Webserver for Aligning structural RNAs

Results

You can download the results in the following formats: fasta clustal stockholm col
FoldalignM
CPU time: 93.03
Average sequence ID: 0.244732165524
Average free energy: -23.8488888889
Average covariation: 0.818713450292
Average basepair probability: 0.727641171235
Canonical basepairs: NA

Sequence and structure consensus for FoldalignM
YURAAMCASYYyBYYCYcRKBMGSKUUUYHCAMWUUSWSYYKCAVCAKUURUAYMKUUWYCKWSBYRGCCCMAUyYYAWVAWAMSbCKYH UKSSRWKWRRACMrAUCmYAyGsC
(..(....(((.(((((.((((((((((((.((((((((((..(((.(((.......)).)..))))))))))).)).))))))).)))) )))))).)))........)..)..

The alignment colored using colorrna.pl of the Vienna package

Cluster tree of the methods Tree

Table