Webserver for Aligning structural RNAs

Results

You can download the results in the following formats: fasta clustal stockholm col
MASTR
CPU time: 174.82
Average sequence ID: 0.571050542472
Average free energy: -30.7033333333
Average covariation: 0.158249158249
Average basepair probability: 0.72039533799
Canonical basepairs: NA

Sequence and structure consensus for MASTR
MMMWYCWSBKCMYYSYRGGVUGAGGUAGUAGGUUGUAYAGUUKKRGGGYMgkGUSAYWYURCCCCVWYYAGRAGAUAACUAUACAAYCUA CUGCCUUYCCURRSgugru
..............((((((.(((((((((((((((((((((...(((((..(.....))))))............)))))))))))))) )))))))))))))......

The alignment colored using colorrna.pl of the Vienna package

Cluster tree of the methods Tree

Table