Webserver for Aligning structural RNAs

Results

You can download the results in the following formats: fasta clustal stockholm col 


 
 RNAforester 


 CPU time:
 0.59
 

Average sequence ID:
 0.527887207132
 

Average free energy:
 -27.16
 

Average covariation:
 0.173219373219
 

Average basepair probability:
 0.710589583969
 

Canonical basepairs:
 NA
 

Sequence and structure consensus for RNAforester 
YuMAsMCAUGYYGKSKGKmRGURCCCUACUCAGRARRGyUGMCARUCauAYaGUAUMAHUAMAUGUGAYUGACACCYUYYKuGAGURGAG
UAASguSCMUVMyaMRYaAYACGWcwy

.......(((.((((((((..(((.(((((((((((((.((((((((..((.((........))))))))))))))))))).)))))).)
))...)))).))..))).)).......


The alignment colored using colorrna.pl of the Vienna package 

Cluster tree of the methods Tree

Table