Webserver for Aligning structural RNAs

Results

You can download the results in the following formats: fasta clustal stockholm col
RNASampler
CPU time: 31.49
Average sequence ID: 0.239786856128
Average free energy: -23.72
Average covariation: 1.01057692308
Average basepair probability: 0.846733095946
Canonical basepairs: NA

Sequence and structure consensus for RNASampler
rHVRWAWGGCcMMMWGGCGUGcaSAWGCYAGGKgukrYAAYSUUKcyYKRRKUKAYRGAUYUYRCAHKUGgMVUKCMRCGRKRguSCCWA MCCURGUcuYWSCAURCCHSaGGKCYaMBHHY
.......(((...((((((((.....(((((((.......(((((..........(((.........)))........)))))....... ))))))).....))))))))...)))......

The alignment colored using colorrna.pl of the Vienna package

Cluster tree of the methods Tree

Table