Webserver for Aligning structural RNAs

Results

You can download the results in the following formats: fasta clustal stockholm col
LaRA
CPU time: 1420.00
Average sequence ID: 0.622617843415
Average free energy: -7.84677419355
Average covariation: 0.155913978495
Average basepair probability: 0.827872912553
Canonical basepairs: NA

Sequence and structure consensus for LaRA
aaGAAGAcUCUCAKGwuCUguGUGACCCsUCYAsGAGGyaaGAAGCRCUaUUCUGuuUUGUCUGAmAAGAAAAGAAMcGYGCUUCaCYUb kUUAGAGKGUUACkYSUyUUGAGAAAcAGChAACrwyua
.............................((((..(((...((.((((..............................)))).)).))). ..)))).................................

The alignment colored using colorrna.pl of the Vienna package

Cluster tree of the methods Tree

Table