Webserver for Aligning structural RNAs

Results

You can download the results in the following formats: fasta clustal stockholm col
RNASampler
CPU time: 132.34
Average sequence ID: 0.599843178254
Average free energy: -37.8011111111
Average covariation: 0.171428571429
Average basepair probability: 0.794295853248
Canonical basepairs: NA

Sequence and structure consensus for RNASampler
crMSAYYSDCYKCMYYSYRGGVUGAGGUAGUAGGUUGUAYAGUUgKURGGGYcWGKGAUHYYagRCCCCScWYYAGGAGAUAACUAUACA AYCUACUGYCUUYCCURASGukghug
..............((((((((.(((((((((((((((((((((..((((((............))))))...........))))))))) ))))))))))))))))))))......

The alignment colored using colorrna.pl of the Vienna package

Cluster tree of the methods Tree

Table