Webserver for Aligning structural RNAs

Results

You can download the results in the following formats: fasta clustal stockholm col 


 
 RNASampler 


 CPU time:
 10.90
 

Average sequence ID:
 0.348228043143
 

Average free energy:
 -42.995
 

Average covariation:
 0.847446236559
 

Average basepair probability:
 0.868253863869
 

Canonical basepairs:
 NA
 

Sequence and structure consensus for RNASampler 
agKSHYMMWSYYKYYMUGUucuSUMUGKCWYUCWRYWMUWRYWMWRUDDWDMWWMKKCUCASaYYAUWKWRYWRKcMCDDRGRGMCAKDR
cgcACAKRRSRRcMSMSMCAKCSDc

..........(((((((((...((((((((((.....((((((((((((..............)))))))))))).....))))))))))
...))))))))).............


The alignment colored using colorrna.pl of the Vienna package 

Cluster tree of the methods Tree

Table