Webserver for Aligning structural RNAs

Results

You can download the results in the following formats: fasta clustal stockholm col 


 
 RNAforester 


 CPU time:
 1.87
 

Average sequence ID:
 0.147395928847
 

Average free energy:
 17.3361538462
 

Average covariation:
 -0.271916329285
 

Average basepair probability:
 0.148463336439
 

Canonical basepairs:
 NA
 

Sequence and structure consensus for RNAforester 
rawwMrwuaSgAgYyCGuRKwCUmVcrckkrsacCucammksgmugWugygaagacusmgugaaaauKGGuSWgmRYgRucuWSHvSMYw
GMYaKYkSuusgmcugwcgwbaGcrysamgsagWWWkuaVGWYACMRcMMgYYrGCwcKYAYcygGdKRWgSWcKYRcgyyucugagGcW
UcSUcWhGYYgYHukwRGRKyCurMhvkrmksmrkMaaawvyKmymasuaGGWYAgMRwuRyw

.........((..((.(((((.((.(.(((((..(((((......)).)))....))))).).....((((.((.(((....(((.(((.
(((.((.(..(.(((.(.(......)).)))...((...(((........)))..)..).)...)).)).)).))).)..........))
.)).).))).))..)..)).).).).....(((........)))....)))))).........


The alignment colored using colorrna.pl of the Vienna package 

Cluster tree of the methods Tree

Table