Webserver for Aligning structural RNAs

Results

You can download the results in the following formats: fasta clustal stockholm col
LaRA
CPU time: 112.00
Average sequence ID: 0.42174796748
Average free energy: -19.5422222222
Average covariation: 0.530208333333
Average basepair probability: 0.850591536835
Canonical basepairs: NA

Sequence and structure consensus for LaRA
MMMWHCwRCyhGKGYCCHKBSKGARUGWRGUAGUAGGUUGURUWGUUKURGgGGYHGKRWWYYYSMCCYsdmYYRGGAGAUAACUAYACA AYCUACUGCCUUYYYKMMAGWGGyur
...........................((((((((((((((((((((..................................))))))))) )))))))))))...............

The alignment colored using colorrna.pl of the Vienna package

Cluster tree of the methods Tree

Table