Webserver for Aligning structural RNAs

Results

You can download the results in the following formats: fasta clustal stockholm col
MASTR
CPU time: 62.78
Average sequence ID: 0.363753213368
Average free energy: -35.9316666667
Average covariation: 0.549774774775
Average basepair probability: 0.762001138005
Canonical basepairs: NA

Sequence and structure consensus for MASTR
KYWYKWMSRKYKUCYWYHYAKWCYCYRKWKAYCCKARYUUGUGWDRUWUAUKYUGURAWRUSACARRUYMGRMUCWWGGGRVMURKGUGG WYGRBMUMAARMMU
((.....((((((((((((((.((((.(((((((((((((((((................))))))))))))))))))))).)))))))) )))))).....)).

The alignment colored using colorrna.pl of the Vienna package

Cluster tree of the methods Tree

Table