Webserver for Aligning structural RNAs

Results

You can download the results in the following formats: fasta clustal stockholm col
RNASampler
CPU time: 48.99
Average sequence ID: 0.38496791934
Average free energy: -27.368
Average covariation: 0.590909090909
Average basepair probability: 0.743771597787
Canonical basepairs: NA

Sequence and structure consensus for RNASampler
auRGGAkDMKUCUYWBUKCUYYgayWCAGCUUCUKYACAGUGCUGCCUKGauWRGMAUCURGAWCMAGCAGCWUUGURCAGGGCUwABAA RASAWcagcaYYGAGAMYKGUYCHYGY
...(((....(((((.((((((.....(((((...(((((((((((.(((..............))))))))))))))..)))))....) )))))......)))))....)))....

The alignment colored using colorrna.pl of the Vienna package

Cluster tree of the methods Tree

Table