Webserver for Aligning structural RNAs

Results

You can download the results in the following formats: fasta clustal stockholm col 


 
 RNAalifold 


 CPU time:
 .16
 

Average sequence ID:
 0.345782356729
 

Average free energy:
 -5.93166666667
 

Average covariation:
 0.329824561404
 

Average basepair probability:
 0.538758052989
 

Canonical basepairs:
 NA
 

Sequence and structure consensus for RNAalifold 
gSMBMRKGYYKYSMKKUSUCUKUMUSKCWAYWBKYGMHKAUGYGRUGYDMHBRCWCASYCRUACAGBRVKYGSWGRSRBRRMRWCACRRS
RGARMMMGKYMCMRgc

........(((((........((((((((.(((.(((............................))).))).))))))))........)
))))............


The alignment colored using colorrna.pl of the Vienna package 

Cluster tree of the methods Tree

Table