Webserver for Aligning structural RNAs

Results

You can download the results in the following formats: fasta clustal stockholm col 


 
 RNAforester 


 CPU time:
 1.19
 

Average sequence ID:
 0.404548923828
 

Average free energy:
 -2.1736
 

Average covariation:
 -0.1003125
 

Average basepair probability:
 0.530250947067
 

Canonical basepairs:
 NA
 

Sequence and structure consensus for RNAforester 
sRUaCKCuMUScKUUgGGUAcCYUgGaARRRGARGkUURYCCucBUGSUDcKaGUcUYrSkScKcUuUWUUURUGArYGcRAAcYcAUAM
CMaGGGAMrAACaYWCUUUUYSAGUAYcCAaAWsYCSYsCCYwgg

...(.(......(((.((((.((..(.((((((((.((((((.(.(((.(.(.((.(((..(.((.........)).)).)).).))).)
).))))).)))).)))))))).)))).))).).)...).).....


The alignment colored using colorrna.pl of the Vienna package 

Cluster tree of the methods Tree

Table