Webserver for Aligning structural RNAs

Results

You can download the results in the following formats: fasta clustal stockholm col
RNAalifold
CPU time: .07
Average sequence ID: 0.390891840607
Average free energy: -9.155
Average covariation: 0.306770833333
Average basepair probability: 0.643184755533
Canonical basepairs: NA

Sequence and structure consensus for RNAalifold
rUCWUWYYGKSYUCYWYMYAKWCCYUGUAGRYCCKRAYUUGUGAKRWDUWYYUKURWWRUCcACRRDUYMGRYUCUWGGRRRMURKGURG UYGVRCWYAWRCAYucacagcu
......................(((...((((.(((((((((....................))))))))).)))).))).......... ......................

The alignment colored using colorrna.pl of the Vienna package

Cluster tree of the methods Tree

Table