CR382128.1/1675383-1675296     uuaca-augaugau-ccaaauu--------gcauuu-uuucuggcaucucuaauguuagcguc-cuccg-----------g--gacccgaugaauauaa-uuuuu-ac-------ucugaaa
AE016819.2/1466134-1466239     uuucacaugaugau-cuauucu--------agcuuu-uuucuggcaucucuaauguuaggaug-agaaguuuaaguacucuc-cauucgaugaauacaa-ccuaugac---uauaucugaac
CR382122.1/717566-717458       uuuca-augaugac-uacaucu--------agguacauuucuggcaucucuaauguuagggug-g-gcguuuaaguacuucu-cacucgaugaauagaaaccuuuaaccauaauaacugaaa
DQ115391.1/34856-34969         ucaua-augaugau-uucacuuauaccuauauguuuuuuucuggcaucucuaauguuaggaug-cgaaguuuaaguacucuc-cauucaaugaauacaa-uuuuugac---aauaucugauu
AF064261.1/1-113               ucaua-augaugau-uucacuuauaccuauauguuu-uuucuggcaucucuaauguuaggaug-ugaaguuuaaguacucuc-cauucaaugaauacaa-uuuuugac---aauaucugauu
CR380957.1/422688-422806       cuaca-augaugacacucauauuuuguuaccuauuu-uuucuggcaucucuaaugcuagagcagcgacguuuaaguacuuuccugcucgaugaauauaaacaaaugac-uacaagacugaca
SS_cons                        ...........................................................<<<<....................>>>>...................................
