Webserver for Aligning structural RNAs

Results

You can download the results in the following formats: fasta clustal stockholm col 


 
 RNASampler 


 CPU time:
 892.78
 

Average sequence ID:
 0.219427503005
 

Average free energy:
 -24.828
 

Average covariation:
 0.653929093567
 

Average basepair probability:
 0.620563693486
 

Canonical basepairs:
 NA
 

Sequence and structure consensus for RNASampler 
sycCVWKRacaggaagcmmmMWGKGRHCmysugycYkYKYCRSUKchkvWYWAMMMUGSWGSCWSUYWSauucurwkuSUGAMRUSAAAA
WAASKAASWGVKWSSAKKKUKGuvwDSWSUGRVauausurdgRSYDKKUVMUyykkbcYCUAGgmhcYMMMM

.....(((.............(((((((..........(((((((.....(((((((((((((((((((.....................
...)))))))))))))))))))....)))))))............)))))))........))).........


The alignment colored using colorrna.pl of the Vienna package 

Cluster tree of the methods Tree

Table