Webserver for Aligning structural RNAs

Results

You can download the results in the following formats: fasta clustal stockholm col 


 
 FoldalignM 


 CPU time:
 98.47
 

Average sequence ID:
 0.292812400467
 

Average free energy:
 -17.1835714286
 

Average covariation:
 0.756766381766
 

Average basepair probability:
 0.779965623654
 

Canonical basepairs:
 NA
 

Sequence and structure consensus for FoldalignM 
UUHURYCRRRGSUYYKSYaWCKRWAWWYHWHCYYSWCKGKKRRGYKUKRRGWCWBARGRMRRSCUYKCRGYVGgKWDRUWKRHMCYKKSG
GCCUGRCMAYCSWMH

..........(..(((((..(..(((((((((...((((((((((.(.............))))))))))).).))))))))..).))))
).)............


The alignment colored using colorrna.pl of the Vienna package 

Cluster tree of the methods Tree

Table