Webserver for Aligning structural RNAs

Results

You can download the results in the following formats: fasta clustal stockholm col
RNAalifold
CPU time: .06
Average sequence ID: 0.345776031434
Average free energy: -2.87625
Average covariation: 0.225961538462
Average basepair probability: 0.654964421324
Canonical basepairs: NA

Sequence and structure consensus for RNAalifold
uMARRRMRCUKCURSCYRMAGYURGUUUYACAKGSUGGYWUSkSASMsumURUCURUAYMUUUMMSURUbSYARHWCMAUKYMAAAYYRR YMYUrSRWAGKRYARRRMYWGCyagcgcu
....................((((((((((.(((...........................................))).))))))))) )............................

The alignment colored using colorrna.pl of the Vienna package

Cluster tree of the methods Tree

Table