pairingmask                ----11111-111111111--1111--111111111---------------------------------------------------------------------------------111111111--1111-111111111-11111----
AP004030.2/91144-91262     auguGcAUUgCaGGGCAAcuaCUCCauUGGCAGAgGgauggauugg---------auauggauauggcug---------augcuuccauuugauccca--uccc-------------UaUCUGCCAaaGGAGauUUGCCCaGcGAUuCacuc
AC111015.2/21804-21909     agcuGcAUUgCuGGGCAAGuugUCCuuUGGCAGaUGu------------------ugcaguucaucaucg---------augccug--gggguuacca----ga------------cUA-CUGCCAaaGGAaaUUUGCCCcGgAAUuCaucu
AK108715.1/1199-1094       agcuGcAUUgCuGGGCAAGuugUCCuuUGGCAGaUGu------------------ugcaguucaucaucg---------augccug--gggguuacca----ga------------cUA-CUGCCAaaGGAaaUUUGCCCcGgAAUuCauuc
AC111015.2/16598-16489     cggcGAAUUaCAGGGCGGUuuCUCCuuUGGCACGUAcggaggcaag---------gcaugcggugaaa----------aaucucua--------gcua--gcca-------------UGCGUGCCAaaGGAGaAUUGCCCUGcGAUUCacca
AP004030.2/79982-79886     gugaGAAUcaCAGuGCGAUu-CUCCucUGGCAUGGC-------aug---------agaggccuaaaaaaga-------gacgcacu-------------------------------GCCGUGCCAaaGGAGaAUUGCcCUGccAUUCagaa
AP004030.2/66544-66659     gugaGAAUcaCAGuGCAGUu-CUCCucUGGCAuGGA---gggcaag---------aggagcugaauagcu--------aauggauga-uaaacugcua--gccu------------uUCCcUGCCAaaGGAGaGCUGCcCUGccAUUCagug
AC111015.2/18487-18585     ccauGCAUUaCUGGGC-AGguCUCCcuUGGCAGUGG------ccga---------ucgagcugauca-----------aaccac----gcaaaag----------------------CCACUGCCAaaGGAGaCUuGCCCAGcAAUGCagau
AP003142.2/100157-100305   cuguGAAUUaCAGGGC-AguuCaCCuuUGGCACaAGggcaagcaguagaaaccaugcgugcuugcuagagcuggaaaugaugcuggu-agcauugcaug-guucagggaucacagauCUcGUGCCAaaGGaGaaUuGCCCUGcGAUUUuguc
AP003142.2/99250-99133     acauGCAUUaCcGGGUGAGu-CUUCcuUGGCAGUGuuc-gaaucgg---------caguaccggucugcaa-------gugaucgg--ucaaucacca--guuc------------acCGCUGCCAaaGGAGaUUUGCCCaGcAAUGCaacu
AC004481.3/13564-13465     gguuGGAUUaCuGGGCGAAuaCUCCuaUGGCAGA---------------------ucgcauuggcuagau---------augcaag--uaaaaugcuu--------------------cUCUGCCAaaGGAGaUUUGCCCcGcAAUUCaucc
AC021043.4/36317-36195     aaauGcAUUaCAGGGUAAGauCUCUauUGGCAGGaAac-cauuacu---------uagaucuuugcaucucuu-----uaugcauu--gcuuuuaauuagugag------------uUaUCUGCCAaaGGAGaUUUGCCCUGuAAUuCuucu
AC004481.3/13991-14099     gaaaGCAUUaCaGGGCGAAucCUCUauUGGCAGuGG---aaguuga---------ugacccuuauauguu---------au---uu--ucucaucauu------u-----------uCCuCUGCCAaaGGAGaUUUGCCUcGcAAUGCuuca
AC004481.3/15484-15601     auauGcAUUaCaGGGCAAGauCaCCauUGGCAGAGAuc-uauuacu---------ucauucuu-gcauca--------uaugcaua--aauguuugugg-ugag------------cUCUCUGCCAaaGGaGaUUUGCCCgGuAAUuCucuu
