BX927150.1/172169-172001       cauucaugugggccau-au-ugca--gaca-----ggg-a-cggggaaaccacccaccaucuuuucacaaaagaaggcauggaggc--caacu------------------ccuuggggu-gaagccag------------------------acauc-------------------------cacuggcagagca--acuccuc--c-------gcucuaacccgacagcuaaccucg-acggcg-a-caaaugagaggaaaa
AL939118.1/280215-280371       cgugcgcacgcgcc-g-aa-uccc--gcaa-----ggg-aaccggggaacca------------------------------------ccaca--------------------uuggggu-gaaucgggcg-----------------------uaugccgccgugggaacacggucggcaggcacccguaggag---accuuccu-g-------cuccgaacccgucagcuaacccggua-ggcg----aaaggaaggaaagg
AL939125.1/103160-103305       aguccccguacggc-gcga-gcc---agg-------gg-agccggggacccauc----------------------------------gcagu------------------cccuggggu-gaaucggacgcccgcg----------------cgcaccgcgaggg-----------------gguccguaggag---accuucca-c-------cuccgaacccgucagcuaacccggua-ggcg-------agagggaagga
AL939115.1/44787-44621         ucgcgucaagcgcc-g-aa-ggc------a------gg-agcgggggacccaagguaagugccgcaccgggcaguugagccggagcggcuagg-------------------gguggagccgaguuccgcga---------------------ggaa--------------------------cccggc-cgggca--acucaacc-g-------gcccgaacccgacagcucaccucgca-ggcg-u--cggugaggggauca
AL939121.1/140405-140238       aguccggccugccc-g-ca--cg---gcac------cggagccggggacccaaccga-------------------------------gaacu--------------------uuggggu-gaaucggccucaccgcccucgacgcgaggacggucc----------------------------gccguagggcaa-accuuccgcgccacaccgcccgaacccgacagcuaacccggua-ggcgga-gcacuggaaggaguc
AL939120.1/174742-174619       ccagguaagucgcc-g-ca-ccg---guca------cc-accggag----cg-------------------------------------gcu----------------------cggggu-gaagccguaccc--------------------gucagg------------------------gcacggccgggc---accuccc--c-------gcccgaacccgacagcucaccucgca-ggcg-u-----aaggagaggga
Z99106.2/69881-70024           gaaaacaaaucgcu-u-aa-ucug--aaau-----cag-agcgggggacccaauagaacggc--------------------------uuuuu----------------gccguuggggu-gaauccu-------------------------uuuu-----------------------------agguagggcua-acucucauau-------gcccgaauccgucagcuaaccucgua-agcg-u--ucgugagaggagau
Z99119.2/173775-173923         ucucuuuuaccgcu-u-aa-uca---aaca------cg-aacgggggaaccaacgauuggcuguu-----------------------uuauu-------------aacagccuuggggu-gaaucuua------------------------cuaa---------------------------guaag-agggggu-acucugaa-u-------cccu-aauccgacagcuaaccucgua-ggcg-u-auacagagaggaggu
AE017008.1/280218-280361       uaaaaccuuuugcu-g-ag-ucca--aauu----uugg-agcgggggaacca------------------------------------uuuuu-------guagcuaugcuacuuggggc-gaaucuu-------------------------uuuu-----------------------------aaguagggaa--acucucac-u-------ucccgaguccgacagcuaaccucgua-agcg-uaaugggagaggaaggu
AE017003.1/243756-243902       uuuucuaaaucgcu-g-aa-acc---gcau------gg-uacgggggacccg------------------------------------uuuuuacggauuaguacauaauccgauggggu-gaauccuu------------------------gaaa----------------------------aagguagggcu--acucaua--g-------gcccgaauccgacagcuaaccucgua-agcg-u--uauauugagaagga
AE017000.1/129012-129159       uuuuuguaaacgcu-g-ag-ucca--auua---uaugg-agcggaggaaccaa-----------------------------------uuugu----------gcagugucacuaggggu-gaaucuuuca----------------------aguu--------------------------ugaaaguagggcu--acucucaa-a-------guccgaauccgacagcuaacuucgua-agcg-u-cuugagagaggacgg
AE017034.1/230440-230582       uaaaaccuuuugcu-g-ag-ucca--aauu----uugg-agcgggggaacca------------------------------------cuuuu-------guagcuaugcuacuuggggc-gaaucuu-------------------------uuuu-----------------------------aaguaggga---acucucac-u-------ucccgaguccgacagcuaaccucgua-agcg-uaaugggagaggaaggu
AE017030.1/26833-26979         uuuucuaaaucgcu-g-aa-acc---gcau------gg-uacgggggacccguucuuauggauuag----------------------uucuu--------------aauccaauggggu-gaauccuu------------------------gaaa----------------------------aagguagggcu--acucaua--g-------gcccgaauccgacagcuaaccucgua-agcg-u--uauauugagaagga
AE017026.1/179648-179795       uuuuguaauacgcu-g-ag-ucca--auua---uaugg-agcggaggaaccaa-----------------------------------uuugu----------gcagugucacucggggu-gaaucuuuca----------------------auuu--------------------------ugaaaguagggcu--acucucaa-a-------gcccgaauccgacagcuaacuucgua-agcg-u-cuugagagaggacgg
AE017266.1/262400-262545       aaccuaaaaucgcu-g-aguucca--gaaa-----ugg-agcgggggaacca------------------------------------auuuu--------gugcaucgucacuuggggu-gaaucuuuca----------------------guuu--------------------------ugaaaguagggcu--acucuuua-g-------gcccgaauccgacagcuaaccucgua-agcg----uuuagagaggaggu
AE017266.1/261264-261411       uuuuguaauacgcu-g-ag-ucca--auua---uaugg-agcggaggaaccaa-----------------------------------uuugu----------gcagugucacuaggggu-gaaucuuuca----------------------auuu--------------------------ugaaaguagggcu--acucucaa-a-------guccgaauccgacagcuaacuucgua-agcg-u-cuugagagaggacgg
AE017274.1/273490-273633       uaaaaccuuuugcu-g-ag-ucca--aaau----uugg-agcgggggaacca------------------------------------uuuuu-------guagcuuugcuacuuggggc-gaaucuu-------------------------auuu-----------------------------aaguagggaa--acucucac-u-------ucccgaguccgacagcuaaccucgua-agcg-uaaugggagaggaaggu
AE007805.1/1159-1284           uaauaucauuagcc-u-aaauu----uuaa-------a-aacggggaaacca------------------------------------auuuu---------------------uggggu-gaaucgca------------------------uaaua-------------------------uaugcguagguuugugccuu------------uaccgaauccgucagcuaaccucgua-gaau----aaaaggaggaagau
AE007636.1/3809-3947           uccuuaagagugcc-g-aa-ucuua-auaauauuuaag-uacgggggaacac-------------------------------------auu----------------------gugggu-gaaucuuacgac--------------------uauu--------------------------cguaaguagggu---gccuuca----------acccgaauccguaagcuaaccucgga-ggcaaaauugauaaaggaaauu
AE015945.1/1135-1257           uaauaacauaagcc-u-aa-guu----uaa------aa-cgcgggggaacca------------------------------------uuaau---------------------uggggu-gaaucacau-----------------------uuau--------------------------uuuguguagguua--gccuu------------uaccgaacccgucagcuaaccccguu-ggua-----aaaggagugaaua
AF299117.1/4182-4326           uguagucaag-gcu-g-aa-uuucccaaaa---aggaa-aacgggggaacca-------------------------------------uaau---------------------gggggu-gaaucacuuuuuaggag---------------uuaaacuucuu-------------------gaagugacggaaa--gguauca----------uuccgaacccggcagcuaaccucgua-agcg-----ugugaaccguuuu
AE013055.1/1499-1628           uuugcaaucuugcc-g-aa-ucc---gaaa------gg-uacggaggaaccg------------------------------------cuuuu---------------------uggggu-uaaucugc------------------------ggauuc------------------------ccgcaguagggau--gccuucu--g-------ucccgcacccgacagcuaacuccgga-ggca-u--uaaaggaaggagau
AE013066.1/6212-6337           aguuaaaacaugcc-g-aa-uccccgauaa----gggg-uacgggggaugua-------------------------------------aauu---------------------uggggu-gaauccac------------------------guau---------------------------ugugguagggug--gcccuc-----------acccgaacccgucaacuaaccucgga-ggca------aaggggguaaau
AE013058.1/810-942             acaugcuaaacgcu-g-aa-uucg--uuaa------ga-agcgggggaccca------------------------------------cucuu--------------------uuggggu-gaauccaucu----------------------uuuaaa------------------------agaugguaggguu--aucuuuc--g-------acccgaacccgucagcuaaccccgua-agcg----uugaaagagaagga
AE013141.1/12818-12684         uaaucguuaucgcu-g-aa-cccg--aaaa------gg-ggcgggggaccca------------------------------------cacuu--------------------uuggggc-gaaucucu------------------------uccuacgg----------------------gaagaguaggguu--acuccuuc-g-------acccgagcccgucagcuaaccucgca-agcg-u--gggaaggagaaaua
SS_cons                        ..........<<<<......<<<.............>>.><<<<<<....<<..............................................................>><<<......<<<<........................................................>>>>..<<<<....................>>>>...>>>.........>>>>>>..>>>>..................
