Webserver for Aligning structural RNAs

Results

You can download the results in the following formats: fasta clustal stockholm col
FoldalignM
CPU time: 48.71
Average sequence ID: 0.354880921225
Average free energy: -30.8777777778
Average covariation: 0.711182336182
Average basepair probability: 0.725176712516
Canonical basepairs: NA

Sequence and structure consensus for FoldalignM
MVAGWCMBCKSYUGCCCKGKKGRRKGKAGKWRKWUGKUYURUUKKUKKGGSRGUSAYWYYSCCCMCWURARGARRAYAMYWMWMCMWCYU AYYBYYYYSMCCKkGhgK
..((.......))..(((((((((.(((((((((((((((((((((.(((((((...)))))))..........)))))))))))))))) ))))))))))))).)...

The alignment colored using colorrna.pl of the Vienna package

Cluster tree of the methods Tree

Table