Webserver for Aligning structural RNAs

Results

You can download the results in the following formats: fasta clustal stockholm col 


 
 RNAforester 


 CPU time:
 1.03
 

Average sequence ID:
 0.254542151163
 

Average free energy:
 -17.8066666667
 

Average covariation:
 0.331008044243
 

Average basepair probability:
 0.60983753808
 

Canonical basepairs:
 NA
 

Sequence and structure consensus for RNAforester 
CYMBsVScwKsGGSsGYSSUYBGKuSUYBWWGUKUUURKAVYacUSauKaRUGuaRWKaKSWRUYUAuKKMWrYyCgAcUCuAAYaSUWY
RWAMAYgRcKRAgkKuMMRRVRGMWVCcacYvkcYHAsSCHACMG

......((...(((.((((((((((.(.(((((((((((((((.....(.(((..((.(.(........))).).).).))..).)))))
))))).)).)).).).)))))))))).).....))).........


The alignment colored using colorrna.pl of the Vienna package 

Cluster tree of the methods Tree

Table