Webserver for Aligning structural RNAs

Results

You can download the results in the following formats: fasta clustal stockholm col 


 
 RNAforester 


 CPU time:
 0.56
 

Average sequence ID:
 0.369664634146
 

Average free energy:
 -32.2255555556
 

Average covariation:
 0.46378968254
 

Average basepair probability:
 0.675763947398
 

Canonical basepairs:
 NA
 

Sequence and structure consensus for RNAforester 
MMMWYCWYSYKMKCCCWGKSKGAuGRKRKWRKAKKKURYAKWKUUwurgkBkWSGcaGSuMSUGMYCUYaggSCCSsWAKUmRRRAKAWM
WMUAYAMWMYMYWSUSYYUYCyCMWRuGGmug

............(((((((((((.(((((((((((((((((((((...((((.((..(((.(.....)...))))).)..))))....))
)))))))))))))))))))))))))).)))..


The alignment colored using colorrna.pl of the Vienna package 

Cluster tree of the methods Tree

Table