Webserver for Aligning structural RNAs

Results

You can download the results in the following formats: fasta clustal stockholm col
RNAalifold
CPU time: .10
Average sequence ID: 0.462643678161
Average free energy: -13.17
Average covariation: 0.0958333333333
Average basepair probability: 0.503923725834
Canonical basepairs: NA

Sequence and structure consensus for RNAalifold
kKMRAUAUBUCUUUCUGCUYUCAGMUUCUUURCAKUGCKGMCUUGUKGCAUAURRAUCAAGCASCAUUGUACAGGGMUAUSAARGCAYYR AGACYUGKCYWCgyacca
.........((((((((((((....((((.((((((((((.((((............)))))))))))))).)))).....))))))))) )))...............

The alignment colored using colorrna.pl of the Vienna package

Cluster tree of the methods Tree

Table