BA000004.3/3129240-3129168     caaugacuacaaccgcaca--gacuagguuuaua--------------aaug-g--------------------------------aucuc---------------------------------ccu---------------------------accu--agaa-uggcgagucugaguauauga
AP006627.1/2726276-2726204     augaacuuacaaccgcgca--gauuaggcguuaa--------------aaug-g--------------------------------caugu---------------------------------ccu---------------------------gccu--auga-uggcgagucugauguuauga
X59528.1/1870-1945             ccauugcuacaaccgcuca--guacagguguu----------------aa-gagcu------------------------------uuuac-------------------------------agcc----------------------------cccug-guaucuggcgagucuuagucuaaua
CP000002.2/2808169-2808095     cccgugcuacaaccgcuca--gcacaggcguu----------------aa-gugcu------------------------------uucuu-------------------------------agcc----------------------------cccu--gugacuggcgagucuuaguuuauua
AE017012.1/146313-146236       uauaugcuacaaccgcaca--agacagguucccu--------------aa-a-ggca------------------------------uuua------------------------------ugucu----------------------------accuc-guuuuuggcgagucuuaguaauuaa
AE017038.1/162115-162038       uauaugcuacaaccgcaca--agacagguucccua-------------aa-g-gcau------------------------------guau------------------------------gu-cu----------------------------accu-cguuuuuggcgagucuuaguaauuaa
CP000001.1/4296486-4296409     uauaugcuacaaccgcaca--agacagguucccu--------------aa-a-ggca------------------------------uuua------------------------------ugucu----------------------------accuc-guuuuuggcgagucuuaguaauuaa
AE017355.1/4241632-4241555     uauaugcuacaaccgcaca--agacagguucccu--------------aa-a-ggca------------------------------ugua------------------------------ugucu----------------------------accuc-guuuuuggcgagucuuaguaauuaa
AE017278.1/166763-166686       uauaugcuacaaccgcaca--agacagguuccuu--------------aa-a-ggca------------------------------uuua------------------------------ugucu----------------------------accuc-guuuuuggcgagucuuaguaauuaa
BA000043.1/2624432-2624353     cccgcacuacaaccgcuca--gcgcgggcgaug---------------aa-gcgcuccg----------------------------ucu-----------------------------u-gggcc----------------------------gccuuggcgc-uggcgagucugaguccauga
BA000028.3/2073684-2073564     cccgugcuacaaccgcaca--gaauaggugaguguaaa----------aa-g-cguaaaacagc-----------------------auuc-----------------------guuguuuuuugcuuaacauuuuuaaaauccguauuggauuaccu--aaa--uggcgagucugaguugaaug
AE017327.1/89529-89451         accaagcuacaaccgcaca--gagcuggguc-----------------aa-guauuuac---------------------------uucgu----------------------------guaaauc----------------------------cccu--guga-uggcgagucuuaguauauga
AL596169.1/30615-30537         accaagcuacaaccgcaca--gagcuggguu-----------------aa-guauuuac---------------------------cuugu----------------------------guaaguc----------------------------cccu--guaa-uggcgagucuuaguauauga
AE016748.1/155946-155870       agcuacauacaaccgcucg-cauacagguug-----------------aa-guacaau-----------------------------cau------------------------------auuguc----------------------------accu--guauauggcgugacuuauuauauag
CP000046.1/1733601-1733474     agcuacauacaaccgcuca-aauauagguuc-----------------aa-gaacauuuu----uaaugaagaaagcgauuuucccacagagugcaaacgcuugacucaauaac----gaaauguc----------------------------accu--auguauggcgugacuuauuauacag
AF349567.1/44-171              agcuacauacaaccgcuca-aauauagguuc-----------------aa-gaacauuuu----uaaugaagaaagcgauuuucccacagagugcaaacgcuugacucaauaac----gaaauguc----------------------------accu--auguauggcgugacuuauuauacag
AP006716.1/1307326-1307403     agcuacauacaaccgcuca--aauauagguuu----------------aa-g-aacau----------------------------uuuuuu----------------------------aug-uca---------------------------ccua--uaua-uggcgugacuuauuaauaua
CP000029.1/1248763-1248687     agcuacauacaaccgcucg-cauacagguug-----------------aa-guacaau-----------------------------cau------------------------------auuguc----------------------------accu--guauauggcgugacuuauuauauag
AE007639.1/3-82                ggcacauguagaccgcaca--aaacggguuuuuauu------------aa-a-cacaa-----------------------------uuua-----------------------------uugugu----------------------------accc--cuau-uggcgaggccguaaaugagg
AE016950.1/2378-2453           ccacagcuacaaccgcaca--gaacaaguuuuu---------------aa-gcauga------------------------------guaa------------------------------ucauc----------------------------acuu--ggga-uggcgagucuaagucuagaa
AE017204.1/217426-217346       ucacaucugcaaccgcacguuuaugagguuag----------------aa-gagaauua----------------------------acgu----------------------------uaauucc----------------------------accu--caug-cggcgagucuaaguauuuuu
AL935256.1/197559-197632       cuacagcuacaaccgcacg--gauugagucuu----------------aa-gauca-------------------------------gcaa-------------------------------uggc----------------------------acuu--acauucggcgagucuaagugauuua
CP000033.1/1314637-1314558     ccacaucugcaaccgcacg--gcuaggguuag----------------aa-gacuucuu----------------------------gagu----------------------------aagaagc----------------------------accc--caguucggcgagucuaaguauuuuu
AE006340.1/7585-7658           cauaaagugcaaccgcacg-aaguuucguauu----------------aa-guggc-------------------------------auac-------------------------------gccc----------------------------acg---aacaaaggcgagucuaacagucgcu
AE007411.1/7401-7488           gauccugugcaaccgcacg--aacaucguugcuugauuauucaaguuuaa-gugg-------------------------------uucgu--------------------------------ccc----------------------------acga--ugcu-aggcgagucuucacaaaaaa
CP000023.1/400958-401034       cguccugugcaaccgcacg--acuacuguuuuugu-------------aa-guggg------------------------------uucgu-------------------------------cccc----------------------------gcag--uacu-aggcgagucuucacagaggg
BA000034.2/1289235-1289161     cauccugugcaaccgcgcg--aaaaucguuauc---------------aa-guagac------------------------------caa-------------------------------gucuc----------------------------acga--uucc-aggcgagucuucacagaggg
AE006533.1/29-103              cauccugugcaaccgcgcg--aaaaucguuguc---------------aa-guagac------------------------------caa-------------------------------gucuc----------------------------acga--uucc-aggcgagucuucacagaggg
AL766850.1/177942-177863       cauccugugcaaccgcgcg--aaaaucguuagauu-------------aa-guagggc-----------------------------aag------------------------------gcucuc----------------------------acga--uuuauaggcgagucuucacagaggg
AE014254.1/19390-19311         cauccugugcaaccgcgcg--aaaaucguuagauu-------------aa-guagagc-----------------------------aag------------------------------gcucuc----------------------------acga--uuuauaggcgagucuucacagaggg
AE014926.1/3864-3939           cauccugugcaaccgcacg--aaaaucgcuuuu---------------aa-gcagcu-----------------------------uucgu------------------------------agcuc----------------------------acga--uuu--aggcgagucuucacggagga
BX842643.1/289131-289058       aaaaaguuucaaccgcucu-uuuguauguucua---------------aa-gcag-------------------------------uauau--------------------------------cuc----------------------------acgc--acau-aggcgagucuagacuggagg
AE002120.1/9351-9276           augcagcuucaaccacuca--aaaaagguuuaaaaaua----------aauguua--------------------------------auu---------------------------------uau----------------------------accu--uau--uggugagucuaaguugauaa
SS_cons                        .............<<<.<<..<<<<<<<<......................<.<<<<<<<<<<<..................................................>>>>>>>>>>>>............................>>>>..>>>>.>>>>>...............
