Webserver for Aligning structural RNAs

Results

You can download the results in the following formats: fasta clustal stockholm col 


 
 RNAforester 


 CPU time:
 0.45
 

Average sequence ID:
 0.265466448445
 

Average free energy:
 -0.16
 

Average covariation:
 0.264046167247
 

Average basepair probability:
 0.572723565367
 

Canonical basepairs:
 NA
 

Sequence and structure consensus for RNAforester 
UVRWMMYrCGCYacgUUCHRcRMWRSaWGWYYYHRMRYKGYRSKUsYMMABUcKUAWYMUYKWYrWSWVgKRGcYgYAMMRcYwUYAuAM
RWMHSyaYVuWYaYRuGRAGGaMsRAMVMMKCUsu

....((..((((..(.((((.(((((.(((((((((((((((((..(((((.(.((.....)))..)).))))..))))).)).)).)))
))))..)).)).))).)))).).)).)).......


The alignment colored using colorrna.pl of the Vienna package 

Cluster tree of the methods Tree

Table