |
| Mammalia | Maca.mula._XM_001093354 | Macaca mulatta | 445 | XM_001093354 |
| Mammalia | Homo.sapi._AF221907 | Homo sapiens (human) | 451 | AF221907 |
| Mammalia | Homo.sapi._AC078802 | Homo sapiens | 438 | AC078802 |
| Mammalia | Homo.sapi._AF047386 | Homo sapiens | 437 | AF047386 |
| Mammalia | Homo.sapi._U85256 | Homo sapiens | 438 | U85256 |
| Mammalia | Homo.sapi._U86046 | Homo sapiens | 438 | U86046 |
| Viruses | Gall.herp._AF331499 | Gallid herpesvirus 1 | 439 | AF331499 |
| Viruses | Gall.herp._AF147806-1 | Gallid herpesvirus 2 (Marek's disease virus type 1) | 449 | AF147806 |
| Viruses | Gall.herp._AF147806-2 | Gallid herpesvirus 2 (Marek's disease virus type 1) | 449 | AF147806 |
| Viruses | Gall.herp._AF243438 | Gallid herpesvirus 2 (Marek's disease virus type 1) | 439 | AF243438 |
| Viruses | Gall.herp._AY510475 | Gallid herpesvirus 2 | 439 | AY510475 |