Webserver for Aligning structural RNAs

Results

You can download the results in the following formats: fasta clustal stockholm col
RNASampler
CPU time: 1495.86
Average sequence ID: 0.67174935307
Average free energy: -24.6792307692
Average covariation: -0.0789655172414
Average basepair probability: 0.691333236714
Canonical basepairs: NA

Sequence and structure consensus for RNASampler
aAGAAGAUCUCAKGCUGUGACCCUCYAGacuskRRAGGGAAGCRCUUUCUguukGUUGUCUGAAAGAAAASAAMGYGCUUCCYUUuasmK uUYAGAGKGUUACcYSUUUGAGAAAAGCAACguuug
................(((((((((((((.....((((((((((((((((...................))))))))))))))))..... ))))))))))))).......................

The alignment colored using colorrna.pl of the Vienna package

Cluster tree of the methods Tree

Table