Webserver for Aligning structural RNAs

Results

You can download the results in the following formats: fasta clustal stockholm col 


 
 RNAforester 


 CPU time:
 0.27
 

Average sequence ID:
 0.307332293292
 

Average free energy:
 -32.355
 

Average covariation:
 0.540598290598
 

Average basepair probability:
 0.716178608658
 

Canonical basepairs:
 NA
 

Sequence and structure consensus for RNAforester 
MKMCAKRUYWCUcCWaKKUCUCURUMUSUYWWYaMUUaKaMUWYRHDDWWHWWMYKCWCACYcHDURWAKWRRKYAHRGgASAKRHAGWG
AcMHDGAGAMSMMagSMWRCCgDc

.....(((((((.(((.((((((((((((((...((((..((((((((.(((....)))...))))))))))))...).)))))))))))
.)))))))))....))).......


The alignment colored using colorrna.pl of the Vienna package 

Cluster tree of the methods Tree

Table