BX897700.1/1185322-1185013     cuugcccaaagucgcacgugccuguggguguccgcuggu---ucucaaa-uggugagauuaaccggu------------------------------------------------------------------------------------------------acgguacauggaauuaaccacuccagucau-ucuuacggccaaccgaaaga-gugaggacaucuugaagcaacgacggugcgggccuuucuggu-gucuuccagcugucaaaaugcuggggua---acuauagaggca-cacc-ucauugccuucagugcggaagu-ggu-uuucucaacuccaaucaaaaaggcagaaaaaguagagcaacgugguuuu---cacgcuguuuu---ucgcugcaugcaauguugcuuucuuc
BX897699.1/1422017-1421707     uuugcccaaagucgcacgugccuguggguguccgcuggu---ucucaaa-uggugagauuaaccggu------------------------------------------------------------------------------------------------acgguaccuggaacuaaccgcuccagucau-ucuuacggccaaccgaaaga-augaggacaucuugaagcaacgacggugcgggccuuucuggu-gucuuccagcuguccaaaugcugggaua---acuauagaggca-cacc-ucauugccuucagugcggaagu-ggu-uuucucaacuccaaucaaaaaggcagaaaaaguaaagcaacgcgauuuu---cgcgcuguuuu--uucgcugcaugcaaugcugcuuucuuc
BX572595.1/268384-267970       cuugcccaauuucgcacgugcccguggucgugugucagucgguagguau-ccggacaagaggccggacagccgccaagggaugaagagccgagggucuccaagcguucgcgcagcgaggccagcaucucucucaagagaugccguugaagguggcuuccucucuugcaaccgugacugacagccggaggcgaaccggcgcaccucguucucaacgagggacgcgacuuaaagcaacgacggagcgggcuuuuuuggu-cucugccggcuuuccaucagccggcgcgaauaccgaagaggcuuguccuucauugcc-agugagcgggc-gggauccuucccaa--ccaauccaag--gcagcacugcucguccgagcuga-ucgcucgucgcgccucc--aucgcgcgacggcgcugaagccgucgg
AE009744.1/10994-10767         -------------------------g-------------------------------------------------------------------------------------------------------------------------------------------------------------cuccagucga-ucugauggccaaccgccaga-ucgaggacaucuugaagcaacgacggugcgggccuuucuagu-gucuuucggcuguccaaaagucgaaauu---acugaagaggca-caccuucauugccagaagugcggaugc-ggu-ucucc-aauuccaagccaag--gcagacaaagcggaguaacgcu--uaguuuagcguuguucc--aucgccgcauaaaguuuucgcgugaca
AE009249.1/4437-4129           gcugcccaaagucgcacgugcccauguguguccgccgagu--ccucgauguggugaggauu-uaggu------------------------------------------------------------------------------------------------aagguaccuggaacuaaccccuccagucgc-uauuccggccaaccgggaaaugcgaggacauau-gaagcaacgacggugcgggccuuucugguucucugccggcuuuccaucagccggggu----acugaagaggca-caccaucauugccugaagugcgguc-g-ggucauuccc---uccaaucgaug--gcagacaaagccgaaugaugcuc-uggcagggcau-cguuc--acauucgcgccuugagcguaugcuauc
AL591792.1/58848-58537         cuugcccaaagucgcacgugccuguggguguccgccgac---ccucgauuaggugagguua-ucggu------------------------------------------------------------------------------------------------aagguaccuggaacuaaccccuccagucgc-uauuccggccaaccgggaaaugcgaggacaucuugaagcaacgacggugcgggccuuucuggu-gucugccggcucuccaacagccgggguu---acugaagaggca-caccuucauugccggaagugcgguu-ggguu-auuccc---uccaauccaug--gcagacaaagccgaauccuagccuuugcg-ggcuuugauucaaauucgcgcaucgagcgcaugcaugguu
SS_cons                        .........................<<<<<<<<..........................................................................................................................................................................................>>>>>>>>....<<<<.<<.<<<<...<<<<<<.<<<<......<<<<<<.......>>>>>>.......>>>>.>>>>>>..>>>>.>>.>>>>................................................................................................................
