Webserver for Aligning structural RNAs

Results

You can download the results in the following formats: fasta clustal stockholm col 


 
 CMfinder 


 CPU time:
 7.13
 

Average sequence ID:
 0.40346027846
 

Average free energy:
 8.61285714286
 

Average covariation:
 0.0369352869353
 

Average basepair probability:
 0.449192676141
 

Canonical basepairs:
 NA
 

Sequence and structure consensus for CMfinder 
uuuwKWRYUBWSHGDYRGYYMCWGUMAACAUYCWWYRcCUGUCGGUGRGYUKKRRRRMssURYRRAKgMRRCYCACHGACSGWUGWWURY
WSCcUGCGGMCYUKVCAMHYGHCAwcc

..........(.......((.((.....((.((.((....(((....((((..................))))....))).)).)).)).
....)).))..)...............


The alignment colored using colorrna.pl of the Vienna package 

Cluster tree of the methods Tree

Table