Webserver for Aligning structural RNAs

Results

You can download the results in the following formats: fasta clustal stockholm col
RNASampler
CPU time: 243.44
Average sequence ID: 0.295371900826
Average free energy: -30.3536363636
Average covariation: 0.729383116883
Average basepair probability: 0.783025688778
Canonical basepairs: NA

Sequence and structure consensus for RNASampler
usSCAMMRRCKGSKCVVCGGSMycumRWHSHAUWRMUYarYWRKAUWGKYWsuSUGUGAAYYbKRARWDDMCWRUWYUrsYSRKYAAUDR WcubSYGSRCCGSKVagcrCGSYMHUGWVWCAAC
..............((((((((......((((((((((...((((((((((.................))))))))))...))))))))) )......))))))))...................

The alignment colored using colorrna.pl of the Vienna package

Cluster tree of the methods Tree

Table