Webserver for Aligning structural RNAs

Results

You can download the results in the following formats: fasta clustal stockholm col
RNASampler
CPU time: 226.96
Average sequence ID: 0.544197737746
Average free energy: -17.384
Average covariation: 0.281704980843
Average basepair probability: 0.698171858451
Canonical basepairs: NA

Sequence and structure consensus for RNASampler
auYARMCAUGYuamUGUSKGYRGURCCCUACUCAGRARRGUGHCARUCAYwKUAKAWYwaUAMAUKURAYUGACMCYUYUSUGAGURGAG UAASGCWYRMcMCRWRYRcmhrYAA
........(((....((((((......(((((((((((((...(((((((...............)))))))...))))))))))))).. ....)))))).....))).......

The alignment colored using colorrna.pl of the Vienna package

Cluster tree of the methods Tree

Table