Webserver for Aligning structural RNAs

Results

You can download the results in the following formats: fasta clustal stockholm col 


 
 RNAalifold 


 CPU time:
 .07
 

Average sequence ID:
 0.339989759345
 

Average free energy:
 -4.87888888889
 

Average covariation:
 0.395424836601
 

Average basepair probability:
 0.62037640645
 

Canonical basepairs:
 NA
 

Sequence and structure consensus for RNAalifold 
umaRRRMRCUKCURCCBRMMGYUSGUUUYMCAKGSUGGYWUKKSMscguaURUCURWMYWUKUCWCURUdSYAGYWCCAUKYRAAAYYRR
YRUUGSYVGKGWcAAKVMCWSCcasmgcu

...............((((.((((((((((.(((...........................................))).)))))))))
).)))).......................


The alignment colored using colorrna.pl of the Vienna package 

Cluster tree of the methods Tree

Table