Webserver for Aligning structural RNAs

Results

You can download the results in the following formats: fasta clustal stockholm col
FoldalignM
CPU time: 77.51
Average sequence ID: 0.270981138605
Average free energy: -40.0572727273
Average covariation: 0.787142857143
Average basepair probability: 0.757686289918
Canonical basepairs: NA

Sequence and structure consensus for FoldalignM
RMRMMSHGSkSYSYSKMSSKCWWMHAWWWMWAWYARDWWWYRCkKUGUGRRWYSKRAYWSRMRWAUWYUCDYRKWWUWRyRWHSCSGGMS GSURSYMYMCDRMCCAM
.......((.(((((((((((.((((((((((..(((((((((.(..((........))))))))))))..)))))))).)).))))))) )).))))..........

The alignment colored using colorrna.pl of the Vienna package

Cluster tree of the methods Tree

Table